Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.8e-28 128.6 68 100.0
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 4.5e-16 87.4 47 95.7
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 4.5e-16 87.4 47 95.7
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.2e-15 85.1 52 84.6
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 3.2e-14 81.3 47 89.4
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 1.6e-13 79.0 47 85.1
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 6.1e-13 77.0 47 80.9
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 1.0e-12 76.3 47 78.7
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 3.0e-12 74.7 46 80.4
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 3.0e-12 74.7 46 80.4
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 3.0e-12 74.7 46 80.4
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.0e-12 74.7 52 75.0
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 3.0e-12 74.7 47 83.0
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 4.0e-12 74.3 47 83.0
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 5.2e-12 73.9 46 76.1
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 5.2e-12 73.9 47 80.9
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 5.2e-12 73.9 47 83.0
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 5.2e-12 73.9 47 78.7
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 78.7
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 80.9
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 80.9
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 80.9
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 80.9
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 80.9
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 80.9
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 6.8e-12 73.6 47 80.9
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 8.8e-12 73.2 47 76.6
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 1.2e-11 72.8 47 78.7
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 1.5e-11 72.4 47 76.6
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 1.5e-11 72.4 47 78.7
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.5e-11 72.4 46 76.1
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.5e-11 72.4 46 76.1
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.5e-11 72.4 47 80.9
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 1.5e-11 72.4 46 82.6
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.0e-11 72.0 46 76.1
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.0e-11 72.0 46 76.1
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 2.0e-11 72.0 46 76.1
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 2.0e-11 72.0 47 74.5
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 2.0e-11 72.0 47 74.5
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 2.6e-11 71.6 47 74.5
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 3.4e-11 71.2 47 76.6
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 3.4e-11 71.2 47 78.7
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.4e-11 71.2 47 76.6
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 3.4e-11 71.2 46 80.4
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 3.4e-11 71.2 47 76.6
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 4.4e-11 70.9 46 78.3
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 4.4e-11 70.9 46 78.3
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 4.4e-11 70.9 46 73.9
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 4.4e-11 70.9 47 76.6
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 4.4e-11 70.9 50 70.0
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 4.4e-11 70.9 46 78.3
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 4.4e-11 70.9 64 60.9
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 5.7e-11 70.5 46 78.3
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 5.7e-11 70.5 47 72.3
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 5.7e-11 70.5 46 78.3
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 5.7e-11 70.5 47 76.6
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 7.5e-11 70.1 46 78.3
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 9.8e-11 69.7 62 64.5
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 9.8e-11 69.7 46 78.3
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 9.8e-11 69.7 46 78.3
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 9.8e-11 69.7 47 78.7
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 1.3e-10 69.3 47 72.3
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 1.3e-10 69.3 47 78.7
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 1.3e-10 69.3 47 74.5
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.7e-10 68.9 47 74.5
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 1.7e-10 68.9 47 76.6
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 2.2e-10 68.6 47 72.3
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 2.2e-10 68.6 47 76.6
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 2.2e-10 68.6 47 72.3
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 2.2e-10 68.6 49 73.5
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 2.2e-10 68.6 47 76.6
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 2.8e-10 68.2 47 72.3
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 3.7e-10 67.8 47 74.5
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 4.8e-10 67.4 45 80.0
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 4.8e-10 67.4 46 76.1
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 4.8e-10 67.4 47 72.3
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 4.8e-10 67.4 46 73.9
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 6.3e-10 67.0 47 76.6
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 6.3e-10 67.0 46 76.1
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 6.3e-10 67.0 46 76.1
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 1.1e-09 66.2 46 73.9
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 1.4e-09 65.9 46 76.1
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 1.4e-09 65.9 47 70.2
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 1.4e-09 65.9 47 70.2
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.8e-09 65.5 46 73.9
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 2.4e-09 65.1 47 74.5
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 3.1e-09 64.7 47 72.3
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 5.4e-09 63.9 40 72.5
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 7.0e-09 63.5 47 66.0
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 7.0e-09 63.5 48 66.7
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 7.0e-09 63.5 47 68.1
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 1.2e-08 62.8 46 67.4
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 3.5e-08 61.2 47 68.1
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 7.7e-08 60.1 47 66.0
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 1.3e-07 59.3 47 66.0
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 2.3e-07 58.5 47 59.6
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 5.0e-07 57.4 40 72.5
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 1.1e-06 56.2 66 50.0


User provided reference genes

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