Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g062000.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.6e-24 115.2 54 100.0
Lalb_Chr06g0172221 Lupinus albus HOM05D003666 ORTHO05D004770 2.1e-16 88.2 53 81.1
Lalb_Chr00c24g0407361 Lupinus albus HOM05D003666 ORTHO05D004770 2.8e-16 87.8 53 81.1
Lalb_Chr01g0010981 Lupinus albus HOM05D003666 ORTHO05D004770 2.8e-16 87.8 53 81.1
Hma1.2p1_0257F.1_g103600 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 3.6e-16 87.4 52 80.8
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 8.0e-16 86.3 53 79.2
Nn1g09940 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.0e-16 86.3 53 79.2
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 8.0e-16 86.3 53 79.2
Sopen11g018270 Solanum pennellii HOM05D003666 ORTHO05D004770 8.0e-16 86.3 53 79.2
Peaxi162Scf01767g00002 Petunia axillaris HOM05D003666 ORTHO05D004770 1.0e-15 85.9 52 78.8
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.4e-15 85.5 53 79.2
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.4e-15 85.5 53 79.2
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 1.4e-15 85.5 53 79.2
AL3G44310 Arabidopsis lyrata HOM05D003666 ORTHO05D004770 2.3e-15 84.7 53 79.2
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 2.3e-15 84.7 53 79.2
Medtr0082s0060 Medicago truncatula HOM05D003666 ORTHO05D004770 3.0e-15 84.3 52 78.8
RcHm_v2.0_MTg0498651 Rosa chinensis HOM05D003666 ORTHO05D004770 3.0e-15 84.3 51 78.4
Peaxi162Scf00530g00005 Petunia axillaris HOM05D003666 ORTHO05D004770 4.0e-15 84.0 51 78.4
CAN.G65.28 Capsicum annuum HOM05D003666 ORTHO05D004770 5.2e-15 83.6 53 77.4
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 5.2e-15 83.6 51 78.4
Lalb_Chr06g0172341 Lupinus albus HOM05D003666 ORTHO05D004770 5.2e-15 83.6 47 85.1
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 6.8e-15 83.2 51 78.4
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 6.8e-15 83.2 50 80.0
Solyc00g500187.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 6.8e-15 83.2 50 80.0
Solyc00g500251.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 6.8e-15 83.2 50 80.0
arahy.Tifrunner.gnm1.ann1.DQZY30 Arachis hypogaea HOM05D003666 ORTHO05D004770 8.9e-15 82.8 51 78.4
arahy.Tifrunner.gnm1.ann1.G61VPX Arachis hypogaea HOM05D003666 ORTHO05D004770 8.9e-15 82.8 51 78.4
CAN.G1.7 Capsicum annuum HOM05D003666 ORTHO05D004770 8.9e-15 82.8 53 75.5
Aa31csc553G50 Aethionema arabicum HOM05D003666 ORTHO05D004770 1.2e-14 82.4 51 78.4
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 1.2e-14 82.4 51 78.4
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 1.2e-14 82.4 51 78.4
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 1.2e-14 82.4 51 76.5
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 1.5e-14 82.0 51 78.4
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 2.0e-14 81.6 51 78.4
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 5.7e-14 80.1 50 76.0
CAN.G85.17 Capsicum annuum HOM05D003666 ORTHO05D004770 7.5e-14 79.7 53 73.6
Psat4g185400 Pisum sativum HOM05D003666 ORTHO05D004770 7.5e-14 79.7 52 73.1
SHI21047 Sapria himalayana HOM05D003666 ORTHO05D004770 9.8e-14 79.3 52 76.9
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 2.2e-13 78.2 45 84.4
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 2.2e-13 78.2 45 84.4
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 2.8e-13 77.8 49 79.6
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 2.8e-13 77.8 49 79.6
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 4.9e-13 77.0 50 72.0
CAN.G1001.36 Capsicum annuum HOM05D003666 ORTHO05D004770 8.3e-13 76.3 53 71.7
Nitab4.5_0006085g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-12 75.9 50 74.0
SEGI_24024 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.1e-12 75.9 51 66.7
SEGI_34311 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.1e-12 75.9 51 66.7
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 1.4e-12 75.5 49 77.6
Nitab4.5_0000172g0090 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.4e-12 75.5 50 74.0
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 7.0e-12 73.2 45 80.0
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 2.0e-11 71.6 51 68.6
SHI36045 Sapria himalayana HOM05D003666 ORTHO05D004770 6.6e-10 66.6 40 80.0


User provided reference genes

Program Settings