Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 5.5e-156 554.3 288 100.0
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 6.3e-152 540.8 288 97.2
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 3.8e-149 531.6 288 95.8
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 2.0e-142 509.2 288 89.9
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.7e-141 506.1 288 90.3
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 7.3e-124 447.6 288 76.0
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 3.6e-123 445.3 249 90.8
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 2.3e-122 442.6 288 78.1
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 4.4e-121 438.3 288 76.7
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.3e-120 436.8 288 75.7
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 2.2e-120 436.0 288 75.3
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 2.2e-120 436.0 288 75.0
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 2.9e-120 435.6 288 76.4
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 2.9e-120 435.6 288 75.7
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 4.9e-120 434.9 288 75.7
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 4.9e-120 434.9 288 75.0
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 1.9e-119 433.0 288 74.3
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 1.9e-119 433.0 288 73.6
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 9.2e-119 430.6 287 74.2
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 1.2e-118 430.3 288 73.3
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.2e-118 430.3 288 74.0
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 2.7e-118 429.1 301 77.4
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 6.0e-118 427.9 288 74.7
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 1.0e-117 427.2 288 73.6
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.0e-117 427.2 288 74.0
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 5.1e-117 424.9 288 72.6
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 5.1e-117 424.9 288 74.7
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 1.1e-116 423.7 288 73.6
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 1.9e-116 422.9 288 71.2
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 4.3e-116 421.8 288 72.2
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 7.3e-116 421.0 288 75.3
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 7.3e-116 421.0 288 70.8
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 3.6e-115 418.7 288 72.9
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 4.7e-115 418.3 288 73.6
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 1.4e-114 416.8 288 73.3
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 6.8e-114 414.5 289 71.3
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 7.6e-113 411.0 288 70.8
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 7.6e-113 411.0 288 72.2
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 9.9e-113 410.6 288 71.9
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 9.9e-113 410.6 288 71.9
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.3e-112 410.2 288 71.5
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 3.8e-112 408.7 287 71.4
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 3.8e-112 408.7 288 70.5
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 4.9e-112 408.3 288 70.1
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.4e-111 406.8 288 69.1
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 1.4e-111 406.8 288 70.5
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 9.3e-111 404.1 279 71.3
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 9.3e-111 404.1 279 70.3
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 1.6e-110 403.3 278 71.2
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 2.7e-110 402.5 283 71.0
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 2.7e-110 402.5 282 72.0
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 7.8e-110 401.0 279 70.6
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.0e-109 400.6 288 70.5
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 1.7e-109 399.8 279 70.6
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 3.9e-109 398.7 282 69.9
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 6.6e-109 397.9 278 70.5
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 6.6e-109 397.9 288 71.2
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 8.7e-109 397.5 278 70.5
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 8.7e-109 397.5 278 70.5
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 8.7e-109 397.5 278 70.5
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 2.5e-108 396.0 279 69.5
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 2.5e-108 396.0 278 69.8
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 5.6e-108 394.8 288 68.8
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 1.3e-107 393.7 278 69.4
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 3.6e-107 392.1 426 52.6
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 6.2e-107 391.3 278 69.1
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 8.1e-107 391.0 252 73.4
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 1.8e-106 389.8 322 63.4
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 2.0e-105 386.3 288 68.1
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 2.0e-105 386.3 283 67.8
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 7.6e-105 384.4 288 67.0
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 1.7e-104 383.3 288 67.7
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 4.9e-104 381.7 282 67.7
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 4.9e-104 381.7 283 66.1
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 4.9e-104 381.7 282 67.7
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 5.4e-103 378.3 288 66.3
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 1.6e-102 376.7 283 65.7
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 3.5e-102 375.6 282 67.0
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.7e-101 373.2 264 69.7
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.0e-101 372.5 290 66.6
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 5.1e-101 371.7 282 66.3
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 8.7e-101 370.9 285 66.3
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 1.1e-100 370.5 249 73.5
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 1.3e-99 367.1 280 66.1
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 1.6e-99 366.7 279 66.3
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 1.8e-98 363.2 348 56.9
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 1.2e-97 360.5 280 62.9
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 3.2e-95 352.4 236 75.4
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 7.1e-95 351.3 280 62.5
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 4.6e-94 348.6 288 60.8
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 3.0e-93 345.9 273 64.5
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 1.9e-92 343.2 244 74.6
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 7.4e-92 341.3 288 60.1
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 2.1e-91 339.7 236 71.6
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 2.4e-90 336.3 279 63.8
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 3.1e-90 335.9 288 62.2
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 1.0e-88 330.9 322 55.3
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.3e-85 320.5 249 67.9
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 6.7e-85 318.2 221 71.5
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 4.5e-81 305.4 282 55.3
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 5.0e-80 302.0 284 53.9
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 3.0e-77 292.7 200 70.5
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 1.5e-76 290.4 284 52.8
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 1.1e-74 284.3 292 54.5
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.7e-59 233.8 145 80.0
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 9.4e-55 218.0 276 46.4
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 4.0e-53 212.6 164 62.2
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 5.0e-48 195.7 327 38.8
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.0e-46 188.3 181 51.9
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 5.5e-39 165.6 117 72.6
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.0e-37 161.4 181 51.4
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 4.9e-35 152.5 118 68.6
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 6.3e-35 152.1 131 55.7
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 5.9e-33 145.6 167 47.9
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 8.6e-32 141.7 263 35.0
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 1.5e-28 131.0 95 68.4
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.7e-28 129.0 189 42.9
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 2.3e-24 117.1 96 58.3
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 8.6e-24 115.2 167 41.3
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 9.2e-10 68.6 58 58.6
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 4.6e-09 66.2 142 35.9
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.0e-08 65.1 58 55.2
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 2.3e-08 63.9 50 64.0


User provided reference genes

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