Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g045730.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 5.9e-62 240.7 125 100.0
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 8.6e-29 130.6 141 59.6
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 2.1e-27 125.9 140 60.7
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 4.7e-27 124.8 133 62.4
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.0e-26 122.1 143 58.0
Nitab4.5_0003945g0090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 4.0e-26 121.7 116 69.0
Solyc00g021630.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 8.9e-26 120.6 131 61.8
Sed0011263 Sechium edule HOM05D003517 ORTHO05D009794 5.8e-25 117.9 131 61.1
Sed0015872 Sechium edule HOM05D003517 ORTHO05D009794 5.8e-25 117.9 131 61.1
Nitab4.5_0000172g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009794 7.5e-25 117.5 133 59.4
CsaV3_UNG208670 Cucumis sativus L. HOM05D003517 ORTHO05D009794 1.7e-24 116.3 130 60.8
CAN.G1.11 Capsicum annuum HOM05D003517 ORTHO05D009794 2.9e-24 115.5 131 61.1
ATMG00270 Arabidopsis thaliana HOM05D003517 ORTHO05D009794 6.4e-24 114.4 131 59.5
BNapus_Darmor_BZH_scaffold_234p00290 Brassica napus HOM05D003517 ORTHO05D009794 6.4e-24 114.4 131 59.5
BolSC28t60338H Brassica oleracea HOM05D003517 ORTHO05D009794 6.4e-24 114.4 131 59.5
BolSC28t60397H Brassica oleracea HOM05D003517 ORTHO05D009794 6.4e-24 114.4 131 59.5
BraSC77t46643Z Brassica rapa HOM05D003517 ORTHO05D009794 6.4e-24 114.4 131 59.5
CARHR282730 Cardamine hirsuta HOM05D003517 ORTHO05D009794 6.4e-24 114.4 131 59.5
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 6.4e-24 114.4 134 59.0
CSS0025973 Camellia sinensis var. sinensis HOM05D003517 ORTHO05D009794 1.1e-23 113.6 131 59.5
CANSAT16G0040 Cannabis sativa HOM05D003517 ORTHO05D009794 1.1e-23 113.6 131 58.8
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.1e-23 113.6 136 58.1
RhsimMtG0007100 Rhododendron simsii HOM05D003517 ORTHO05D009794 1.4e-23 113.2 130 60.0
RcHm_v2.0_MTg0498991 Rosa chinensis HOM05D003517 ORTHO05D009794 2.4e-23 112.5 131 58.8
Sp3g25610 Schrenkiella parvula HOM05D003517 ORTHO05D009794 2.4e-23 112.5 131 58.8
HanXRQChr09g0237761 Helianthus annuus HOM05D003517 ORTHO05D009794 3.2e-23 112.1 131 60.3
HanXRQChr00c0234g0572741 Helianthus annuus HOM05D003517 ORTHO05D009794 4.1e-23 111.7 131 59.5
HanXRQMTg0579471 Helianthus annuus HOM05D003517 ORTHO05D009794 4.1e-23 111.7 131 59.5
Actinidia34878 Actinidia chinensis HOM05D003517 ORTHO05D009794 5.4e-23 111.3 112 64.3
Glyma.08G301000 Glycine max HOM05D003517 ORTHO05D009794 5.4e-23 111.3 131 58.8
Gorai.001G168000 Gossypium raimondii HOM05D003517 ORTHO05D009794 5.4e-23 111.3 133 58.6
Lj5g0026865 Lotus japonicus HOM05D003517 ORTHO05D009794 5.4e-23 111.3 131 58.8
LjContig00439g0001390 Lotus japonicus HOM05D003517 ORTHO05D009794 5.4e-23 111.3 131 58.8
LjContig00446g0016600 Lotus japonicus HOM05D003517 ORTHO05D009794 5.4e-23 111.3 131 58.8
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 7.0e-23 110.9 133 58.6
DCAR_032460 Daucus carota HOM05D003517 ORTHO05D009794 7.0e-23 110.9 131 58.8
Aa31csc798G10 Aethionema arabicum HOM05D003517 ORTHO05D009794 1.2e-22 110.2 100 68.0
