Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g079940.1 Solanum lycopersicum HOM05D000800 ORTHO05D390226 7.9e-58 226.9 112 100.0
Sopen10g030560 Solanum pennellii HOM05D000800 ORTHO05D000658 3.8e-20 101.7 53 98.1
PGSC0003DMG400029825 Solanum tuberosum HOM05D000800 ORTHO05D000658 4.5e-13 78.2 53 77.4
PGSC0003DMG401029824 Solanum tuberosum HOM05D000800 ORTHO05D000658 4.5e-13 78.2 53 77.4
PGSC0003DMG402029824 Solanum tuberosum HOM05D000800 ORTHO05D000658 4.5e-13 78.2 53 77.4
Solyc10g079930.1 Solanum lycopersicum HOM05D000800 ORTHO05D000658 1.3e-12 76.6 53 75.5
Sopen10g030550 Solanum pennellii HOM05D000800 ORTHO05D000658 2.9e-12 75.5 53 73.6
Nitab4.5_0000562g0080 Nicotiana tabacum HOM05D000800 ORTHO05D000658 2.5e-11 72.4 66 60.6
Peaxi162Scf00069g00081 Petunia axillaris HOM05D000800 ORTHO05D000658 1.5e-08 63.2 62 64.5
Peaxi162Scf01023g00012 Petunia axillaris HOM05D000800 ORTHO05D000658 2.0e-08 62.8 61 65.6
PGSC0003DMG400008138 Solanum tuberosum HOM05D000800 ORTHO05D000658 3.7e-07 58.5 70 51.4
Oeu017939.1 Olea europaea HOM05D000800 ORTHO05D000658 6.3e-07 57.8 69 50.7
SalBow6G6507 Salvia bowleyana HOM05D000800 ORTHO05D000658 6.3e-07 57.8 65 49.2
DCAR_027834 Daucus carota HOM05D000800 ORTHO05D000658 8.3e-07 57.4 57 54.4
Peaxi162Scf00069g00091 Petunia axillaris HOM05D000800 ORTHO05D000658 8.3e-07 57.4 62 59.7
SalBow6G1397 Salvia bowleyana HOM05D000800 ORTHO05D000658 1.1e-06 57.0 65 47.7
CSS0020451 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 1.4e-06 56.6 71 49.3
Nitab4.5_0000636g0130 Nicotiana tabacum HOM05D000800 ORTHO05D000658 1.4e-06 56.6 70 51.4
Nitab4.5_0006870g0010 Nicotiana tabacum HOM05D000800 ORTHO05D000658 1.4e-06 56.6 70 51.4
Solyc10g079350.3 Solanum lycopersicum HOM05D000800 ORTHO05D000658 1.4e-06 56.6 70 50.0
Sopen10g029990 Solanum pennellii HOM05D000800 ORTHO05D000658 1.4e-06 56.6 70 50.0
PGSC0003DMG400008137 Solanum tuberosum HOM05D000800 ORTHO05D000658 1.4e-06 56.6 69 49.3
PGSC0003DMG400038438 Solanum tuberosum HOM05D000800 ORTHO05D000658 1.8e-06 56.2 59 54.2
Actinidia17231 Actinidia chinensis HOM05D000800 ORTHO05D000658 2.4e-06 55.8 70 51.4
PGSC0003DMG400035573 Solanum tuberosum HOM05D000800 ORTHO05D000658 2.4e-06 55.8 57 56.1
TWI53G0210 Tripterygium wilfordii HOM05D000800 ORTHO05D000658 2.4e-06 55.8 70 51.4
Nitab4.5_0000082g0170 Nicotiana tabacum HOM05D000800 ORTHO05D000658 3.1e-06 55.5 70 50.0
Hund19141 Selenicereus undatus HOM05D000800 ORTHO05D000658 3.1e-06 55.5 70 44.3
CSS0011526 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 4.1e-06 55.1 71 47.9
CSS0037130 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 4.1e-06 55.1 57 52.6
CSS0038690 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 4.1e-06 55.1 71 47.9
CSS0042538 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 4.1e-06 55.1 71 47.9
CSS0048325 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 4.1e-06 55.1 71 47.9
Oeu017936.1 Olea europaea HOM05D000800 ORTHO05D000658 4.1e-06 55.1 70 47.1
CSS0021469 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 5.4e-06 54.7 71 47.9
Nitab4.5_0000442g0150 Nicotiana tabacum HOM05D000800 ORTHO05D000658 5.4e-06 54.7 63 46.0
Nitab4.5_0002039g0060 Nicotiana tabacum HOM05D000800 ORTHO05D000658 5.4e-06 54.7 70 50.0
TWI74G1370 Tripterygium wilfordii HOM05D000800 ORTHO05D000658 5.4e-06 54.7 70 50.0
CSS0009586 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 7.0e-06 54.3 70 47.1
CSS0027523 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 7.0e-06 54.3 70 45.7
CSS0028317 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 7.0e-06 54.3 70 47.1
Cc06_g17790 Coffea canephora HOM05D000800 ORTHO05D000658 7.0e-06 54.3 70 51.4
Dinv12409 Davidia involucrata HOM05D000800 ORTHO05D000658 7.0e-06 54.3 100 42.0
Peaxi162Scf00002g00284 Petunia axillaris HOM05D000800 ORTHO05D000658 7.0e-06 54.3 70 45.7
PGSC0003DMG400028331 Solanum tuberosum HOM05D000800 ORTHO05D000658 7.0e-06 54.3 70 48.6
CSS0002539 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 9.1e-06 53.9 70 47.1
CSS0010900 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 9.1e-06 53.9 70 45.7
CSS0019374 Camellia sinensis var. sinensis HOM05D000800 ORTHO05D000658 9.1e-06 53.9 70 45.7
Cc06_g17780 Coffea canephora HOM05D000800 ORTHO05D000658 9.1e-06 53.9 70 51.4
DCAR_016982 Daucus carota HOM05D000800 ORTHO05D000658 9.1e-06 53.9 69 46.4
Hma1.2p1_0110F.1_g052750 Hydrangea macrophylla HOM05D000800 ORTHO05D000658 9.1e-06 53.9 70 44.3
Nitab4.5_0000755g0250 Nicotiana tabacum HOM05D000800 ORTHO05D000658 9.1e-06 53.9 111 36.9
Potri.016G057300 Populus trichocarpa HOM05D000800 ORTHO05D000658 9.1e-06 53.9 70 48.6
vmacro09063 Vaccinium macrocarpon HOM05D000800 ORTHO05D000658 9.1e-06 53.9 70 47.1


User provided reference genes

Program Settings