Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g045590.1 Solanum lycopersicum HOM05D000486 ORTHO05D000375 3.0e-34 147.9 73 100.0
Sopen10g035060 Solanum pennellii HOM05D000486 ORTHO05D000375 9.5e-12 73.2 43 81.4
Solyc10g085650.2 Solanum lycopersicum HOM05D000486 ORTHO05D000375 1.2e-11 72.8 43 81.4
PGSC0003DMG400042880 Solanum tuberosum HOM05D000486 ORTHO05D000375 1.2e-11 72.8 44 81.8
PGSC0003DMG400046915 Solanum tuberosum HOM05D000486 ORTHO05D000375 3.1e-10 68.2 44 75.0
Nitab4.5_0011403g0010 Nicotiana tabacum HOM05D000486 ORTHO05D000375 8.9e-10 66.6 44 72.7
Nitab4.5_0001875g0120 Nicotiana tabacum HOM05D000486 ORTHO05D000375 1.2e-09 66.2 121 39.7
Solyc10g085640.1 Solanum lycopersicum HOM05D000486 ORTHO05D000375 1.2e-09 66.2 66 53.0
Sopen10g035050 Solanum pennellii HOM05D000486 ORTHO05D000375 1.2e-09 66.2 66 53.0
PGSC0003DMG400008388 Solanum tuberosum HOM05D000486 ORTHO05D000375 1.2e-09 66.2 66 53.0
Oeu047849.1 Olea europaea HOM05D000486 ORTHO05D000375 2.6e-09 65.1 67 55.2
CAN.G1069.11 Capsicum annuum HOM05D000486 ORTHO05D000375 3.4e-09 64.7 40 75.0
Peaxi162Scf00096g00715 Petunia axillaris HOM05D000486 ORTHO05D000375 4.4e-09 64.3 68 48.5
MSTRG.19273 Avicennia marina HOM05D000486 ORTHO05D000375 5.8e-09 63.9 67 50.7
Nitab4.5_0001933g0080 Nicotiana tabacum HOM05D000486 ORTHO05D000375 7.5e-09 63.5 69 52.2
Nitab4.5_0001875g0040 Nicotiana tabacum HOM05D000486 ORTHO05D000375 9.8e-09 63.2 62 54.8
Nitab4.5_0003404g0020 Nicotiana tabacum HOM05D000486 ORTHO05D000375 9.8e-09 63.2 66 53.0
Peaxi162Scf00146g00812 Petunia axillaris HOM05D000486 ORTHO05D000375 9.8e-09 63.2 71 52.1
Peaxi162Scf00146g00813 Petunia axillaris HOM05D000486 ORTHO05D000375 9.8e-09 63.2 71 52.1
Solyc10g083300.2 Solanum lycopersicum HOM05D000486 ORTHO05D000375 9.8e-09 63.2 40 72.5
Sopen10g032780 Solanum pennellii HOM05D000486 ORTHO05D000375 9.8e-09 63.2 40 72.5
Solyc09g010080.3 Solanum lycopersicum HOM05D000486 ORTHO05D000375 1.3e-08 62.8 66 53.0
unitig_8.g4972 Utricularia gibba HOM05D000486 ORTHO05D000375 1.7e-08 62.4 73 50.7
MSTRG.26629 Avicennia marina HOM05D000486 ORTHO05D000375 2.9e-08 61.6 70 51.4
MSTRG.8562 Avicennia marina HOM05D000486 ORTHO05D000375 2.9e-08 61.6 70 51.4
Peaxi162Scf00096g00716 Petunia axillaris HOM05D000486 ORTHO05D000375 2.9e-08 61.6 66 51.5
PGSC0003DMG400008942 Solanum tuberosum HOM05D000486 ORTHO05D000375 2.9e-08 61.6 67 50.7
CAN.G1018.14 Capsicum annuum HOM05D000486 ORTHO05D000375 3.7e-08 61.2 43 69.8
Peaxi162Scf00096g00825 Petunia axillaris HOM05D000486 ORTHO05D000375 3.7e-08 61.2 69 50.7
PGSC0003DMG401028252 Solanum tuberosum HOM05D000486 ORTHO05D000375 3.7e-08 61.2 40 70.0
MSTRG.5860 Avicennia marina HOM05D000486 ORTHO05D000375 4.9e-08 60.8 66 45.5
CAN.G397.78 Capsicum annuum HOM05D000486 ORTHO05D000375 4.9e-08 60.8 68 50.0
