Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g081750.1 Solanum lycopersicum HOM05D006703 ORTHO05D008389 2.9e-108 395.2 195 100.0
Sopen10g032260 Solanum pennellii HOM05D006703 ORTHO05D008389 1.3e-103 379.8 195 97.4
PGSC0003DMG400028230 Solanum tuberosum HOM05D006703 ORTHO05D008389 5.5e-99 364.4 195 92.8
Nitab4.5_0000721g0180 Nicotiana tabacum HOM05D006703 ORTHO05D008389 1.1e-86 323.6 200 82.5
Nitab4.5_0001918g0020 Nicotiana tabacum HOM05D006703 ORTHO05D008389 7.7e-85 317.4 200 80.0
Peaxi162Scf00203g00910 Petunia axillaris HOM05D006703 ORTHO05D008389 1.6e-69 266.5 194 72.2
Actinidia37767 Actinidia chinensis HOM05D006703 ORTHO05D008389 1.7e-52 209.9 203 56.7
MSTRG.19329 Avicennia marina HOM05D006703 ORTHO05D008389 1.6e-50 203.4 200 57.0
ECA233G5710 Erigeron canadensis HOM05D006703 ORTHO05D008389 6.8e-49 198.0 213 51.2
Lj1A1058G53 Lonicera japonica HOM05D006703 ORTHO05D008389 6.8e-49 198.0 201 53.7
HanXRQChr02g0052921 Helianthus annuus HOM05D006703 ORTHO05D008389 4.4e-48 195.3 203 53.2
SGA_v2.0_scaffold31G12818 Striga asiatica HOM05D006703 ORTHO05D008389 1.7e-47 193.4 200 55.5
Oeu020165.3 Olea europaea HOM05D006703 ORTHO05D008389 2.2e-47 193.0 245 45.3
DCAR_013453 Daucus carota HOM05D006703 ORTHO05D008389 4.9e-47 191.8 202 52.0
HanXRQChr13g0398671 Helianthus annuus HOM05D006703 ORTHO05D008389 4.9e-47 191.8 208 48.1
MELO3C009564.2 Cucumis melo HOM05D006703 ORTHO05D008389 6.4e-47 191.4 204 54.9
Hma1.2p1_0401F.1_g144790 Hydrangea macrophylla HOM05D006703 ORTHO05D008389 8.3e-47 191.0 206 54.9
Prupe.7G090900 Prunus persica HOM05D006703 ORTHO05D008389 5.4e-46 188.3 204 52.5
Sed0010784 Sechium edule HOM05D006703 ORTHO05D008389 5.4e-46 188.3 206 52.9
RcHm_v2.0_Chr3g0477171 Rosa chinensis HOM05D006703 ORTHO05D008389 9.2e-46 187.6 199 52.3
ClCG10G018080 Citrullus lanatus HOM05D006703 ORTHO05D008389 6.0e-45 184.9 202 50.5
AUR62030691 Chenopodium quinoa HOM05D006703 ORTHO05D008389 1.0e-44 184.1 204 51.0
RcHm_v2.0_Chr3g0477081 Rosa chinensis HOM05D006703 ORTHO05D008389 1.0e-44 184.1 204 51.5
MD12G1044300 Malus domestica HOM05D006703 ORTHO05D008389 1.3e-44 183.7 204 52.9
FAN05G3633 Fragaria x ananassa HOM05D006703 ORTHO05D008389 3.0e-44 182.6 204 49.5
Sed0006927 Sechium edule HOM05D006703 ORTHO05D008389 3.0e-44 182.6 202 52.0
FAN05G2374 Fragaria x ananassa HOM05D006703 ORTHO05D008389 3.9e-44 182.2 204 49.5
Rhsim03G0062400 Rhododendron simsii HOM05D006703 ORTHO05D008389 5.1e-44 181.8 206 50.5
MSTRG.26583 Avicennia marina HOM05D006703 ORTHO05D008389 6.6e-44 181.4 199 52.8
CsaV3_3G038210 Cucumis sativus L. HOM05D006703 ORTHO05D008389 1.9e-43 179.9 206 52.9
FAN09G4763 Fragaria x ananassa HOM05D006703 ORTHO05D008389 2.5e-43 179.5 204 49.0
QL07p026854 Quercus lobata HOM05D006703 ORTHO05D008389 2.5e-43 179.5 207 49.8
MD14G1043200 Malus domestica HOM05D006703 ORTHO05D008389 7.3e-43 177.9 205 51.2
Cfa020082 Carpinus fangiana HOM05D006703 ORTHO05D008389 1.2e-42 177.2 201 52.2
TWI77G0507 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 1.6e-42 176.8 203 46.8
Migut.J00741 Erythranthe guttata HOM05D006703 ORTHO05D008389 2.1e-42 176.4 206 51.5
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 2.8e-42 176.0 178 51.1
CANSAT64G1940 Cannabis sativa HOM05D006703 ORTHO05D008389 3.6e-42 175.6 203 48.3
Eucgr.K01914 Eucalyptus grandis HOM05D006703 ORTHO05D008389 3.6e-42 175.6 210 47.6
Nn2g14390 Nelumbo nucifera HOM05D006703 ORTHO05D008389 3.6e-42 175.6 188 50.5
