Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.8e-42 173.3 85 100.0
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-24 116.3 76 73.7
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-24 115.9 75 76.0
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-24 114.8 76 73.7
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.2e-23 110.5 76 68.4
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.9e-20 101.7 76 65.8
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 3.8e-20 101.3 76 61.8
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-20 100.9 69 69.6
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 3.2e-19 98.2 76 64.5
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-18 96.3 76 60.5
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.5e-18 94.7 79 60.8
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 7.9e-18 93.6 77 59.7
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.0e-17 93.2 80 56.2
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.8e-17 92.4 64 68.8
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-17 92.0 76 53.9
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-17 90.9 70 60.0
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-16 88.2 73 54.8
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-16 87.8 52 78.8
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-16 87.8 52 78.8
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.7e-16 86.7 79 57.0
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.7e-16 86.7 52 78.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-15 85.1 52 76.9
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.8e-15 84.3 46 87.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-15 84.3 79 53.2
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.3e-15 84.0 76 52.6
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 6.3e-15 84.0 76 52.6
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 3.1e-14 81.6 55 69.1
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-14 81.3 61 62.3
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 9.0e-14 80.1 76 50.0
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 9.0e-14 80.1 51 74.5
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-13 79.0 65 56.9
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 3.4e-13 78.2 52 71.2
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-13 78.2 50 74.0
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.5e-13 77.8 57 61.4
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.9e-13 77.4 72 52.8
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.8e-12 74.7 55 63.6
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 5.0e-12 74.3 50 72.0
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.0e-12 74.3 56 62.5
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-11 73.2 49 67.3
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-11 72.4 62 54.8
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 4.2e-11 71.2 76 47.4
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.5e-11 70.9 78 44.9
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-11 70.5 47 74.5
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-10 68.9 39 79.5
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 4.6e-10 67.8 52 63.5
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.1e-10 67.4 52 59.6
Solyc10g052810.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.9e-10 67.0 47 72.3
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-09 66.6 55 54.5
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.0e-09 66.6 91 39.6
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-09 65.9 46 69.6
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-09 65.5 46 69.6
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 8.8e-09 63.5 51 58.8
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-08 63.2 46 67.4
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.5e-08 62.0 76 43.4
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-08 62.0 46 63.0
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 4.3e-08 61.2 52 55.8
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.7e-08 60.8 50 52.0
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 5.7e-08 60.8 41 70.7
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.7e-08 60.8 34 79.4
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 9.7e-08 60.1 53 56.6
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 1.3e-07 59.7 71 45.1
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-07 58.9 50 48.0
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.8e-07 58.5 45 60.0
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-07 58.5 50 48.0
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 6.3e-07 57.4 46 60.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.3e-07 57.4 50 46.0
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-07 57.0 51 47.1
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-07 57.0 49 49.0
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-06 56.6 41 63.4
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-06 56.2 76 43.4
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-06 55.8 48 47.9
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-06 55.5 50 46.0
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 4.1e-06 54.7 52 51.9
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-06 54.7 50 48.0
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-06 54.3 50 44.0


User provided reference genes

Program Settings