Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 3.9e-132 474.9 260 100.0
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 7.5e-128 460.7 260 96.2
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 8.3e-127 457.2 260 93.1
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 1.3e-90 337.0 190 92.1
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 6.4e-87 324.7 193 86.5
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.3e-84 317.0 193 87.0
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.3e-83 312.4 183 88.5
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 1.6e-77 293.5 212 73.1
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.0e-76 290.8 217 71.0
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 1.0e-76 290.8 218 71.1
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 8.7e-76 287.7 210 73.8
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 9.7e-75 284.3 206 72.3
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 9.7e-75 284.3 206 72.3
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 1.6e-74 283.5 218 69.7
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 8.2e-74 281.2 209 70.8
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.4e-73 280.4 218 69.7
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 2.4e-73 279.6 212 68.4
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 4.1e-73 278.9 255 59.2
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 7.6e-72 274.6 211 69.2
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 7.6e-72 274.6 211 68.7
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 2.2e-71 273.1 217 66.4
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 2.9e-71 272.7 212 67.9
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 3.8e-71 272.3 211 67.3
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 6.5e-71 271.6 210 68.6
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 8.5e-71 271.2 212 68.9
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 9.3e-70 267.7 211 66.4
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 3.6e-69 265.8 229 61.6
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 3.6e-69 265.8 211 66.4
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 7.9e-69 264.6 208 66.8
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 1.3e-68 263.8 225 60.4
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.8e-68 263.5 219 63.5
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.3e-68 263.1 213 66.2
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.3e-68 263.1 243 60.9
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 3.9e-68 262.3 213 64.8
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 5.1e-68 261.9 230 62.2
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.5e-67 260.4 211 65.4
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.5e-67 259.6 219 62.6
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.5e-67 259.6 219 62.6
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 3.3e-67 259.2 221 64.7
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.3e-67 258.8 189 70.9
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 7.4e-67 258.1 212 65.1
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 9.7e-67 257.7 217 66.8
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 1.3e-66 257.3 230 60.9
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.7e-66 256.9 263 57.0
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 6.3e-66 255.0 211 66.4
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 8.2e-66 254.6 211 67.3
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 2.6e-64 249.6 224 59.8
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 4.2e-62 242.3 190 67.4
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 4.2e-62 242.3 251 55.4
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.2e-61 240.7 253 56.1
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 2.1e-61 240.0 208 59.6
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 2.7e-61 239.6 213 62.4
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 6.7e-60 235.0 218 59.6
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 8.8e-60 234.6 207 58.9
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 7.4e-59 231.5 218 59.6
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 2.2e-58 229.9 246 57.3
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 2.2e-58 229.9 207 60.4
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 6.3e-58 228.4 240 57.9
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 1.1e-57 227.6 173 69.4
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.4e-57 227.3 213 58.7
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 2.6e-56 223.0 220 57.7
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 5.5e-54 215.3 190 62.1
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 5.5e-54 215.3 167 67.7
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 2.2e-50 203.4 172 61.0
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 2.8e-50 203.0 151 71.5
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.4e-49 200.7 216 56.9
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.2e-48 197.6 156 66.0
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.1e-46 191.0 207 48.3
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 8.0e-45 184.9 200 45.5
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 1.7e-42 177.2 181 50.8
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.1e-41 174.5 210 41.9
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 3.2e-38 162.9 134 64.9
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 4.2e-38 162.5 212 47.6
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 5.2e-36 155.6 129 64.3
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 3.7e-34 149.4 206 47.1
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 1.7e-31 140.6 125 58.4
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 6.5e-31 138.7 98 72.4
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 2.5e-30 136.7 96 77.1
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 2.5e-30 136.7 108 64.8
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.5e-30 136.7 116 61.2
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 3.7e-26 122.9 87 66.7
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 2.4e-25 120.2 96 61.5
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 2.0e-16 90.5 206 27.2
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.5e-16 89.7 78 56.4
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 7.8e-16 88.6 206 27.2
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 8.6e-15 85.1 79 55.7
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.2e-13 81.3 59 71.2
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 3.6e-13 79.7 60 66.7
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 2.3e-12 77.0 66 62.1
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 4.4e-11 72.8 66 57.6
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 8.6e-07 58.5 92 43.5
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 1.9e-06 57.4 52 57.7
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 2.5e-06 57.0 46 63.0


User provided reference genes

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