Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g078770.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 2.5e-30 135.2 89 100.0
Sopen10g029390 Solanum pennellii HOM05D003436 ORTHO05D003674 2.5e-30 135.2 89 100.0
PGSC0003DMG400011438 Solanum tuberosum HOM05D003436 ORTHO05D003674 4.8e-26 120.9 89 78.7
CAN.G1161.30 Capsicum annuum HOM05D003436 ORTHO05D003674 8.5e-23 110.2 72 87.5
Nitab4.5_0000105g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.9e-16 87.4 68 75.0
Nitab4.5_0001538g0010 Nicotiana tabacum HOM05D003436 ORTHO05D003674 7.7e-16 87.0 68 73.5
Nitab4.5_0000105g0080 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.9e-15 85.1 68 73.5
Nitab4.5_0000324g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 6.1e-13 77.4 59 72.9
Nitab4.5_0008334g0040 Nicotiana tabacum HOM05D003436 ORTHO05D003674 8.0e-13 77.0 65 66.2
SalBow1G8531 Salvia bowleyana HOM05D003436 ORTHO05D003674 1.4e-12 76.3 64 67.2
Peaxi162Scf00003g04337 Petunia axillaris HOM05D003436 ORTHO05D003674 5.2e-12 74.3 75 62.7
SalBow4G2804 Salvia bowleyana HOM05D003436 ORTHO05D003674 8.9e-12 73.6 72 61.1
Migut.J01829 Erythranthe guttata HOM05D003436 ORTHO05D003674 1.2e-11 73.2 69 59.4
THA.LOC104826769 Tarenaya hassleriana HOM05D003436 ORTHO05D003674 1.5e-11 72.8 73 60.3
Dinv14294 Davidia involucrata HOM05D003436 ORTHO05D003674 2.6e-11 72.0 71 54.9
Nitab4.5_0000105g0110 Nicotiana tabacum HOM05D003436 ORTHO05D003674 3.4e-11 71.6 75 60.0
Psat0s797g0160 Pisum sativum HOM05D003436 ORTHO05D003674 3.4e-11 71.6 63 63.5
Ca_25707_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 4.4e-11 71.2 68 57.4
Dinv14293 Davidia involucrata HOM05D003436 ORTHO05D003674 4.4e-11 71.2 79 51.9
Phvul.001G142000 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 4.4e-11 71.2 68 60.3
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 9.8e-11 70.1 70 54.3
BcaC06g32544 Brassica carinata HOM05D003436 ORTHO05D003674 9.8e-11 70.1 68 55.9
Solyc10g078780.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 1.3e-10 69.7 70 58.6
A10p29610 Brassica napus HOM05D003436 ORTHO05D003674 1.7e-10 69.3 68 55.9
C09p69990 Brassica napus HOM05D003436 ORTHO05D003674 1.7e-10 69.3 68 55.9
BolC9t59741H Brassica oleracea HOM05D003436 ORTHO05D003674 1.7e-10 69.3 68 55.9
BraA10t45003Z Brassica rapa HOM05D003436 ORTHO05D003674 1.7e-10 69.3 68 55.9
QL07p023622 Quercus lobata HOM05D003436 ORTHO05D003674 1.7e-10 69.3 82 54.9
Sopen10g029400 Solanum pennellii HOM05D003436 ORTHO05D003674 1.7e-10 69.3 69 59.4
CAN.G1161.31 Capsicum annuum HOM05D003436 ORTHO05D003674 2.2e-10 68.9 70 57.1
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 2.2e-10 68.9 60 65.0
Nitab4.5_0002343g0050 Nicotiana tabacum HOM05D003436 ORTHO05D003674 3.7e-10 68.2 75 58.7
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 3.7e-10 68.2 71 54.9
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 3.7e-10 68.2 71 53.5
BcaB01g06002 Brassica carinata HOM05D003436 ORTHO05D003674 4.9e-10 67.8 68 54.4
BcaC06g32392 Brassica carinata HOM05D003436 ORTHO05D003674 4.9e-10 67.8 68 54.4
Nitab4.5_0008334g0020 Nicotiana tabacum HOM05D003436 ORTHO05D003674 4.9e-10 67.8 71 54.9
Phvul.001G143100 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 4.9e-10 67.8 68 58.8
PGSC0003DMG400011439 Solanum tuberosum HOM05D003436 ORTHO05D003674 4.9e-10 67.8 70 57.1
GSVIVG01033503001 Vitis vinifera HOM05D003436 ORTHO05D003674 4.9e-10 67.8 82 51.2
CDE06G2670 Ceratophyllum demersum HOM05D003436 ORTHO05D003674 6.3e-10 67.4 66 53.0
DCAR_013554 Daucus carota HOM05D003436 ORTHO05D003674 6.3e-10 67.4 83 51.8
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 6.3e-10 67.4 70 55.7
Glyma.03G144400 Glycine max HOM05D003436 ORTHO05D003674 8.3e-10 67.0 68 55.9
