Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g054410.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 2.1e-79 299.3 189 100.0
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 2.5e-40 169.5 99 88.9
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.8e-36 155.6 96 84.4
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 3.2e-35 152.5 96 84.4
Sopen07g013090 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-28 128.6 83 83.1
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 9.3e-27 124.4 96 67.7
CAN.G26.44 Capsicum annuum HOM05D003329 ORTHO05D006664 1.3e-25 120.6 94 68.1
Solyc12g062227.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 3.9e-25 119.0 156 66.0
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.1e-24 117.5 105 61.9
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 3.7e-23 112.5 87 65.5
CAN.G255.13 Capsicum annuum HOM05D003329 ORTHO05D006664 1.7e-20 103.6 83 66.3
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.8e-20 102.4 106 57.5
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.9e-19 100.1 100 52.0
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.9e-19 100.1 100 52.0
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 2.5e-19 99.8 99 57.6
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.5e-19 99.8 100 52.0
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 7.1e-19 98.2 100 51.0
CAN.G675.4 Capsicum annuum HOM05D000040 ORTHO05D009963 2.7e-18 96.3 72 69.4
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-17 93.6 105 51.4
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.1e-17 92.0 106 50.0
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.1e-17 92.0 98 53.1
Sopen07g022750 Solanum pennellii HOM05D003329 ORTHO05D006664 3.3e-16 89.4 50 88.0
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.6e-16 87.8 98 50.0
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-15 87.0 97 52.6
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-15 87.0 98 52.0
PGSC0003DMG400044748 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.1e-15 86.7 94 52.1
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.2e-15 84.7 98 49.0
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-14 84.0 94 51.1
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.1e-14 82.8 98 51.0
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.0e-14 82.4 88 50.0
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.9e-14 81.6 97 48.5
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.0e-14 81.3 98 46.9
Sopen07g021890 Solanum pennellii HOM05D000004 ORTHO05D006664 9.0e-14 81.3 44 88.6
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-13 80.5 96 47.9
CAN.G3481.2 Capsicum annuum HOM05D003329 ORTHO05D006664 2.0e-13 80.1 87 55.2
CAN.G1572.5 Capsicum annuum HOM05D003329 ORTHO05D006664 3.4e-13 79.3 93 52.7
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.8e-13 78.6 98 50.0
Nitab4.5_0001401g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.0e-12 77.8 93 49.5
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-12 77.4 110 45.5
Peaxi162Scf00765g00129 Petunia axillaris HOM05D003329 ORTHO05D006664 1.3e-12 77.4 100 48.0
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.2e-12 76.6 108 44.4
PGSC0003DMG401006646 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.2e-12 76.6 47 76.6
Sopen10g024270 Solanum pennellii HOM05D003329 ORTHO05D006664 1.1e-11 74.3 42 83.3
Solyc04g050445.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.9e-11 73.6 78 56.4
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 2.5e-11 73.2 96 45.8
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.5e-10 69.3 102 44.1
Nitab4.5_0003484g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.5e-10 69.3 85 51.8
Peaxi162Scf00237g01212 Petunia axillaris HOM05D003329 ORTHO05D006664 6.1e-10 68.6 96 43.8
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-09 67.0 115 39.1
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-09 67.0 106 40.6
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-09 66.6 70 47.1
Peaxi162Scf01176g00135 Petunia axillaris HOM05D003329 ORTHO05D006664 3.0e-09 66.2 96 41.7
Peaxi162Scf00884g00022 Petunia axillaris HOM05D003329 ORTHO05D006664 1.1e-08 64.3 101 38.6
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 3.3e-08 62.8 87 47.1
Peaxi162Scf01414g00018 Petunia axillaris HOM05D003329 ORTHO05D006664 3.3e-08 62.8 107 42.1
Peaxi162Scf00225g00104 Petunia axillaris HOM05D003329 ORTHO05D006664 7.4e-08 61.6 107 42.1
Peaxi162Scf00990g00006 Petunia axillaris HOM05D003329 ORTHO05D006664 7.4e-08 61.6 107 42.1
Sopen08g005900 Solanum pennellii HOM05D003150 ORTHO05D003532 7.4e-08 61.6 41 75.6
PGSC0003DMG400045983 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.2e-07 60.1 44 65.9
Nitab4.5_0005116g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.8e-07 59.7 78 48.7
Peaxi162Scf00171g00215 Petunia axillaris HOM05D003329 ORTHO05D006664 2.8e-07 59.7 102 38.2
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-07 59.3 96 41.7
Peaxi162Scf00021g00075 Petunia axillaris HOM05D003329 ORTHO05D006664 3.7e-07 59.3 107 41.1
Nitab4.5_0000248g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.8e-07 58.9 93 41.9
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 8.2e-07 58.2 101 36.6
Nitab4.5_0003774g0080 Nicotiana tabacum HOM05D003329 ORTHO05D001349 1.1e-06 57.8 63 47.6
Solyc02g031730.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.1e-06 57.8 68 39.7
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 1.8e-06 57.0 66 43.9
Peaxi162Scf00145g00105 Petunia axillaris HOM05D003329 ORTHO05D006664 1.8e-06 57.0 66 43.9
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 1.8e-06 57.0 66 43.9
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-06 57.0 68 39.7
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-06 57.0 68 39.7
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-06 57.0 68 39.7
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-06 57.0 68 39.7
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-06 56.6 45 60.0
Nitab4.5_0012182g0020 Nicotiana tabacum HOM05D003329 ORTHO05D011659 2.4e-06 56.6 64 50.0
Peaxi162Scf00098g00068 Petunia axillaris HOM05D003329 ORTHO05D015718 2.4e-06 56.6 61 45.9
Solyc01g111480.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.4e-06 56.6 68 39.7
Solyc02g062435.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.4e-06 56.6 68 39.7
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.4e-06 56.6 68 39.7
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 2.4e-06 56.6 68 39.7
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.4e-06 56.6 68 39.7
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 2.4e-06 56.6 68 39.7
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 2.4e-06 56.6 68 39.7
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-06 56.6 68 39.7
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-06 56.6 68 39.7
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-06 56.6 68 39.7
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-06 56.6 68 39.7
Nitab4.5_0000270g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.1e-06 56.2 83 45.8
Nitab4.5_0002026g0180 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.1e-06 56.2 74 45.9
Peaxi162Scf00365g00058 Petunia axillaris HOM05D000017 ORTHO05D001349 4.1e-06 55.8 69 43.5
Nitab4.5_0003152g0050 Nicotiana tabacum HOM05D003329 ORTHO05D011659 5.3e-06 55.5 91 42.9
Peaxi162Scf00031g00088 Petunia axillaris HOM05D003329 ORTHO05D001349 6.9e-06 55.1 63 50.8
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 6.9e-06 55.1 92 35.9
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 6.9e-06 55.1 69 39.1
Nitab4.5_0000427g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.0e-06 54.7 81 33.3
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.0e-06 54.7 96 39.6
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.0e-06 54.7 41 61.0


User provided reference genes

Program Settings