HanXRQChr01g0013411 Helianthus annuus HOM05D003517 ORTHO05D009794 2.0e-22 109.4 131 58.8
Lj2P1233T102 Lonicera japonica HOM05D003517 ORTHO05D009794 2.0e-22 109.4 131 58.8
Lj2P1236T75 Lonicera japonica HOM05D003517 ORTHO05D009794 2.0e-22 109.4 131 58.8
Lalb_Chr00c21g0406031 Lupinus albus HOM05D003517 ORTHO05D009794 6.0e-22 107.8 131 57.3
Lalb_Chr00c39g0409031 Lupinus albus HOM05D003517 ORTHO05D009794 6.0e-22 107.8 131 57.3
Lalb_Chr00c39g0409211 Lupinus albus HOM05D003517 ORTHO05D009794 6.0e-22 107.8 131 57.3
Lalb_Chr00c51g0413121 Lupinus albus HOM05D003517 ORTHO05D009794 6.0e-22 107.8 131 57.3
HanXRQChr02g0049481 Helianthus annuus HOM05D003517 ORTHO05D009794 7.8e-22 107.5 116 60.3
Gohir.A03G108600 Gossypium hirsutum HOM05D003517 ORTHO05D009794 1.0e-21 107.1 131 58.0
arahy.Tifrunner.gnm1.ann1.N584HR Arachis hypogaea HOM05D003517 ORTHO05D009794 1.3e-21 106.7 130 58.5
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.3e-21 106.7 97 68.0
Nn003s41395 Nelumbo nucifera HOM05D003517 ORTHO05D009794 3.0e-21 105.5 131 56.5
Nn1g09965 Nelumbo nucifera HOM05D003517 ORTHO05D009794 3.0e-21 105.5 131 56.5
Nn1g10124 Nelumbo nucifera HOM05D003517 ORTHO05D009794 3.0e-21 105.5 131 56.5
SHI35306 Sapria himalayana HOM05D003517 ORTHO05D009794 8.6e-21 104.0 132 56.8
SHI49089 Sapria himalayana HOM05D003517 ORTHO05D009794 8.6e-21 104.0 132 56.8
TPR.G40594 Trifolium pratense HOM05D003517 ORTHO05D009794 8.6e-21 104.0 125 57.6
Nitab4.5_0001152g0960 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.9e-20 102.8 140 52.1
SHI53309 Sapria himalayana HOM05D003517 ORTHO05D009794 2.5e-20 102.4 132 56.1
Aqoxy38s018 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 5.6e-20 101.3 131 55.7
HanXRQChr05g0138851 Helianthus annuus HOM05D003517 ORTHO05D009794 2.3e-18 95.9 92 65.2
BraSC159t45725Z Brassica rapa HOM05D003517 ORTHO05D009794 8.9e-18 94.0 89 66.3
Ca_03783_v3 Cicer arietinum L. HOM05D009973 ORTHO05D009794 3.4e-17 92.0 90 64.4
MBI05_g05356_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009794 5.8e-17 91.3 123 52.8
Gohir.A08G086024 Gossypium hirsutum HOM05D003517 ORTHO05D009794 7.5e-17 90.9 131 52.7
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.3e-16 90.1 79 70.9
VMungo0985G0003 Vigna mungo HOM05D003517 ORTHO05D009794 1.7e-16 89.7 88 65.9
LjContig00315g0004708 Lotus japonicus HOM05D003517 ORTHO05D009794 2.4e-15 85.9 124 52.4
Pp3c12_12240 Physcomitrium patens HOM05D003517 ORTHO05D009794 5.1e-13 78.2 132 43.9
SabraMtG0003300 Salix brachista HOM05D003517 ORTHO05D009794 1.8e-10 69.7 86 55.8
CDE02G3221 Ceratophyllum demersum HOM05D003517 ORTHO05D009794 4.4e-09 65.1 87 51.7
Sp5g20260 Schrenkiella parvula HOM05D003517 ORTHO05D009794 4.4e-09 65.1 120 46.7
unitig_0.g2040 Utricularia gibba HOM05D003517 ORTHO05D009794 2.9e-08 62.4 83 53.0
Aqoxy12s041 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 8.3e-08 60.8 68 63.2
Nitab4.5_0001152g0290 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.4e-07 59.3 65 58.5
Solyc11g030930.3 Solanum lycopersicum HOM05D003517 ORTHO05D009794 2.4e-07 59.3 51 68.6
HanXRQChr05g0138841 Helianthus annuus HOM05D003517 ORTHO05D009794 7.1e-07 57.8 66 60.6


User provided reference genes

Program Settings