Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g051240.1 Solanum lycopersicum HOM05D000053 ORTHO05D051023 8.1e-31 136.3 65 100.0
CAN.G575.121 Capsicum annuum HOM05D000002 ORTHO05D000001 2.1e-15 85.1 62 62.9
CAN.G2177.3 Capsicum annuum HOM05D000053 ORTHO05D000035 6.3e-15 83.6 57 64.9
CAN.G1816.6 Capsicum annuum HOM05D000235 ORTHO05D000035 1.4e-14 82.4 62 61.3
CAN.G866.29 Capsicum annuum HOM05D000053 ORTHO05D000035 1.9e-11 72.0 50 62.0
CAN.G1833.4 Capsicum annuum HOM05D000053 ORTHO05D000035 7.2e-11 70.1 50 64.0
CAN.G515.2 Capsicum annuum HOM05D000053 ORTHO05D000035 2.1e-10 68.6 50 58.0
CAN.G410.22 Capsicum annuum HOM05D000053 ORTHO05D000035 7.9e-10 66.6 53 60.4
Nitab4.5_0008247g0070 Nicotiana tabacum HOM05D000053 ORTHO05D000035 1.0e-09 66.2 62 54.8
CSS0001284 Camellia sinensis var. sinensis HOM05D000053 ORTHO05D000035 1.8e-09 65.5 70 41.4
CSS0002068 Camellia sinensis var. sinensis HOM05D000053 ORTHO05D000035 1.8e-09 65.5 70 41.4
CAN.G575.104 Capsicum annuum HOM05D000033 ORTHO05D007915 2.3e-09 65.1 62 51.6
CAN.G1735.6 Capsicum annuum HOM05D000053 ORTHO05D000035 6.7e-09 63.5 60 51.7
CAN.G21.6 Capsicum annuum HOM05D000132 ORTHO05D000058 6.7e-09 63.5 50 60.0
PGSC0003DMG400023869 Solanum tuberosum HOM05D000053 ORTHO05D000035 6.7e-09 63.5 83 37.3
Duzib212G0838 Durio zibethinus HOM05D000053 ORTHO05D000448 8.7e-09 63.2 55 54.5
Peaxi162Scf00635g00018 Petunia axillaris HOM05D000053 ORTHO05D000035 8.7e-09 63.2 51 54.9
Gohir.D10G139800 Gossypium hirsutum HOM05D000053 ORTHO05D000448 1.1e-08 62.8 60 51.7
Solyc12g099980.3 Solanum lycopersicum HOM05D000053 ORTHO05D000035 4.3e-08 60.8 33 78.8
Sopen12g034600 Solanum pennellii HOM05D000053 ORTHO05D000035 4.3e-08 60.8 33 78.8
CAN.G575.122 Capsicum annuum HOM05D000053 ORTHO05D000035 9.7e-08 59.7 51 54.9
Cc01_g08180 Coffea canephora HOM05D000053 ORTHO05D000035 9.7e-08 59.7 64 46.9
Gohir.A04G006780 Gossypium hirsutum HOM05D000053 ORTHO05D000035 9.7e-08 59.7 63 42.9
Gohir.D05G381700 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.6e-07 58.9 62 45.2
Gohir.A04G042160 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.2e-07 58.5 65 44.6
Gohir.A04G007200 Gossypium hirsutum HOM05D000053 ORTHO05D000035 3.7e-07 57.8 62 45.2
Gohir.D05G375900 Gossypium hirsutum HOM05D000053 ORTHO05D000035 3.7e-07 57.8 85 36.5
Medtr3g031520 Medicago truncatula HOM05D000071 ORTHO05D000029 3.7e-07 57.8 60 48.3
Prupe.4G233100 Prunus persica HOM05D000053 ORTHO05D000035 3.7e-07 57.8 60 45.0
Sopen01g002540 Solanum pennellii HOM05D000053 ORTHO05D000035 3.7e-07 57.8 50 52.0
Solyc07g047745.1 Solanum lycopersicum HOM05D000053 ORTHO05D051023 4.8e-07 57.4 33 75.8
Duzib212G0726 Durio zibethinus HOM05D000053 ORTHO05D000448 6.3e-07 57.0 56 53.6
Gohir.A04G005750 Gossypium hirsutum HOM05D000053 ORTHO05D000035 6.3e-07 57.0 73 39.7
Gohir.D05G376800 Gossypium hirsutum HOM05D000053 ORTHO05D000035 6.3e-07 57.0 62 43.5
Gohir.D05G381920 Gossypium hirsutum HOM05D000053 ORTHO05D000035 6.3e-07 57.0 62 43.5
QL04p067907 Quercus lobata HOM05D000053 ORTHO05D000035 6.3e-07 57.0 53 49.1
CAN.G282.37 Capsicum annuum HOM05D000053 ORTHO05D000035 1.1e-06 56.2 50 44.0
Haze_16210 Corylus avellana HOM05D000053 ORTHO05D000448 1.1e-06 56.2 57 40.4
Duzib093G1648 Durio zibethinus HOM05D000053 ORTHO05D000035 1.1e-06 56.2 84 33.3
Gorai.009G448000 Gossypium raimondii HOM05D000053 ORTHO05D000035 1.1e-06 56.2 62 41.9
Gohir.A04G007050 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.4e-06 55.8 85 35.3
arahy.Tifrunner.gnm1.ann1.JFW9YK Arachis hypogaea HOM05D000053 ORTHO05D000448 1.8e-06 55.5 55 45.5
CAN.G383.13 Capsicum annuum HOM05D000185 ORTHO05D000105 1.8e-06 55.5 41 61.0
Duzib268G0774 Durio zibethinus HOM05D000053 ORTHO05D000035 1.8e-06 55.5 62 40.3
