Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g083080.3 Solanum lycopersicum HOM05D014815 ORTHO05D017127 1.5e-147 526.2 260 100.0
Solyc10g083100.1 Solanum lycopersicum HOM05D014815 ORTHO05D017127 1.2e-112 410.2 254 81.5
PGSC0003DMG400040827 Solanum tuberosum HOM05D014815 ORTHO05D017127 1.2e-93 347.1 243 74.1
Solyc10g083070.1 Solanum lycopersicum HOM05D014815 ORTHO05D017127 5.8e-80 301.6 323 54.8
Solyc10g083090.1 Solanum lycopersicum HOM05D014815 ORTHO05D017127 4.2e-78 295.4 323 54.5
PGSC0003DMG400043673 Solanum tuberosum HOM05D014815 ORTHO05D017127 1.4e-73 280.4 335 50.4
PGSC0003DMG400045504 Solanum tuberosum HOM05D014815 ORTHO05D017127 1.1e-65 254.2 149 84.6
Solyc10g082060.1 Solanum lycopersicum HOM05D014815 ORTHO05D017127 4.4e-59 232.3 249 57.4
PGSC0003DMG400045485 Solanum tuberosum HOM05D014815 ORTHO05D017127 6.3e-42 175.3 190 55.3
PGSC0003DMG400037114 Solanum tuberosum HOM05D014815 ORTHO05D017127 3.7e-34 149.4 190 50.0
CAN.G835.7 Capsicum annuum HOM05D017354 ORTHO05D018853 9.5e-30 134.8 319 36.7
CAN.G598.2 Capsicum annuum HOM05D017354 ORTHO05D018853 2.8e-29 133.3 330 37.3
Nitab4.5_0004277g0030 Nicotiana tabacum HOM05D001000 ORTHO05D001896 3.3e-14 83.2 210 34.3
Peaxi162Scf01662g00005 Petunia axillaris HOM05D001000 ORTHO05D001896 9.8e-11 71.6 120 45.8
Solyc01g007810.1 Solanum lycopersicum HOM05D001000 ORTHO05D001896 1.7e-10 70.9 270 27.8
Sopen01g003350 Solanum pennellii HOM05D001000 ORTHO05D001896 2.9e-10 70.1 276 27.5
THA.LOC104826961 Tarenaya hassleriana HOM05D001000 ORTHO05D001896 3.7e-10 69.7 259 30.9
PGSC0003DMG400016385 Solanum tuberosum HOM05D001000 ORTHO05D001896 9.2e-09 65.1 240 28.3
Lj5g0023342 Lotus japonicus HOM05D001000 ORTHO05D001896 2.1e-08 63.9 266 27.8
CAN.G835.13 Capsicum annuum HOM05D017354 ORTHO05D018853 4.6e-08 62.8 155 33.5
DCAR_013428 Daucus carota HOM05D001000 ORTHO05D001896 4.6e-08 62.8 241 29.0
Nitab4.5_0003787g0020 Nicotiana tabacum HOM05D001000 ORTHO05D001896 4.6e-08 62.8 238 29.4
Lalb_Chr21g0309071 Lupinus albus HOM05D001000 ORTHO05D001896 6.0e-08 62.4 251 29.1
Duzib128G0514 Durio zibethinus HOM05D001000 ORTHO05D001896 7.8e-08 62.0 84 44.0
TPR.G26283 Trifolium pratense HOM05D001000 ORTHO05D001896 1.0e-07 61.6 239 31.0
Oeu033284.1 Olea europaea HOM05D001000 ORTHO05D001896 1.7e-07 60.8 125 36.0
TPR.G20718 Trifolium pratense HOM05D001000 ORTHO05D001896 1.7e-07 60.8 258 27.5
ClCG05G021880 Citrullus lanatus HOM05D001000 ORTHO05D001896 2.3e-07 60.5 224 30.8
Nitab4.5_0001047g0050 Nicotiana tabacum HOM05D001000 ORTHO05D001896 3.0e-07 60.1 238 29.0
Aqoxy4G02690 Aquilegia oxysepala HOM05D001000 ORTHO05D001896 3.9e-07 59.7 250 26.8
Lsat_1_v5_gn_2_105781 Lactuca sativa HOM05D001000 ORTHO05D010404 3.9e-07 59.7 99 38.4
Sed0016928 Sechium edule HOM05D001000 ORTHO05D001896 5.0e-07 59.3 225 28.9
DCAR_016924 Daucus carota HOM05D001000 ORTHO05D001896 8.6e-07 58.5 241 26.1
CANSAT56G4195 Cannabis sativa HOM05D001000 ORTHO05D001896 1.1e-06 58.2 111 40.5
Ca_09039_v3 Cicer arietinum L. HOM05D001000 ORTHO05D001896 1.1e-06 58.2 211 28.4
Psat3g030320 Pisum sativum HOM05D001000 ORTHO05D001896 1.1e-06 58.2 218 27.5
PGSC0003DMG400007601 Solanum tuberosum HOM05D001000 ORTHO05D001896 1.1e-06 58.2 237 29.5
Psat6g230280 Pisum sativum HOM05D001000 ORTHO05D001896 1.5e-06 57.8 119 37.8
QL04p047041 Quercus lobata HOM05D001000 ORTHO05D001896 1.5e-06 57.8 247 28.3
Solyc11g006670.1 Solanum lycopersicum HOM05D001000 ORTHO05D001896 2.5e-06 57.0 81 45.7
Sopen11g002600 Solanum pennellii HOM05D001000 ORTHO05D001896 2.5e-06 57.0 115 40.0
MELO3C012340.2 Cucumis melo HOM05D001000 ORTHO05D001896 3.3e-06 56.6 229 28.4
Lsat_1_v5_gn_2_105761 Lactuca sativa HOM05D001000 ORTHO05D001896 3.3e-06 56.6 101 39.6
Phvul.001G194000 Phaseolus vulgaris HOM05D001000 ORTHO05D001896 3.3e-06 56.6 99 39.4
MD12G1034200 Malus domestica HOM05D001000 ORTHO05D001896 5.6e-06 55.8 87 37.9
MD14G1035600 Malus domestica HOM05D001000 ORTHO05D001896 5.6e-06 55.8 86 39.5
Medtr1g111640 Medicago truncatula HOM05D001000 ORTHO05D001896 5.6e-06 55.8 214 28.0
FAN05G4507 Fragaria x ananassa HOM05D001000 ORTHO05D001896 9.5e-06 55.1 250 27.6
Manes.08G031100 Manihot esculenta HOM05D001000 ORTHO05D001896 9.5e-06 55.1 127 36.2
Sed0011934 Sechium edule HOM05D001000 ORTHO05D001896 9.5e-06 55.1 75 41.3


User provided reference genes

Program Settings