Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.2e-73 279.6 135 100.0
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 2.3e-72 275.4 135 97.8
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 4.9e-70 267.7 135 97.0
Solyc08g062785.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 2.2e-30 136.0 67 98.5
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-26 123.2 131 41.2
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-26 123.2 98 50.0
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-26 122.9 110 46.4
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.6e-26 121.3 133 39.1
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.3e-26 120.9 103 47.6
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.3e-26 120.9 98 51.0
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-25 119.4 110 45.5
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.8e-25 119.0 103 46.6
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-25 118.6 99 46.5
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-25 118.6 98 48.0
Sopen01g014170 Solanum pennellii HOM05D000017 ORTHO05D000013 8.1e-25 117.5 78 65.4
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.9e-24 114.4 99 44.4
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-23 113.6 98 48.0
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.4e-23 112.1 98 49.0
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-22 108.2 119 37.0
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.4e-21 104.8 110 39.1
Nitab4.5_0002373g0160 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.6e-20 101.7 98 45.9
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.0e-20 101.3 98 42.9
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-19 100.5 106 37.7
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-19 100.5 98 45.9
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-19 99.8 87 48.3
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.0e-19 99.0 130 36.2
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-18 97.1 89 49.4
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.4e-18 94.4 98 42.9
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 2.8e-17 92.4 103 40.8
Sopen09g026440 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-16 89.7 96 42.7
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.9e-16 87.8 108 37.0
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-15 87.0 98 40.8
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 2.0e-15 86.3 104 32.7
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-15 85.9 104 31.7
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.6e-15 84.3 104 36.5
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 2.9e-14 82.4 98 29.6
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-14 82.0 75 44.0
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-14 81.3 137 32.8
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-14 81.3 137 32.8
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 1.4e-13 80.1 98 33.7
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-13 79.7 98 29.6
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 2.4e-13 79.3 137 30.7
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.1e-13 77.8 96 29.2
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-13 77.8 93 34.4
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 7.1e-13 77.8 93 34.4
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 7.1e-13 77.8 93 34.4
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-13 77.8 93 34.4
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-13 77.8 93 34.4
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-13 77.8 137 30.7
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-13 77.8 93 34.4
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-12 77.0 85 38.8
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-12 76.6 93 34.4
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-12 76.6 93 33.3
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.7e-12 75.9 113 32.7
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.7e-12 75.9 108 35.2
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.6e-12 75.1 132 30.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 6.0e-12 74.7 110 30.0
Nitab4.5_0000036g0340 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.0e-12 74.7 107 33.6
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 6.0e-12 74.7 93 33.3
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-11 73.9 96 28.1
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-11 73.9 92 31.5
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-11 73.2 95 33.7
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-11 72.8 96 29.2
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 2.3e-11 72.8 95 34.7
Solyc04g050015.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 3.0e-11 72.4 94 40.4
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 3.9e-11 72.0 108 25.0
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-11 72.0 90 32.2
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-11 71.6 96 27.1
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-11 71.6 96 28.1
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-11 71.2 92 31.5
Nitab4.5_0003479g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.7e-11 71.2 52 51.9
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-10 70.5 94 33.0
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-10 70.1 96 28.1
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-10 70.1 96 27.1
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-10 70.1 96 27.1
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-10 70.1 102 33.3
CAN.G1079.3 Capsicum annuum HOM05D007248 ORTHO05D002765 1.9e-10 69.7 89 39.3
Nitab4.5_0002612g0070 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-10 69.7 62 45.2
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-10 69.3 92 30.4
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-10 69.3 102 33.3
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-10 69.3 102 32.4
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-10 68.9 92 30.4
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-10 68.9 102 33.3
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-10 68.2 92 29.3
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-10 68.2 106 26.4
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.4e-10 67.8 98 31.6
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.4e-10 67.8 96 28.1
Sopen01g015850 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-10 67.8 59 49.2
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.6e-10 67.4 96 27.1
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 9.6e-10 67.4 145 26.2
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 1.3e-09 67.0 132 25.0
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.3e-09 67.0 98 32.7
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.3e-09 67.0 113 30.1
Nitab4.5_0000009g0470 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-09 66.6 61 45.9
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 1.6e-09 66.6 99 30.3
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 2.1e-09 66.2 99 24.2
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 2.1e-09 66.2 99 24.2
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 2.8e-09 65.9 123 25.2
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 3.7e-09 65.5 99 26.3
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 3.7e-09 65.5 99 25.3
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-09 65.1 96 28.1
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.8e-09 65.1 95 30.5
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.8e-09 65.1 102 31.4
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-09 65.1 92 31.5
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 4.8e-09 65.1 123 25.2
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 4.8e-09 65.1 123 25.2
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 8.2e-09 64.3 95 27.4
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.2e-09 64.3 98 27.6
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 8.2e-09 64.3 99 24.2
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 63.9 95 27.4
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 63.9 95 27.4
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 63.9 95 27.4
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 1.1e-08 63.9 95 27.4
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 1.1e-08 63.9 95 27.4
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 1.1e-08 63.9 123 26.0
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-08 63.5 94 29.8
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.4e-08 63.5 123 26.0
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 1.8e-08 63.2 99 27.3
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 1.8e-08 63.2 99 24.2
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-08 62.8 95 30.5
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 2.4e-08 62.8 123 24.4
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 3.1e-08 62.4 95 26.3
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 3.1e-08 62.4 95 26.3
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 3.1e-08 62.4 95 26.3
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 3.1e-08 62.4 95 26.3
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 3.1e-08 62.4 78 30.8
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 4.0e-08 62.0 93 26.9
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 4.0e-08 62.0 92 23.9
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.9e-08 61.2 80 27.5
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 9.0e-08 60.8 95 26.3
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.0e-08 60.8 102 33.3
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 60.5 94 25.5
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 60.5 96 25.0
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 60.5 92 29.3
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 1.2e-07 60.5 123 24.4
Nitab4.5_0003089g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-07 60.1 94 31.9
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.0e-07 59.7 85 32.9
Sopen10g008530 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-07 59.3 84 33.3
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 4.5e-07 58.5 97 24.7
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 4.5e-07 58.5 97 24.7
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-07 58.5 87 25.3
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.6e-07 57.8 96 26.0
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-06 57.0 97 26.8
Nitab4.5_0000444g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-06 56.6 47 46.8
Nitab4.5_0000797g0070 Nicotiana tabacum HOM05D009153 ORTHO05D011903 2.9e-06 55.8 59 28.8
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-06 55.8 92 29.3
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-06 55.8 92 26.1
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.8e-06 55.5 102 28.4
Oeu044344.1 Olea europaea HOM05D012404 ORTHO05D002765 3.8e-06 55.5 123 22.0
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-06 55.5 113 28.3
Nitab4.5_0002823g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.9e-06 55.1 40 52.5
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 4.9e-06 55.1 92 27.2
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-06 54.7 80 25.0


User provided reference genes

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