Sp6g36090 Schrenkiella parvula HOM05D003436 ORTHO05D003674 8.3e-10 67.0 70 51.4
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 1.1e-09 66.6 80 51.2
Cpa.g.sc85.72 Carica papaya HOM05D003436 ORTHO05D003674 1.1e-09 66.6 74 55.4
Manes.08G044900 Manihot esculenta HOM05D003436 ORTHO05D003674 1.4e-09 66.2 68 55.9
Actinidia22034 Actinidia chinensis HOM05D003436 ORTHO05D003674 1.8e-09 65.9 70 51.4
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 1.8e-09 65.9 78 53.8
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 3.1e-09 65.1 70 51.4
ATR0605G384 Amborella trichopoda HOM05D003436 ORTHO05D003674 4.1e-09 64.7 66 53.0
AT5G06760 Arabidopsis thaliana HOM05D003436 ORTHO05D003674 4.1e-09 64.7 68 51.5
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 4.1e-09 64.7 90 45.6
AL6G16870 Arabidopsis lyrata HOM05D003436 ORTHO05D003674 5.4e-09 64.3 68 51.5
CARHR206420 Cardamine hirsuta HOM05D003436 ORTHO05D003674 7.0e-09 63.9 68 54.4
Sc19g0007020 Simmondsia chinensis HOM05D003436 ORTHO05D003674 7.0e-09 63.9 70 54.3
Eucgr.K01836 Eucalyptus grandis HOM05D003436 ORTHO05D003674 9.2e-09 63.5 71 50.7
MSTRG.19903 Avicennia marina HOM05D003436 ORTHO05D003674 1.2e-08 63.2 70 50.0
Psat0s797g0240 Pisum sativum HOM05D003436 ORTHO05D003674 1.2e-08 63.2 67 52.2
TPR.G27745 Trifolium pratense HOM05D003436 ORTHO05D003674 1.2e-08 63.2 66 56.1
CsaV3_3G038880 Cucumis sativus L. HOM05D003436 ORTHO05D003674 1.6e-08 62.8 78 47.4
MBI04_g14513_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 1.6e-08 62.8 68 52.9
RcHm_v2.0_Chr3g0479771 Rosa chinensis HOM05D003436 ORTHO05D003674 1.6e-08 62.8 74 52.7
Thecc.05G170800 Theobroma cacao HOM05D003436 ORTHO05D003674 1.6e-08 62.8 60 55.0
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 1.6e-08 62.8 67 52.2
FAN14G5712 Fragaria x ananassa HOM05D003436 ORTHO05D003674 2.0e-08 62.4 76 52.6
Medtr7g093140 Medicago truncatula HOM05D003436 ORTHO05D003674 2.0e-08 62.4 67 53.7
Oeu033740.1 Olea europaea HOM05D003436 ORTHO05D003674 2.0e-08 62.4 68 52.9
Lj1g0001300 Lotus japonicus HOM05D003436 ORTHO05D003674 2.7e-08 62.0 69 53.6
Lalb_Chr15g0078981 Lupinus albus HOM05D003436 ORTHO05D003674 2.7e-08 62.0 69 53.6
Medtr7g093160 Medicago truncatula HOM05D003436 ORTHO05D003674 2.7e-08 62.0 67 53.7
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.7e-08 62.0 70 54.3
Carub.0006s0565 Capsella rubella HOM05D003436 ORTHO05D003674 3.5e-08 61.6 68 51.5
ClCG10G017480 Citrullus lanatus HOM05D003436 ORTHO05D003674 3.5e-08 61.6 81 44.4
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 3.5e-08 61.6 66 53.0
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 3.5e-08 61.6 67 49.3
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 3.5e-08 61.6 68 51.5
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 3.5e-08 61.6 70 52.9
Psat6g120960 Pisum sativum HOM05D003436 ORTHO05D003674 3.5e-08 61.6 70 51.4
C03p03280 Brassica napus HOM05D003436 ORTHO05D003674 4.5e-08 61.2 70 50.0
MELO3C009631.2 Cucumis melo HOM05D003436 ORTHO05D003674 4.5e-08 61.2 78 47.4
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 4.5e-08 61.2 76 51.3
Nitab4.5_0000324g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 4.5e-08 61.2 72 52.8
Prupe.7G076400 Prunus persica HOM05D003436 ORTHO05D003674 4.5e-08 61.2 69 49.3
FvH4_6g22410 Fragaria vesca HOM05D003436 ORTHO05D003674 5.9e-08 60.8 76 51.3
unitig_899.g15079 Utricularia gibba HOM05D003436 ORTHO05D003674 5.9e-08 60.8 75 52.0
arahy.Tifrunner.gnm1.ann1.95S5ZX Arachis hypogaea HOM05D003436 ORTHO05D003674 7.8e-08 60.5 68 48.5
Thhalv10014897m.g Eutrema salsugineum HOM05D003436 ORTHO05D003674 7.8e-08 60.5 68 48.5
MBI04_g39831_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 7.8e-08 60.5 80 48.8
