Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g079020.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.1e-61 240.0 134 100.0
Sopen10g029640 Solanum pennellii HOM05D000092 ORTHO05D000042 1.3e-43 179.9 134 70.9
PGSC0003DMG402007575 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.6e-33 146.4 114 68.4
PGSC0003DMG400008185 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.2e-31 140.2 139 64.0
PGSC0003DMG400019094 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.3e-30 136.7 90 75.6
PGSC0003DMG402011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.0e-28 127.9 96 69.8
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.0e-27 127.1 117 60.7
Solyc12g044200.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.7e-27 126.3 112 62.5
Sopen04g019300 Solanum pennellii HOM05D000092 ORTHO05D000042 2.1e-25 119.4 114 61.4
Solyc01g067160.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 8.9e-24 114.0 96 67.7
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 2.6e-23 112.5 96 66.7
PGSC0003DMG400030266 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.6e-23 112.5 99 63.6
PGSC0003DMG403000927 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.6e-23 112.5 90 67.8
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 5.8e-23 111.3 111 58.6
Sopen04g001580 Solanum pennellii HOM05D000092 ORTHO05D000042 9.8e-23 110.5 111 57.7
CAN.G360.7 Capsicum annuum HOM05D000092 ORTHO05D000042 1.3e-22 110.2 116 56.9
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.3e-22 110.2 116 56.9
PGSC0003DMG400010887 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.7e-22 109.8 87 69.0
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 2.2e-22 109.4 102 62.7
Solyc10g055120.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.2e-22 109.4 97 57.7
PGSC0003DMG400018901 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.9e-22 109.0 78 71.8
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 3.7e-22 108.6 100 63.0
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 3.7e-22 108.6 119 58.0
Sopen12g008010 Solanum pennellii HOM05D000092 ORTHO05D000042 4.9e-22 108.2 137 50.4
PGSC0003DMG400047092 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.9e-22 108.2 99 60.6
PGSC0003DMG400046580 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.4e-22 107.8 138 51.4
Solyc12g044170.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 8.3e-22 107.5 114 56.1
PGSC0003DMG400043863 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.1e-21 107.1 99 61.6
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 1.9e-21 106.3 117 56.4
PGSC0003DMG400018898 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.9e-21 106.3 101 57.4
PGSC0003DMG402008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.2e-21 105.5 104 58.7
Solyc07g044785.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 4.1e-21 105.1 99 63.6
CAN.G641.5 Capsicum annuum HOM05D000092 ORTHO05D000042 9.2e-21 104.0 102 60.8
CAN.G1161.11 Capsicum annuum HOM05D000092 ORTHO05D000042 1.2e-20 103.6 101 62.4
CAN.G960.28 Capsicum annuum HOM05D000092 ORTHO05D000042 1.2e-20 103.6 102 60.8
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.6e-20 103.2 102 59.8
CAN.G1161.41 Capsicum annuum HOM05D000092 ORTHO05D000042 2.7e-20 102.4 101 58.4
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 3.5e-20 102.1 99 60.6
PGSC0003DMG400011426 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.5e-20 102.1 86 65.1
PGSC0003DMG400018900 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.6e-20 101.7 78 71.8
Sopen04g025680 Solanum pennellii HOM05D000092 ORTHO05D000042 1.7e-19 99.8 103 62.1
Sopen10g029660 Solanum pennellii HOM05D000092 ORTHO05D000042 1.7e-19 99.8 55 87.3
PGSC0003DMG403008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.0e-19 99.0 63 73.0
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 5.1e-19 98.2 101 60.4
PGSC0003DMG400010953 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.1e-19 98.2 75 69.3
CAN.G960.38 Capsicum annuum HOM05D000092 ORTHO05D000042 6.6e-19 97.8 102 59.8
Sopen12g008040 Solanum pennellii HOM05D000092 ORTHO05D000042 6.6e-19 97.8 83 65.1
CAN.G1161.52 Capsicum annuum HOM05D000092 ORTHO05D000042 1.5e-18 96.7 102 58.8
CAN.G641.3 Capsicum annuum HOM05D000092 ORTHO05D000042 1.9e-18 96.3 79 65.8
Solyc04g057840.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.9e-18 96.3 92 64.1
Nitab4.5_0000358g0090 Nicotiana tabacum HOM05D000092 ORTHO05D000042 4.3e-18 95.1 110 56.4
