Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.1e-135 485.7 246 100.0
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 1.7e-134 482.6 246 99.2
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 7.6e-122 440.7 248 91.1
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 4.2e-96 355.1 251 73.7
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.7e-76 290.0 239 64.0
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.0e-70 268.9 231 62.3
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.2e-69 267.3 255 56.1
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.4e-67 259.6 253 55.3
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 5.0e-65 251.9 251 54.2
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 7.3e-64 248.1 243 55.6
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.2e-61 240.7 245 55.5
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 3.7e-60 235.7 276 47.8
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 1.5e-56 223.8 253 49.8
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 1.3e-52 210.7 246 48.4
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 5.4e-51 205.3 284 43.3
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.6e-47 193.7 253 43.9
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 2.1e-47 193.4 270 44.1
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 2.3e-46 189.9 267 43.4
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 3.3e-40 169.5 256 39.8
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 1.4e-35 154.1 255 40.8
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 2.4e-35 153.3 240 40.0
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 4.1e-35 152.5 245 38.0
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 1.2e-34 151.0 244 37.3
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 1.3e-33 147.5 244 38.5
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 1.3e-33 147.5 257 37.0
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.0e-33 146.4 271 39.5
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 3.9e-33 146.0 253 39.9
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 6.6e-33 145.2 248 37.9
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 1.1e-32 144.4 246 39.0
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 1.9e-32 143.7 246 37.4
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 2.8e-31 139.8 245 39.2
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.8e-30 137.1 142 50.0
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 1.8e-30 137.1 240 38.3
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.4e-30 136.7 238 37.4
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 6.9e-30 135.2 247 34.8
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 3.4e-29 132.9 245 37.1
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 3.4e-29 132.9 247 36.8
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 5.8e-29 132.1 255 33.7
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 5.8e-29 132.1 245 36.7
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 5.8e-29 132.1 242 36.8
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 7.6e-29 131.7 240 38.3
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 7.6e-29 131.7 244 34.4
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.9e-28 129.8 260 36.5
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 4.9e-28 129.0 264 34.8
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 8.4e-28 128.3 243 35.8
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 1.1e-27 127.9 251 36.7
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.2e-27 126.3 238 35.7
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.2e-27 125.9 238 35.3
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 4.2e-27 125.9 260 35.0
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.1e-27 125.2 243 35.4
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 2.1e-26 123.6 238 35.3
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.5e-26 122.9 238 35.3
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.3e-25 120.9 255 34.9
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.7e-25 120.6 238 34.5
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 1.7e-25 120.6 257 34.2
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 2.3e-25 120.2 249 36.1
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 2.3e-25 120.2 238 33.6
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 8.7e-25 118.2 244 34.8
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 1.1e-24 117.9 253 34.4
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 1.1e-24 117.9 236 35.6
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 2.5e-24 116.7 250 30.0
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 2.1e-23 113.6 251 32.7
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 2.8e-23 113.2 159 39.6
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 2.4e-22 110.2 221 33.0
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.5e-21 107.5 258 31.8
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.5e-21 107.5 246 30.9
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.4e-21 106.3 146 43.8
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 4.5e-21 105.9 237 33.8
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 4.5e-21 105.9 255 32.2
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 3.8e-20 102.8 266 29.3
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 6.4e-20 102.1 131 42.0
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 6.4e-20 102.1 266 28.6
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 1.1e-19 101.3 256 30.5
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 2.4e-19 100.1 248 28.6
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 4.2e-19 99.4 246 30.1
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 4.2e-19 99.4 245 30.2
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 4.2e-19 99.4 249 31.7
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 9.3e-19 98.2 259 30.9
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 2.7e-18 96.7 250 33.2
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 2.7e-18 96.7 244 29.9
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 6.0e-18 95.5 233 29.2
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 1.8e-17 94.0 247 29.6
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 3.0e-17 93.2 276 27.2
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 5.1e-17 92.4 244 29.5
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 5.1e-17 92.4 246 28.5
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 8.7e-17 91.7 160 41.9
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 8.7e-17 91.7 242 28.1
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 8.7e-17 91.7 282 30.5
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 9.6e-16 88.2 233 26.6
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 4.8e-15 85.9 264 27.7
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 6.2e-15 85.5 261 28.4
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.5e-13 80.9 112 35.7
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 2.6e-13 80.1 119 37.0
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 3.4e-13 79.7 101 41.6
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 5.8e-13 79.0 112 37.5
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 1.3e-12 77.8 104 37.5
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 2.2e-12 77.0 242 26.0
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.1e-11 74.7 243 26.7
Zm00001eb065580 Zea mays HOM05D007097 ORTHO05D008131 4.2e-11 72.8 259 25.9
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 5.5e-11 72.4 252 29.4
Oeu006273.1 Olea europaea HOM05D007097 ORTHO05D008131 7.1e-11 72.0 120 40.0
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 1.2e-10 71.2 114 35.1
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 4.6e-10 69.3 101 32.7
Zm00001eb434190 Zea mays HOM05D007097 ORTHO05D008131 6.0e-10 68.9 249 25.3
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.3e-09 67.8 54 53.7
Actinidia03892 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.1e-08 64.7 107 35.5
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 2.5e-08 63.5 251 25.5
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 3.3e-08 63.2 231 30.3
Sc20g0006720 Simmondsia chinensis HOM05D007097 ORTHO05D008131 5.6e-08 62.4 240 24.2
Nn3g18010 Nelumbo nucifera HOM05D007097 ORTHO05D008131 4.0e-06 56.2 79 39.2


User provided reference genes

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