Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g048060.2 Solanum lycopersicum HOM05D008105 ORTHO05D010309 5.1e-81 304.3 148 100.0
PGSC0003DMG400019855 Solanum tuberosum HOM05D008105 ORTHO05D010309 6.7e-81 303.9 147 100.0
DCAR_024277 Daucus carota HOM05D008105 ORTHO05D010309 5.9e-61 237.7 143 81.8
DCAR_031801 Daucus carota HOM05D008105 ORTHO05D010309 5.9e-61 237.7 143 81.8
Nitab4.5_0000886g0210 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.0e-57 226.9 145 79.3
TPR.G40844 Trifolium pratense HOM05D008105 ORTHO05D010309 1.4e-54 216.5 117 91.5
Nitab4.5_0012260g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 4.5e-53 211.5 144 76.4
Lsat_1_v5_gn_7_25421 Lactuca sativa HOM05D008105 ORTHO05D010309 2.7e-50 202.2 117 84.6
Lsat_1_v5_gn_7_101141 Lactuca sativa HOM05D008105 ORTHO05D010309 1.8e-49 199.5 117 82.9
Lsat_1_v5_gn_0_34941 Lactuca sativa HOM05D008105 ORTHO05D010309 8.3e-47 190.7 117 81.2
Lsat_1_v5_gn_3_92260 Lactuca sativa HOM05D008105 ORTHO05D010309 8.3e-47 190.7 117 81.2
Lsat_1_v5_gn_9_5080 Lactuca sativa HOM05D008105 ORTHO05D010309 5.4e-46 188.0 110 83.6
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 5.5e-43 177.9 84 98.8
Nn1g10137 Nelumbo nucifera HOM05D008105 ORTHO05D010309 9.5e-43 177.2 118 78.8
Lsat_1_v5_gn_5_16381 Lactuca sativa HOM05D008105 ORTHO05D010309 2.8e-42 175.6 117 76.1
unitig_87.g27955 Utricularia gibba HOM05D008105 ORTHO05D010309 3.0e-41 172.2 110 77.3
Nitab4.5_0002095g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 8.9e-41 170.6 146 63.0
Nitab4.5_0002418g0140 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.6e-37 159.8 88 85.2
arahy.Tifrunner.gnm1.ann1.CS557D Arachis hypogaea HOM05D008105 ORTHO05D010309 4.5e-37 158.3 104 72.1
Hma1.2p1_1191F.1_g265450 Hydrangea macrophylla HOM05D008105 ORTHO05D010309 1.6e-34 149.8 94 77.7
ClCG02G013160 Citrullus lanatus HOM05D008105 ORTHO05D010309 4.4e-32 141.7 153 52.9
Lsat_1_v5_gn_4_65960 Lactuca sativa HOM05D008105 ORTHO05D010309 7.5e-32 141.0 117 63.2
GSVIVG01013601001 Vitis vinifera HOM05D008105 ORTHO05D010309 4.9e-31 138.3 77 84.4
ATMG00030 Arabidopsis thaliana HOM05D008105 ORTHO05D010309 6.4e-31 137.9 76 82.9
BNapus_Darmor_BZH_scaffold_234p00090 Brassica napus HOM05D008105 ORTHO05D010309 6.4e-31 137.9 62 98.4
CARHR282600 Cardamine hirsuta HOM05D008105 ORTHO05D010309 6.4e-31 137.9 76 82.9
Nitab4.5_0001607g0060 Nicotiana tabacum HOM05D008105 ORTHO05D010309 8.3e-31 137.5 136 58.8
C04p19700 Brassica napus HOM05D008105 ORTHO05D010309 9.2e-30 134.0 62 95.2
Potri.007G062282 Populus trichocarpa HOM05D008105 ORTHO05D010309 1.2e-29 133.7 88 76.1
Migut.I00280 Erythranthe guttata HOM05D008105 ORTHO05D010309 7.8e-29 131.0 63 93.7
