Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.5e-132 474.9 237 100.0
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 5.6e-130 467.6 236 98.7
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 1.9e-122 442.6 240 93.8
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 2.4e-104 382.5 238 83.6
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.6e-100 369.8 246 81.3
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 9.0e-96 354.0 236 79.2
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 2.4e-80 302.8 242 65.3
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 5.9e-79 298.1 244 64.8
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 2.9e-78 295.8 251 61.4
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 5.5e-77 291.6 240 62.5
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 1.6e-76 290.0 239 64.4
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 1.5e-74 283.5 252 62.3
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.5e-74 283.5 241 60.6
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 3.3e-74 282.3 247 63.2
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 1.7e-73 280.0 243 60.9
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 2.8e-73 279.3 242 59.5
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 6.3e-73 278.1 240 60.8
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 8.2e-73 277.7 249 60.6
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.1e-72 277.3 245 59.2
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 1.4e-72 276.9 247 61.1
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 5.3e-72 275.0 202 67.3
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 1.2e-71 273.9 247 60.3
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.2e-71 273.9 206 65.0
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 1.6e-71 273.5 241 61.8
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.6e-71 273.5 258 59.7
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 5.9e-71 271.6 237 59.9
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 2.9e-70 269.2 241 60.6
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 3.8e-70 268.9 270 57.0
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 8.5e-70 267.7 240 62.1
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 1.5e-69 266.9 241 58.5
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.5e-69 266.9 248 60.5
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 5.5e-69 265.0 237 61.2
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 1.2e-68 263.8 238 58.4
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 1.6e-68 263.5 237 57.8
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 3.6e-68 262.3 237 60.8
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 3.6e-68 262.3 238 60.9
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 6.1e-68 261.5 201 66.7
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 1.4e-67 260.4 237 57.4
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 2.3e-67 259.6 238 60.1
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 2.3e-67 259.6 240 60.0
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.0e-67 259.2 240 57.9
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 3.0e-67 259.2 239 56.9
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 6.8e-67 258.1 245 54.3
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 8.8e-67 257.7 208 63.5
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 2.0e-66 256.5 211 64.0
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 3.4e-66 255.8 240 58.3
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 3.4e-66 255.8 237 56.1
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 5.7e-66 255.0 239 57.7
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 1.3e-65 253.8 239 58.2
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 2.8e-65 252.7 196 62.8
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 3.7e-65 252.3 211 62.1
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 3.7e-65 252.3 238 57.1
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 3.7e-65 252.3 243 56.8
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 4.8e-65 251.9 240 57.5
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 6.3e-65 251.5 240 57.5
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 6.3e-65 251.5 240 57.5
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 1.4e-64 250.4 243 56.8
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 1.8e-64 250.0 248 52.8
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 3.1e-64 249.2 212 60.8
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 4.1e-64 248.8 245 56.3
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 5.3e-64 248.4 247 56.3
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 5.3e-64 248.4 247 56.3
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 5.3e-64 248.4 208 62.0
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 1.6e-63 246.9 246 57.3
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 3.5e-63 245.7 245 54.7
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 4.5e-63 245.4 207 61.8
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 4.5e-63 245.4 247 56.3
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 7.7e-63 244.6 242 55.4
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 7.7e-63 244.6 207 61.8
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 2.9e-62 242.7 199 62.8
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 3.8e-62 242.3 244 51.6
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 6.5e-62 241.5 203 62.1
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 8.5e-62 241.1 193 62.2
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 2.5e-61 239.6 203 61.6
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 1.6e-60 236.9 237 56.5
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 3.6e-60 235.7 204 60.3
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 2.3e-59 233.0 233 54.9
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 5.2e-59 231.9 193 59.1
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 1.5e-58 230.3 240 54.2
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 2.2e-57 226.5 244 52.9
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 1.8e-56 223.4 205 57.6
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 5.4e-56 221.9 227 51.1
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 1.2e-55 220.7 236 51.3
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 1.6e-55 220.3 239 51.0
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 2.9e-54 216.1 155 69.0
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 4.2e-53 212.2 213 54.9
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 7.2e-53 211.5 195 56.4
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.0e-51 207.6 130 72.3
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.2e-50 204.1 315 44.4
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 1.7e-49 200.3 255 46.7
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 1.1e-48 197.6 171 58.5
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.8e-44 183.0 108 75.9
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 8.0e-44 181.4 110 72.7
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 1.4e-43 180.6 110 74.5
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 1.3e-41 174.1 134 57.5
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 1.7e-41 173.7 108 70.4
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 2.2e-41 173.3 109 71.6
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 1.1e-40 171.0 170 57.6
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 8.9e-35 151.4 184 44.0
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 5.8e-34 148.7 87 77.0
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 8.3e-33 144.8 96 74.0
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 4.6e-31 139.0 127 56.7
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 2.1e-23 113.6 136 52.9
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 3.0e-22 109.8 77 70.1
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 1.5e-21 107.5 65 76.9
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 1.5e-21 107.5 65 76.9
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 3.3e-21 106.3 71 70.4
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 4.3e-21 105.9 177 36.7
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 5.6e-21 105.5 76 68.4
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 7.3e-21 105.1 122 43.4
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.4e-19 100.9 151 43.7
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 2.6e-18 96.7 68 69.1
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 1.3e-14 84.3 173 32.4
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.8e-12 76.6 58 69.0
Oeu013881.1 Olea europaea HOM05D006876 ORTHO05D008708 4.0e-11 72.8 94 51.1
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 1.3e-09 67.8 44 63.6
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 1.9e-08 63.9 53 66.0
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 2.4e-08 63.5 140 34.3
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 4.2e-08 62.8 53 64.2


User provided reference genes

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