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 4.3e-18 95.1 101 59.4
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.3e-18 95.1 107 59.8
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 7.3e-18 94.4 82 65.9
PGSC0003DMG403003025 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.2e-17 93.6 99 58.6
CAN.G1161.47 Capsicum annuum HOM05D000092 ORTHO05D000042 6.2e-17 91.3 102 53.9
CAN.G3331.2 Capsicum annuum HOM05D000092 ORTHO05D000042 6.2e-17 91.3 109 52.3
CAN.G959.29 Capsicum annuum HOM05D000092 ORTHO05D000042 6.2e-17 91.3 109 52.3
CAN.G641.6 Capsicum annuum HOM05D000092 ORTHO05D000042 8.1e-17 90.9 89 64.0
Peaxi162Scf00003g04738 Petunia axillaris HOM05D000092 ORTHO05D000042 1.5e-15 86.7 111 47.7
Peaxi162Scf00003g00479 Petunia axillaris HOM05D000092 ORTHO05D000042 2.0e-15 86.3 119 52.1
Solyc10g054960.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.0e-15 86.3 75 56.0
Peaxi162Scf00739g00123 Petunia axillaris HOM05D000092 ORTHO05D000042 2.6e-15 85.9 97 52.6
Solyc12g044190.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.6e-15 85.9 83 60.2
Sopen10g029280 Solanum pennellii HOM05D000092 ORTHO05D000042 2.9e-14 82.4 78 56.4
Peaxi162Scf00000g00843 Petunia axillaris HOM05D000092 ORTHO05D001673 6.4e-14 81.3 104 51.9
Peaxi162Scf00007g00431 Petunia axillaris HOM05D000092 ORTHO05D000042 6.4e-14 81.3 100 49.0
PGSC0003DMG402017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.4e-14 81.3 107 52.3
Solyc04g048910.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 8.4e-14 80.9 64 67.2
Sopen02g011670 Solanum pennellii HOM05D000092 ORTHO05D000042 1.1e-13 80.5 113 46.9
Peaxi162Scf00003g04724 Petunia axillaris HOM05D000092 ORTHO05D000042 1.9e-13 79.7 126 46.8
PGSC0003DMG400018902 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.4e-13 79.3 63 68.3
Solyc02g036280.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 4.1e-13 78.6 96 51.0
CAN.G641.7 Capsicum annuum HOM05D000092 ORTHO05D000042 9.2e-13 77.4 104 48.1
Peaxi162Scf00253g00314 Petunia axillaris HOM05D000092 ORTHO05D000042 3.0e-11 72.4 125 48.8
PGSC0003DMG400021477 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.5e-10 70.1 75 58.7
Sopen10g024970 Solanum pennellii HOM05D000092 ORTHO05D000042 3.3e-10 68.9 97 41.2
Dinv01598 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-09 67.0 114 38.6
CAN.G313.14 Capsicum annuum HOM05D000092 ORTHO05D000042 1.6e-09 66.6 67 58.2
Solyc12g016220.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.1e-09 66.2 51 68.6
PGSC0003DMG402016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.8e-08 63.2 102 42.2
Gorai.011G294200 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.4e-08 62.8 101 40.6
Solyc10g055060.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.1e-08 62.4 117 41.9
Gohir.D10G253700 Gossypium hirsutum HOM05D000092 ORTHO05D000042 6.8e-08 61.2 101 39.6
Gohir.A10G241600 Gossypium hirsutum HOM05D000092 ORTHO05D000042 8.9e-08 60.8 101 39.6
Gorai.011G294700 Gossypium raimondii HOM05D000092 ORTHO05D000042 8.9e-08 60.8 74 45.9
Sopen10g024930 Solanum pennellii HOM05D000092 ORTHO05D000042 8.9e-08 60.8 64 53.1
CsaV3_2G010470 Cucumis sativus L. HOM05D000092 ORTHO05D000042 2.6e-07 59.3 86 43.0
Dinv12838 Davidia involucrata HOM05D000092 ORTHO05D000042 4.4e-07 58.5 113 34.5
Peaxi162Scf00003g05030 Petunia axillaris HOM05D000092 ORTHO05D000042 5.8e-07 58.2 95 43.2
Peaxi162Scf34220g00001 Petunia axillaris HOM05D000092 ORTHO05D000042 5.8e-07 58.2 63 52.4
Gorai.011G294500 Gossypium raimondii HOM05D000092 ORTHO05D000042 7.6e-07 57.8 101 38.6
Dinv05441 Davidia involucrata HOM05D000092 ORTHO05D000042 9.9e-07 57.4 96 36.5
Gohir.A10G241400 Gossypium hirsutum HOM05D000092 ORTHO05D000042 9.9e-07 57.4 85 42.4
Potri.019G036875 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.9e-07 57.4 97 39.2
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 2.2e-06 56.2 121 33.1
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 2.2e-06 56.2 106 39.6
Gorai.011G294800 Gossypium raimondii HOM05D000092 ORTHO05D000042 3.8e-06 55.5 98 38.8
Gohir.A10G241832 Gossypium hirsutum HOM05D000092 ORTHO05D000042 4.9e-06 55.1 99 37.4
CSS0001888 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.4e-06 54.7 116 35.3
Gorai.011G263900 Gossypium raimondii HOM05D000092 ORTHO05D000042 6.4e-06 54.7 115 35.7
Manes.02G211901 Manihot esculenta HOM05D000092 ORTHO05D000042 6.4e-06 54.7 77 44.2
PGSC0003DMG400033853 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.4e-06 54.7 49 59.2


User provided reference genes

Program Settings