CsaV3_UNG208290 Cucumis sativus L. HOM05D008105 ORTHO05D010309 1.5e-27 126.7 58 96.6
CsaV3_UNG208900 Cucumis sativus L. HOM05D008105 ORTHO05D010309 1.5e-27 126.7 58 96.6
SHI53302 Sapria himalayana HOM05D008105 ORTHO05D010309 5.6e-27 124.8 56 98.2
Nitab4.5_0008578g0040 Nicotiana tabacum HOM05D008105 ORTHO05D010309 6.2e-26 121.3 89 75.3
TPR.G25507 Trifolium pratense HOM05D008105 ORTHO05D010309 6.2e-26 121.3 56 94.6
SHI46576 Sapria himalayana HOM05D008105 ORTHO05D010309 1.4e-25 120.2 56 92.9
SHI47522 Sapria himalayana HOM05D008105 ORTHO05D010309 1.4e-25 120.2 56 92.9
TPR.G23916 Trifolium pratense HOM05D008105 ORTHO05D010309 1.4e-25 120.2 56 94.6
SHI54884 Sapria himalayana HOM05D008105 ORTHO05D010309 2.3e-25 119.4 56 94.6
Nitab4.5_0006089g0080 Nicotiana tabacum HOM05D008105 ORTHO05D010309 4.9e-23 111.7 66 83.3
Nitab4.5_0006806g0130 Nicotiana tabacum HOM05D008105 ORTHO05D010309 4.9e-23 111.7 89 68.5
Nitab4.5_0011987g0030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.2e-21 107.1 58 82.8
SGA_v2.0_scaffold255G45599 Striga asiatica HOM05D008105 ORTHO05D010309 5.6e-19 98.2 47 91.5
Lsat_1_v5_gn_1_61481 Lactuca sativa HOM05D008105 ORTHO05D010309 1.8e-17 93.2 72 72.2
DCAR_028367 Daucus carota HOM05D008105 ORTHO05D010309 2.3e-17 92.8 41 100.0
ClCG06G007950 Citrullus lanatus HOM05D008105 ORTHO05D010309 1.5e-16 90.1 73 65.8
SHI43693 Sapria himalayana HOM05D008105 ORTHO05D010309 1.3e-15 87.0 39 92.3
Migut.H01107 Erythranthe guttata HOM05D008105 ORTHO05D010309 7.1e-14 81.3 82 57.3
SHI14716 Sapria himalayana HOM05D008105 ORTHO05D010309 6.6e-12 74.7 42 81.0
arahy.Tifrunner.gnm1.ann1.DTZ4L4 Arachis hypogaea HOM05D008105 ORTHO05D010309 1.5e-11 73.6 36 88.9
Dinv06662 Davidia involucrata HOM05D008105 ORTHO05D010309 1.5e-11 73.6 40 87.5
Dinv06742 Davidia involucrata HOM05D008105 ORTHO05D010309 1.5e-11 73.6 40 87.5
Gohir.D01G116732 Gossypium hirsutum HOM05D008105 ORTHO05D010309 2.5e-11 72.8 40 82.5
Mapoly0028s0112 Marchantia polymorpha HOM05D008105 ORTHO05D010309 9.5e-11 70.9 50 64.0
Nitab4.5_0000172g1030 Nicotiana tabacum HOM05D008105 ORTHO05D010309 1.6e-10 70.1 34 88.2
Nitab4.5_0000031g0160 Nicotiana tabacum HOM05D008105 ORTHO05D010309 4.7e-10 68.6 53 64.2
Nitab4.5_0000405g0010 Nicotiana tabacum HOM05D008105 ORTHO05D010309 8.1e-10 67.8 36 88.9
GSVIVG01014508001 Vitis vinifera HOM05D008105 ORTHO05D010309 2.4e-09 66.2 31 96.8
Medtr3g110480 Medicago truncatula HOM05D008105 ORTHO05D010309 2.0e-08 63.2 52 59.6
SHI24158 Sapria himalayana HOM05D008105 ORTHO05D010309 1.9e-06 56.6 45 60.0
SHI10636 Sapria himalayana HOM05D008105 ORTHO05D010309 2.4e-06 56.2 32 75.0


User provided reference genes

Program Settings