CiPaw.10G019700 Carya illinoinensis HOM05D006703 ORTHO05D008389 4.7e-42 175.3 206 50.5
Hund14986 Selenicereus undatus HOM05D006703 ORTHO05D008389 8.1e-42 174.5 203 47.3
Atru.chr8.1299 Acer truncatum HOM05D006703 ORTHO05D008389 1.1e-41 174.1 174 52.3
FvH4_6g20830 Fragaria vesca HOM05D006703 ORTHO05D008389 1.1e-41 174.1 204 48.0
TWI74G0187 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 1.1e-41 174.1 211 46.0
FAN14G3264 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.8e-41 173.3 204 48.0
Haze_20110 Corylus avellana HOM05D006703 ORTHO05D008389 2.4e-41 172.9 200 49.0
EL10Ac5g11822 Beta vulgaris HOM05D006703 ORTHO05D008389 6.8e-41 171.4 203 48.8
CiPaw.09G023100 Carya illinoinensis HOM05D006703 ORTHO05D008389 6.8e-41 171.4 204 50.0
Cc06_g06870 Coffea canephora HOM05D006703 ORTHO05D008389 6.8e-41 171.4 232 46.1
Potri.016G066800 Populus trichocarpa HOM05D006703 ORTHO05D008389 6.8e-41 171.4 202 49.0
Duzib106G1644 Durio zibethinus HOM05D006703 ORTHO05D008389 8.9e-41 171.0 201 50.2
Sc22g0003150 Simmondsia chinensis HOM05D006703 ORTHO05D008389 8.9e-41 171.0 173 50.3
SGA_v2.0_scaffold392G50677 Striga asiatica HOM05D006703 ORTHO05D008389 3.4e-40 169.1 201 50.2
Thecc.05G108700 Theobroma cacao HOM05D006703 ORTHO05D008389 3.4e-40 169.1 202 49.0
Hund10833 Selenicereus undatus HOM05D006703 ORTHO05D008389 4.4e-40 168.7 203 48.3
Lalb_Chr01g0017771 Lupinus albus HOM05D006703 ORTHO05D008389 7.6e-40 167.9 204 47.1
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 9.9e-40 167.5 206 46.6
COL.COLO4_29515 Corchorus olitorius HOM05D006703 ORTHO05D008389 9.9e-40 167.5 200 49.5
Manes.08G036200 Manihot esculenta HOM05D006703 ORTHO05D008389 9.9e-40 167.5 204 45.6
Sabra16G0068200 Salix brachista HOM05D006703 ORTHO05D008389 9.9e-40 167.5 202 47.5
GSVIVG01022605001 Vitis vinifera HOM05D006703 ORTHO05D008389 1.7e-39 166.8 204 48.0
Manes.09G042800 Manihot esculenta HOM05D006703 ORTHO05D008389 3.8e-39 165.6 203 46.8
EL10Ac9g21006 Beta vulgaris HOM05D006703 ORTHO05D008389 1.1e-38 164.1 203 47.3
Gohir.D01G190000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 1.4e-38 163.7 201 49.3
Gohir.A01G200000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 1.9e-38 163.3 201 49.8
Gorai.002G233800 Gossypium raimondii HOM05D006703 ORTHO05D008389 2.4e-38 162.9 202 49.0
TPR.G34442 Trifolium pratense HOM05D006703 ORTHO05D008389 2.4e-38 162.9 214 45.8
PGR004G0398 Punica granatum HOM05D006703 ORTHO05D008389 4.1e-38 162.2 203 47.8
MBI05_g29094_MAGBIO Magnolia biondii HOM05D006703 ORTHO05D008389 5.4e-38 161.8 176 48.9
Duzib093G0046 Durio zibethinus HOM05D006703 ORTHO05D008389 7.1e-38 161.4 194 47.9
vmacro07494 Vaccinium macrocarpon HOM05D006703 ORTHO05D008389 9.2e-38 161.0 294 37.4
FAN02G3199 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.2e-37 160.6 161 54.0
Ca_09072_v3 Cicer arietinum L. HOM05D006703 ORTHO05D008389 3.5e-37 159.1 209 45.5
Lj1g0009334 Lotus japonicus HOM05D006703 ORTHO05D008389 1.0e-36 157.5 208 47.1
Medtr7g106660 Medicago truncatula HOM05D006703 ORTHO05D008389 1.5e-35 153.7 209 45.5
AUR62036335 Chenopodium quinoa HOM05D006703 ORTHO05D008389 7.3e-35 151.4 190 43.7
arahy.Tifrunner.gnm1.ann1.8DDT0E Arachis hypogaea HOM05D006703 ORTHO05D008389 9.6e-35 151.0 153 52.9
arahy.Tifrunner.gnm1.ann1.W58RTV Arachis hypogaea HOM05D006703 ORTHO05D008389 9.6e-35 151.0 153 52.9