Nitab4.5_0000105g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 7.8e-08 60.5 70 52.9
VMungo1383G0066 Vigna mungo HOM05D003436 ORTHO05D003674 7.8e-08 60.5 61 59.0
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 7.8e-08 60.5 68 57.4
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 1.0e-07 60.1 92 43.5
Ca_08518_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 1.0e-07 60.1 66 53.0
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 1.0e-07 60.1 94 41.5
Rhsim03G0006400 Rhododendron simsii HOM05D003436 ORTHO05D003674 1.0e-07 60.1 65 50.8
Sabra16G0050300 Salix brachista HOM05D003436 ORTHO05D003674 1.0e-07 60.1 71 53.5
ECA236G0475 Erigeron canadensis HOM05D000402 ORTHO05D000263 1.3e-07 59.7 71 49.3
Medtr1g053970 Medicago truncatula HOM05D003436 ORTHO05D003674 1.3e-07 59.7 62 53.2
Medtr7g093170 Medicago truncatula HOM05D003436 ORTHO05D003674 1.3e-07 59.7 66 53.0
Oeu034263.1 Olea europaea HOM05D008970 ORTHO05D003674 1.3e-07 59.7 70 52.9
Atru.chr8.1096 Acer truncatum HOM05D003436 ORTHO05D003674 1.7e-07 59.3 65 50.8
arahy.Tifrunner.gnm1.ann1.00VVAL Arachis hypogaea HOM05D003436 ORTHO05D003674 1.7e-07 59.3 68 48.5
Lj5g0013312 Lotus japonicus HOM05D003436 ORTHO05D003674 1.7e-07 59.3 68 50.0
PGSC0003DMG400011437 Solanum tuberosum HOM05D003436 ORTHO05D003674 2.3e-07 58.9 70 50.0
Sed0015125 Sechium edule HOM05D003436 ORTHO05D003674 3.9e-07 58.2 83 44.6
C03p03320 Brassica napus HOM05D003436 ORTHO05D003674 5.0e-07 57.8 68 47.1
BolC3t12875H Brassica oleracea HOM05D003436 ORTHO05D003674 5.0e-07 57.8 68 47.1
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 5.0e-07 57.8 68 48.5
Psat3g068920 Pisum sativum HOM05D003436 ORTHO05D003674 6.6e-07 57.4 66 50.0
Sopen10g029380 Solanum pennellii HOM05D003436 ORTHO05D003674 6.6e-07 57.4 70 48.6
Cc06_g15980 Coffea canephora HOM05D003436 ORTHO05D003674 8.6e-07 57.0 67 50.7
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 8.6e-07 57.0 78 48.7
unitig_736.g22300 Utricularia gibba HOM05D000267 ORTHO05D000298 8.6e-07 57.0 76 53.9
arahy.Tifrunner.gnm1.ann1.BAUA8N Arachis hypogaea HOM05D003436 ORTHO05D003674 1.1e-06 56.6 51 60.8
Lsat_1_v5_gn_8_75321 Lactuca sativa HOM05D003436 ORTHO05D003674 1.1e-06 56.6 67 47.8
A03p02880 Brassica napus HOM05D003436 ORTHO05D003674 1.5e-06 56.2 69 49.3
BraA03t09652Z Brassica rapa HOM05D003436 ORTHO05D003674 1.5e-06 56.2 69 49.3
TWI77G0090 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 1.5e-06 56.2 61 49.2
GSVIVG01033505001 Vitis vinifera HOM05D003436 ORTHO05D003674 1.5e-06 56.2 65 50.8
ECA236G0537 Erigeron canadensis HOM05D003436 ORTHO05D003674 1.9e-06 55.8 63 50.8
Sed0019071 Sechium edule HOM05D003436 ORTHO05D003674 1.9e-06 55.8 71 45.1
Peaxi162Scf00003g04336 Petunia axillaris HOM05D003436 ORTHO05D003674 2.5e-06 55.5 79 53.2
Solyc10g078760.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 3.3e-06 55.1 70 47.1
EL10Ac3g06923 Beta vulgaris HOM05D003436 ORTHO05D003674 4.3e-06 54.7 65 49.2
CAN.G1161.29 Capsicum annuum HOM05D003436 ORTHO05D003674 4.3e-06 54.7 68 47.1
vmacro07911 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 4.3e-06 54.7 71 40.8
Aqoxy2G03681 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 5.6e-06 54.3 67 53.7
Aqoxy7G02037 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 5.6e-06 54.3 67 53.7
Cc06_g15970 Coffea canephora HOM05D003436 ORTHO05D003674 7.3e-06 53.9 54 59.3
Lalb_Chr04g0261031 Lupinus albus HOM05D003436 ORTHO05D003674 7.3e-06 53.9 70 42.9
Ah.08g210350 Amaranthus hybridus HOM05D003436 ORTHO05D003674 9.5e-06 53.5 66 45.5
Nn7g36015 Nelumbo nucifera HOM05D003436 ORTHO05D003674 9.5e-06 53.5 70 48.6


User provided reference genes

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