Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g074465.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 3.0e-54 214.9 110 100.0
Solyc10g074447.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 2.8e-39 165.2 85 92.9
Sopen10g026930 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-24 116.3 52 98.1
Sopen10g026960 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-19 98.6 44 95.5
Solyc10g074443.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 2.8e-15 85.5 76 52.6
Sopen10g013920 Solanum pennellii HOM05D010058 ORTHO05D010053 1.1e-11 73.6 76 46.1
DCAR_019488 Daucus carota HOM05D013903 ORTHO05D010053 9.3e-11 70.5 76 47.4
CAN.G960.14 Capsicum annuum HOM05D010058 ORTHO05D010053 1.2e-10 70.1 65 47.7
Sopen10g029560 Solanum pennellii HOM05D010058 ORTHO05D010053 1.6e-10 69.7 76 43.4
CAN.G1320.8 Capsicum annuum HOM05D010058 ORTHO05D010053 2.1e-10 69.3 57 45.6
Thecc.04G269000 Theobroma cacao HOM05D010058 ORTHO05D010053 2.7e-10 68.9 80 46.2
DCAR_019487 Daucus carota HOM05D013903 ORTHO05D010053 4.6e-10 68.2 76 46.1
Migut.K00030 Erythranthe guttata HOM05D013903 ORTHO05D010053 3.9e-09 65.1 64 42.2
Gohir.D01G011300 Gossypium hirsutum HOM05D010058 ORTHO05D010053 7.3e-08 60.8 67 43.3
Gorai.002G013200 Gossypium raimondii HOM05D010058 ORTHO05D010053 7.3e-08 60.8 67 43.3
Sc25g0005050 Simmondsia chinensis HOM05D013903 ORTHO05D010053 7.3e-08 60.8 73 35.6
Gorai.002G013100 Gossypium raimondii HOM05D010058 ORTHO05D010053 1.3e-07 60.1 67 43.3
COL.COLO4_16004 Corchorus olitorius HOM05D010058 ORTHO05D010053 2.1e-07 59.3 74 43.2
GSVIVG01001774001 Vitis vinifera HOM05D013903 ORTHO05D010053 2.8e-07 58.9 74 44.6
GSVIVG01004335001 Vitis vinifera HOM05D013903 ORTHO05D010053 2.8e-07 58.9 74 44.6
AL6G42890 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.8e-07 58.2 73 38.4
Gohir.A01G013201 Gossypium hirsutum HOM05D010058 ORTHO05D010053 4.8e-07 58.2 67 41.8
Gohir.D01G011200 Gossypium hirsutum HOM05D010058 ORTHO05D010053 4.8e-07 58.2 67 38.8
COL.COLO4_16002 Corchorus olitorius HOM05D010058 ORTHO05D010053 8.1e-07 57.4 80 38.8
Gohir.A01G012250 Gossypium hirsutum HOM05D010058 ORTHO05D010053 8.1e-07 57.4 67 40.3
Gohir.D01G011100 Gossypium hirsutum HOM05D010058 ORTHO05D010053 1.4e-06 56.6 67 38.8
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.0e-06 55.1 82 34.1
AL6G42900 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 5.3e-06 54.7 76 36.8
Gohir.D01G011000 Gossypium hirsutum HOM05D010058 ORTHO05D010053 5.3e-06 54.7 67 37.3
ClCG09G010130 Citrullus lanatus HOM05D013903 ORTHO05D010053 9.0e-06 53.9 50 42.0


User provided reference genes

Program Settings