Phvul.001G197500 Phaseolus vulgaris HOM05D006703 ORTHO05D008389 2.8e-34 149.4 201 45.3
CARHR130150 Cardamine hirsuta HOM05D006703 ORTHO05D008389 4.0e-33 145.6 204 42.2
Psat3g028120 Pisum sativum HOM05D006703 ORTHO05D008389 4.0e-33 145.6 207 44.4
AL4G32000 Arabidopsis lyrata HOM05D006703 ORTHO05D008389 6.9e-33 144.8 209 40.2
BolC4t27966H Brassica oleracea HOM05D006703 ORTHO05D008389 1.5e-32 143.7 215 41.4
Thhalv10017281m.g Eutrema salsugineum HOM05D006703 ORTHO05D008389 1.5e-32 143.7 209 42.6
A04p27380 Brassica napus HOM05D006703 ORTHO05D008389 2.6e-32 142.9 212 41.0
ATR0697G151 Amborella trichopoda HOM05D006703 ORTHO05D008389 3.4e-32 142.5 165 49.1
AT2G35900 Arabidopsis thaliana HOM05D006703 ORTHO05D008389 4.4e-32 142.1 209 39.2
BraA04t18236Z Brassica rapa HOM05D006703 ORTHO05D008389 4.4e-32 142.1 212 39.6
BcaC02g07656 Brassica carinata HOM05D006703 ORTHO05D008389 5.8e-32 141.7 212 41.5
PSO017G1234 Papaver somniferum HOM05D006703 ORTHO05D008389 5.8e-32 141.7 184 48.9
Os01g0771200 Oryza sativa ssp. japonica HOM05D006703 ORTHO05D008389 7.6e-32 141.4 162 46.9
BraA03t11234Z Brassica rapa HOM05D006703 ORTHO05D008389 1.7e-31 140.2 210 41.9
Glyma.03G204000 Glycine max HOM05D006703 ORTHO05D008389 1.7e-31 140.2 212 40.6
unitig_749.g14212 Utricularia gibba HOM05D006703 ORTHO05D008389 1.7e-31 140.2 147 55.1
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 4.9e-31 138.7 202 43.1
C04p64910 Brassica napus HOM05D006703 ORTHO05D008389 6.4e-31 138.3 212 40.6
A03p19820 Brassica napus HOM05D006703 ORTHO05D008389 1.1e-30 137.5 205 41.5
Zm00001eb151930 Zea mays HOM05D006703 ORTHO05D008389 1.1e-30 137.5 189 43.9
C03p23140 Brassica napus HOM05D006703 ORTHO05D008389 1.4e-30 137.1 205 41.0
Sp4g18150 Schrenkiella parvula HOM05D006703 ORTHO05D008389 1.4e-30 137.1 209 40.2
Carub.0004s1765 Capsella rubella HOM05D006703 ORTHO05D008389 3.2e-30 136.0 205 39.0
Aa31LG5G21040 Aethionema arabicum HOM05D006703 ORTHO05D008389 4.2e-30 135.6 210 40.5
CDE10G0766 Ceratophyllum demersum HOM05D006703 ORTHO05D008389 4.2e-30 135.6 123 51.2
Aqoxy1G00585 Aquilegia oxysepala HOM05D006703 ORTHO05D008389 7.1e-30 134.8 190 44.2
BcaC01g05692 Brassica carinata HOM05D006703 ORTHO05D008389 7.1e-30 134.8 204 41.2
BolC3t14715H Brassica oleracea HOM05D006703 ORTHO05D008389 7.1e-30 134.8 204 41.2
BcaB06g28891 Brassica carinata HOM05D006703 ORTHO05D008389 2.1e-29 133.3 211 39.3
THA.LOC104823512 Tarenaya hassleriana HOM05D006703 ORTHO05D008389 8.7e-28 127.9 186 40.9
Actinidia03970 Actinidia chinensis HOM05D006703 ORTHO05D008389 1.3e-26 124.0 178 46.1
Actinidia03862 Actinidia chinensis HOM05D006703 ORTHO05D008389 1.4e-25 120.6 125 56.0
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 1.8e-25 120.2 130 53.1
Oeu045018.1 Olea europaea HOM05D006703 ORTHO05D008389 3.9e-20 102.4 96 56.2
SHI28311 Sapria himalayana HOM05D006703 ORTHO05D008389 1.3e-10 70.9 109 40.4
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 2.8e-10 69.7 82 43.9
Dinv16712 Davidia involucrata HOM05D006703 ORTHO05D008389 4.0e-09 65.9 62 54.8
AagrBONN_evm.TU.Sc2ySwM_369.455 Anthoceros agrestis HOM05D006703 ORTHO05D008389 1.5e-08 63.9 171 35.1
SEGI_14783 Sequoiadendron giganteum HOM05D000064 ORTHO05D008389 1.0e-07 61.2 65 44.6
SEGI_41401 Sequoiadendron giganteum HOM05D006703 ORTHO05D008389 2.9e-07 59.7 38 57.9
Sc17g0001990 Simmondsia chinensis HOM05D006703 ORTHO05D008389 6.5e-07 58.5 61 45.9


User provided reference genes

Program Settings