Solyc10g083290.4 Solanum lycopersicum HOM05D000486 ORTHO05D000375 4.9e-08 60.8 66 51.5
Sopen10g032770 Solanum pennellii HOM05D000486 ORTHO05D000375 4.9e-08 60.8 66 53.0
Sopen09g004830 Solanum pennellii HOM05D000486 ORTHO05D000375 6.4e-08 60.5 66 53.0
Nitab4.5_0001933g0060 Nicotiana tabacum HOM05D000486 ORTHO05D000375 8.3e-08 60.1 63 55.6
Peaxi162Scf00069g00810 Petunia axillaris HOM05D000486 ORTHO05D000375 8.3e-08 60.1 65 49.2
Sopen10g034810 Solanum pennellii HOM05D000486 ORTHO05D000375 8.3e-08 60.1 70 47.1
PGSC0003DMG402028252 Solanum tuberosum HOM05D000486 ORTHO05D000375 8.3e-08 60.1 65 49.2
Migut.L01797 Erythranthe guttata HOM05D000486 ORTHO05D000375 1.1e-07 59.7 70 47.1
Lj2A140T54 Lonicera japonica HOM05D000486 ORTHO05D000375 1.1e-07 59.7 55 52.7
Nitab4.5_0003404g0040 Nicotiana tabacum HOM05D000486 ORTHO05D000375 1.1e-07 59.7 65 50.8
Sopen09g004820 Solanum pennellii HOM05D000486 ORTHO05D000375 1.1e-07 59.7 65 49.2
vmacro07425 Vaccinium macrocarpon HOM05D000486 ORTHO05D000375 1.1e-07 59.7 69 44.9
Rhsim03G0073700 Rhododendron simsii HOM05D000486 ORTHO05D000375 1.4e-07 59.3 40 65.0
Cc00_g15520 Coffea canephora HOM05D000486 ORTHO05D000375 1.9e-07 58.9 65 52.3
DCAR_023361 Daucus carota HOM05D000486 ORTHO05D000375 1.9e-07 58.9 65 52.3
Solyc10g085360.3 Solanum lycopersicum HOM05D000486 ORTHO05D000375 1.9e-07 58.9 70 45.7
SGA_v2.0_scaffold184G39980 Striga asiatica HOM05D000486 ORTHO05D000375 1.9e-07 58.9 68 50.0
DCAR_013407 Daucus carota HOM05D000486 ORTHO05D000375 2.4e-07 58.5 67 46.3
Migut.J01013 Erythranthe guttata HOM05D000486 ORTHO05D000375 2.4e-07 58.5 67 46.3
MSTRG.5862 Avicennia marina HOM05D000486 ORTHO05D000375 3.2e-07 58.2 66 50.0
Migut.J01014 Erythranthe guttata HOM05D000486 ORTHO05D000375 3.2e-07 58.2 62 46.8
CAN.G397.79 Capsicum annuum HOM05D000486 ORTHO05D000375 4.1e-07 57.8 68 44.1
Eucgr.A02647 Eucalyptus grandis HOM05D000486 ORTHO05D000375 4.1e-07 57.8 38 68.4
CSS0039950 Camellia sinensis var. sinensis HOM05D000486 ORTHO05D000375 7.0e-07 57.0 38 65.8
Cc06_g06090 Coffea canephora HOM05D000486 ORTHO05D000375 9.2e-07 56.6 64 43.8
DCAR_020738 Daucus carota HOM05D000486 ORTHO05D000375 9.2e-07 56.6 65 47.7
PGSC0003DMG400008943 Solanum tuberosum HOM05D000486 ORTHO05D000375 9.2e-07 56.6 66 48.5
Ciclev10013701m.g Citrus clementina HOM05D000486 ORTHO05D000375 1.2e-06 56.2 40 60.0
Prupe.7G103200 Prunus persica HOM05D000486 ORTHO05D000375 1.2e-06 56.2 64 48.4
Prupe.7G103300 Prunus persica HOM05D000486 ORTHO05D000375 1.2e-06 56.2 65 46.2
Lalb_Chr14g0372781 Lupinus albus HOM05D000486 ORTHO05D000375 2.0e-06 55.5 45 60.0
Actinidia05413 Actinidia chinensis HOM05D000486 ORTHO05D000375 2.7e-06 55.1 64 46.9
Migut.J01015 Erythranthe guttata HOM05D000486 ORTHO05D000375 2.7e-06 55.1 68 45.6
MD14G1028500 Malus domestica HOM05D000486 ORTHO05D000375 2.7e-06 55.1 64 48.4
