Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g054960.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.4e-43 177.9 92 100.0
Solyc10g055120.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 5.0e-34 147.5 91 85.7
Sopen10g024970 Solanum pennellii HOM05D000092 ORTHO05D000042 2.2e-29 132.1 81 88.9
Sopen10g024930 Solanum pennellii HOM05D000092 ORTHO05D000042 4.1e-28 127.9 82 86.6
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.5e-27 124.8 81 77.8
Solyc10g055060.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.0e-23 113.2 81 79.0
PGSC0003DMG400047092 Solanum tuberosum HOM05D000092 ORTHO05D000042 9.8e-22 106.7 87 66.7
PGSC0003DMG402007575 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.1e-20 103.2 81 67.9
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.6e-19 99.4 89 60.7
PGSC0003DMG400030266 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.5e-19 97.8 74 66.2
Sopen04g001580 Solanum pennellii HOM05D000092 ORTHO05D000042 7.2e-17 90.5 78 60.3
Sopen10g024980 Solanum pennellii HOM05D000092 ORTHO05D000042 1.8e-15 85.9 64 76.6
Solyc12g044200.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 4.0e-15 84.7 75 60.0
Sopen04g019300 Solanum pennellii HOM05D000092 ORTHO05D000042 4.0e-15 84.7 85 60.0
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 5.2e-15 84.3 66 68.2
CAN.G360.7 Capsicum annuum HOM05D000092 ORTHO05D000042 1.5e-14 82.8 77 59.7
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 1.5e-14 82.8 77 59.7
CAN.G641.5 Capsicum annuum HOM05D000092 ORTHO05D000042 2.6e-14 82.0 65 67.7
Solyc10g079020.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 5.7e-14 80.9 75 56.0
PGSC0003DMG400018898 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.7e-13 79.3 91 50.5
CAN.G1161.41 Capsicum annuum HOM05D000092 ORTHO05D000042 2.2e-13 79.0 62 64.5
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 3.7e-13 78.2 66 62.1
Solyc01g067160.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.7e-13 78.2 65 61.5
Solyc12g044170.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.1e-12 76.6 68 64.7
Sopen10g029640 Solanum pennellii HOM05D000092 ORTHO05D000042 1.4e-12 76.3 89 51.7
CAN.G641.3 Capsicum annuum HOM05D000092 ORTHO05D000042 1.8e-12 75.9 67 62.7
PGSC0003DMG402011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.4e-12 75.5 60 63.3
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 3.1e-12 75.1 65 60.0
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 5.4e-12 74.3 59 62.7
CAN.G960.28 Capsicum annuum HOM05D000092 ORTHO05D000042 5.4e-12 74.3 66 60.6
CAN.G1161.52 Capsicum annuum HOM05D000092 ORTHO05D000042 7.0e-12 73.9 60 65.0
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 7.0e-12 73.9 73 57.5
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 9.2e-12 73.6 60 68.3
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 1.2e-11 73.2 67 62.7
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.6e-11 72.8 67 62.7
PGSC0003DMG400008185 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.6e-11 72.8 75 57.3
CAN.G1161.11 Capsicum annuum HOM05D000092 ORTHO05D000042 7.8e-11 70.5 59 64.4
CAN.G960.38 Capsicum annuum HOM05D000092 ORTHO05D000042 2.9e-10 68.6 61 65.6
Sopen12g008010 Solanum pennellii HOM05D000092 ORTHO05D000042 5.0e-10 67.8 90 46.7
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 8.6e-10 67.0 78 51.3
PGSC0003DMG400044595 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.1e-09 66.6 58 60.3
Solyc04g057840.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.5e-09 66.2 76 52.6
Solyc07g044785.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.5e-09 66.2 82 51.2
Sopen12g008040 Solanum pennellii HOM05D000092 ORTHO05D000042 1.9e-09 65.9 79 53.2
PGSC0003DMG403000927 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.3e-09 65.1 51 60.8
PGSC0003DMG400033853 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.6e-09 64.3 61 57.4
Sopen10g029280 Solanum pennellii HOM05D000092 ORTHO05D000042 7.3e-09 63.9 53 60.4
CAN.G1161.47 Capsicum annuum HOM05D000092 ORTHO05D000042 9.5e-09 63.5 60 56.7
PGSC0003DMG400019094 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.7e-08 61.2 56 55.4
CAN.G3331.2 Capsicum annuum HOM05D000092 ORTHO05D000042 3.0e-07 58.5 66 50.0
CAN.G959.29 Capsicum annuum HOM05D000092 ORTHO05D000042 3.0e-07 58.5 66 50.0
PGSC0003DMG400043863 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.2e-07 57.8 60 53.3
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.2e-07 57.8 60 58.3
PGSC0003DMG400046580 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.5e-06 56.2 46 56.5
Sopen00g006780 Solanum pennellii HOM05D000092 ORTHO05D000042 4.4e-06 54.7 35 91.4
PGSC0003DMG400011426 Solanum tuberosum HOM05D000092 ORTHO05D000042 4.4e-06 54.7 46 58.7


User provided reference genes

Program Settings