Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g049230.1 Solanum lycopersicum HOM05D000009 ORTHO05D000001 6.0e-28 126.7 61 100.0
Sopen10g020320 Solanum pennellii HOM05D000006 ORTHO05D000001 3.8e-22 107.5 54 94.4
PGSC0003DMG401019148 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.1e-16 87.8 61 70.5
PGSC0003DMG402004425 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.3e-16 87.0 48 81.2
PGSC0003DMG400011045 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.5e-15 85.5 61 70.5
PGSC0003DMG400019418 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.0e-15 85.1 48 79.2
Solyc10g085460.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.4e-15 84.3 61 68.9
PGSC0003DMG400008393 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.4e-15 84.3 48 77.1
PGSC0003DMG400008595 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.4e-15 84.3 48 79.2
PGSC0003DMG401004423 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.5e-15 84.0 48 79.2
Sopen10g024500 Solanum pennellii HOM05D000009 ORTHO05D000008 5.9e-15 83.6 48 72.9
Sopen10g034900 Solanum pennellii HOM05D000009 ORTHO05D000008 5.9e-15 83.6 61 68.9
PGSC0003DMG400010944 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.7e-15 83.2 48 77.1
PGSC0003DMG400011109 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.7e-15 83.2 61 70.5
PGSC0003DMG400021779 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.7e-15 83.2 48 77.1
PGSC0003DMG400028001 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.7e-15 83.2 48 77.1
Nitab4.5_0000381g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.0e-14 82.8 48 79.2
PGSC0003DMG402008383 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.0e-14 82.8 61 67.2
Nitab4.5_0000381g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.3e-14 82.4 48 79.2
Nitab4.5_0000381g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.3e-14 82.4 48 79.2
Sopen10g035990 Solanum pennellii HOM05D000009 ORTHO05D000008 1.3e-14 82.4 48 79.2
PGSC0003DMG400008596 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.2e-14 81.6 48 75.0
PGSC0003DMG400026666 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.2e-14 81.6 48 79.2
Nitab4.5_0000381g0060 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.8e-14 80.9 48 79.2
Nitab4.5_0001192g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.8e-14 80.9 61 65.6
PGSC0003DMG400025683 Solanum tuberosum HOM05D000009 ORTHO05D000008 6.5e-14 80.1 61 65.6
PGSC0003DMG400008394 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.4e-13 79.0 61 63.9
Nitab4.5_0008387g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.2e-13 77.8 48 75.0
PGSC0003DMG402011117 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.2e-13 77.8 48 72.9
PGSC0003DMG400011111 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.1e-12 75.1 48 68.8
Peaxi162Scf00146g00132 Petunia axillaris HOM05D000009 ORTHO05D000008 4.6e-12 73.9 61 62.3
Peaxi162Scf00146g00131 Petunia axillaris HOM05D000009 ORTHO05D000008 6.1e-12 73.6 48 72.9
Solyc10g086590.3 Solanum lycopersicum HOM05D000009 ORTHO05D020487 1.8e-11 72.0 44 77.3
Nitab4.5_0008402g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.7e-11 70.1 48 68.8
Peaxi162Scf00009g00081 Petunia axillaris HOM05D000009 ORTHO05D000008 1.7e-09 65.5 62 58.1
Peaxi162Scf00818g10014 Petunia axillaris HOM05D000009 ORTHO05D000008 1.2e-07 59.3 49 59.2
Cc03_g14580 Coffea canephora HOM05D000009 ORTHO05D000008 1.5e-07 58.9 47 57.4
Cc00_g24960 Coffea canephora HOM05D000009 ORTHO05D000008 4.5e-07 57.4 47 51.1
Cc01_g03180 Coffea canephora HOM05D000009 ORTHO05D000008 7.7e-07 56.6 47 55.3
Cc03_g12710 Coffea canephora HOM05D000009 ORTHO05D000008 7.7e-07 56.6 46 50.0
PGSC0003DMG400012918 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.7e-07 56.6 49 55.1
Cc00_g17570 Coffea canephora HOM05D000009 ORTHO05D000008 1.0e-06 56.2 46 52.2
Nitab4.5_0000342g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.0e-06 56.2 31 80.6
Solyc05g021140.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.0e-06 56.2 47 57.4
PGSC0003DMG400008257 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.0e-06 56.2 41 73.2
Cc00_g18940 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-06 55.8 46 50.0
Cc00_g19510 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-06 55.8 60 45.0
Cc00_g20410 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-06 55.8 46 50.0
Cc00_g28310 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-06 55.8 46 50.0
Cc00_g09750 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-06 55.1 46 50.0
Cc00_g09790 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-06 55.1 46 50.0
Cc00_g31370 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-06 55.1 46 50.0
Cc03_g12820 Coffea canephora HOM05D000009 ORTHO05D000008 2.9e-06 54.7 47 51.1
Cc00_g27390 Coffea canephora HOM05D000009 ORTHO05D000008 3.8e-06 54.3 46 47.8
Cc03_g12670 Coffea canephora HOM05D000009 ORTHO05D000008 3.8e-06 54.3 47 48.9
Cc00_g09730 Coffea canephora HOM05D000009 ORTHO05D000008 5.0e-06 53.9 46 50.0
Cc03_g09340 Coffea canephora HOM05D000009 ORTHO05D000008 5.0e-06 53.9 46 50.0
Sopen10g024440 Solanum pennellii HOM05D000009 ORTHO05D000008 5.0e-06 53.9 30 80.0
Solyc02g030290.1 Solanum lycopersicum HOM05D000009 ORTHO05D030387 8.5e-06 53.1 49 51.0


User provided reference genes

Program Settings