Gohir.A04G006720 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.8e-06 55.5 63 39.7
Gohir.A04G042200 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.8e-06 55.5 63 46.0
Gohir.D05G375400 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.8e-06 55.5 85 35.3
Gohir.D05G376166 Gossypium hirsutum HOM05D000053 ORTHO05D000035 1.8e-06 55.5 85 34.1
Thecc.07G020000 Theobroma cacao HOM05D000053 ORTHO05D000035 1.8e-06 55.5 57 45.6
COL.COLO4_23002 Corchorus olitorius HOM05D000053 ORTHO05D000035 2.4e-06 55.1 62 40.3
Duzib213G0804 Durio zibethinus HOM05D000053 ORTHO05D029263 2.4e-06 55.1 57 50.9
Gohir.A04G006840 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.4e-06 55.1 85 32.9
Gohir.D05G376100 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.4e-06 55.1 85 35.3
Gohir.D05G380600 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.4e-06 55.1 62 41.9
Gohir.D05G381666 Gossypium hirsutum HOM05D000053 ORTHO05D000035 2.4e-06 55.1 62 41.9
Gorai.009G448100 Gossypium raimondii HOM05D000053 ORTHO05D000035 2.4e-06 55.1 85 34.1
Gorai.009G448200 Gossypium raimondii HOM05D000053 ORTHO05D000035 2.4e-06 55.1 85 32.9
Gorai.009G448500 Gossypium raimondii HOM05D000053 ORTHO05D000035 2.4e-06 55.1 85 34.1
Manes.10G026700 Manihot esculenta HOM05D000053 ORTHO05D000035 2.4e-06 55.1 61 44.3
QL07p034494 Quercus lobata HOM05D000053 ORTHO05D000448 2.4e-06 55.1 58 44.8
Gohir.D05G381301 Gossypium hirsutum HOM05D000053 ORTHO05D000035 3.1e-06 54.7 85 34.1
Gorai.009G444200 Gossypium raimondii HOM05D000053 ORTHO05D000035 3.1e-06 54.7 85 34.1
Gorai.009G448600 Gossypium raimondii HOM05D000053 ORTHO05D000035 3.1e-06 54.7 62 41.9
Nitab4.5_0001846g0010 Nicotiana tabacum HOM05D000053 ORTHO05D000035 3.1e-06 54.7 59 40.7
Potri.011G021216 Populus trichocarpa HOM05D000053 ORTHO05D000035 3.1e-06 54.7 60 43.3
PGSC0003DMG400033632 Solanum tuberosum HOM05D000053 ORTHO05D000035 3.1e-06 54.7 48 54.2
Gohir.A04G006900 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.1e-06 54.3 63 39.7
Gohir.D05G376232 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.1e-06 54.3 62 41.9
Gohir.D05G380400 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.1e-06 54.3 85 34.1
Gohir.D05G381500 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.1e-06 54.3 85 32.9
Gohir.D05G381900 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.1e-06 54.3 62 41.9
Gorai.009G447900 Gossypium raimondii HOM05D000053 ORTHO05D000035 4.1e-06 54.3 85 34.1
Thecc.07G019900 Theobroma cacao HOM05D000053 ORTHO05D000035 4.1e-06 54.3 59 45.8
Gohir.D05G380200 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.3e-06 53.9 85 35.3
Gohir.D05G381000 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.3e-06 53.9 85 32.9
Thecc.07G020800 Theobroma cacao HOM05D000053 ORTHO05D000035 5.3e-06 53.9 61 42.6
Duzib268G1127 Durio zibethinus HOM05D000053 ORTHO05D000035 6.9e-06 53.5 61 41.0
Gohir.D05G375800 Gossypium hirsutum HOM05D000053 ORTHO05D000035 6.9e-06 53.5 85 34.1
Gohir.D05G380100 Gossypium hirsutum HOM05D000053 ORTHO05D000035 6.9e-06 53.5 62 40.3
Gohir.D05G382000 Gossypium hirsutum HOM05D000053 ORTHO05D000035 6.9e-06 53.5 49 51.0
Gorai.005G029400 Gossypium raimondii HOM05D000053 ORTHO05D000448 6.9e-06 53.5 53 50.9
Gorai.009G444500 Gossypium raimondii HOM05D000053 ORTHO05D000035 6.9e-06 53.5 62 40.3
Peaxi162Scf00209g00022 Petunia axillaris HOM05D000053 ORTHO05D000035 6.9e-06 53.5 61 39.3
COL.COLO4_38379 Corchorus olitorius HOM05D000053 ORTHO05D000035 9.0e-06 53.1 85 32.9
Gohir.D05G375300 Gossypium hirsutum HOM05D000053 ORTHO05D000035 9.0e-06 53.1 85 32.9
Gohir.D05G376366 Gossypium hirsutum HOM05D000053 ORTHO05D000035 9.0e-06 53.1 61 41.0
Gohir.D05G376601 Gossypium hirsutum HOM05D000053 ORTHO05D000035 9.0e-06 53.1 85 34.1


User provided reference genes

Program Settings