PGSC0003DMG400011037 Solanum tuberosum HOM05D000486 ORTHO05D000375 2.7e-06 55.1 70 42.9
TPR.G15222 Trifolium pratense HOM05D000486 ORTHO05D000375 2.7e-06 55.1 40 62.5
MELO3C010751.2 Cucumis melo HOM05D000486 ORTHO05D000375 3.5e-06 54.7 42 61.9
Duzib128G0196 Durio zibethinus HOM05D000486 ORTHO05D000375 3.5e-06 54.7 40 57.5
Gorai.006G153700 Gossypium raimondii HOM05D000486 ORTHO05D000375 3.5e-06 54.7 66 43.9
Thecc.05G092700 Theobroma cacao HOM05D000486 ORTHO05D000375 3.5e-06 54.7 66 42.4
Cfa016631 Carpinus fangiana HOM05D000486 ORTHO05D000375 4.6e-06 54.3 38 63.2
COL.COLO4_29692 Corchorus olitorius HOM05D000486 ORTHO05D000375 4.6e-06 54.3 40 60.0
Dinv31707 Davidia involucrata HOM05D000486 ORTHO05D000375 4.6e-06 54.3 64 43.8
Gohir.D09G134100 Gossypium hirsutum HOM05D000486 ORTHO05D000375 4.6e-06 54.3 66 42.4
Prupe.7G103400 Prunus persica HOM05D000486 ORTHO05D000375 4.6e-06 54.3 64 45.3
RcHm_v2.0_Chr3g0474371 Rosa chinensis HOM05D000486 ORTHO05D000375 4.6e-06 54.3 64 46.9
Sed0021015 Sechium edule HOM05D000486 ORTHO05D000375 4.6e-06 54.3 67 50.7
SGA_v2.0_scaffold13G06702 Striga asiatica HOM05D000486 ORTHO05D000375 4.6e-06 54.3 68 41.2
Ca_01207_v3 Cicer arietinum L. HOM05D000486 ORTHO05D000375 6.0e-06 53.9 40 62.5
Ciclev10025259m.g Citrus clementina HOM05D000486 ORTHO05D000375 6.0e-06 53.9 68 48.5
Cc06_g06080 Coffea canephora HOM05D000486 ORTHO05D000375 6.0e-06 53.9 67 44.8
CsaV3_2G025540 Cucumis sativus L. HOM05D000486 ORTHO05D000375 6.0e-06 53.9 42 59.5
Dinv31705 Davidia involucrata HOM05D000486 ORTHO05D000375 6.0e-06 53.9 64 43.8
Gohir.A09G140350 Gossypium hirsutum HOM05D000486 ORTHO05D000375 6.0e-06 53.9 65 43.1
Oeu025668.1 Olea europaea HOM05D000486 ORTHO05D000375 6.0e-06 53.9 64 48.4
Psat5g292240 Pisum sativum HOM05D000486 ORTHO05D000375 6.0e-06 53.9 40 60.0
Sc02g0000380 Simmondsia chinensis HOM05D000486 ORTHO05D000375 6.0e-06 53.9 66 43.9
arahy.Tifrunner.gnm1.ann1.5FJ8DC Arachis hypogaea HOM05D000486 ORTHO05D000375 7.8e-06 53.5 40 62.5
arahy.Tifrunner.gnm1.ann1.64GN3C Arachis hypogaea HOM05D000486 ORTHO05D000375 7.8e-06 53.5 40 62.5
Ciclev10027399m.g Citrus clementina HOM05D000486 ORTHO05D000375 7.8e-06 53.5 40 60.0
Cc06_g06110 Coffea canephora HOM05D000486 ORTHO05D000375 7.8e-06 53.5 64 42.2
Duzib128G0847 Durio zibethinus HOM05D000486 ORTHO05D000375 7.8e-06 53.5 40 55.0
Oeu002494.1 Olea europaea HOM05D000486 ORTHO05D000375 7.8e-06 53.5 64 43.8
SMO146G0203 Selaginella moellendorffii HOM05D000486 ORTHO05D000375 7.8e-06 53.5 44 56.8
TPR.G3218 Trifolium pratense HOM05D000486 ORTHO05D000375 7.8e-06 53.5 64 45.3
unitig_744.g24702 Utricularia gibba HOM05D000486 ORTHO05D000375 7.8e-06 53.5 39 66.7
GSVIVG01035390001 Vitis vinifera HOM05D000486 ORTHO05D000375 7.8e-06 53.5 44 56.8


User provided reference genes

Program Settings