Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.1e-167 593.2 299 100.0
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 5.2e-165 584.3 299 98.3
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.6e-161 572.8 299 95.7
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.7e-147 526.2 301 88.0
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 8.3e-147 523.9 303 87.5
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 5.1e-128 461.5 286 82.5
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 3.3e-127 458.8 303 79.5
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 5.8e-124 448.0 282 78.4
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 5.4e-122 441.4 293 77.5
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 3.9e-120 435.3 296 75.7
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 2.1e-118 429.5 267 79.4
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 3.6e-118 428.7 270 78.5
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.8e-117 426.4 265 79.6
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 2.4e-117 426.0 292 74.0
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.2e-116 423.7 302 70.5
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.5e-116 423.3 267 77.9
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 2.0e-116 422.9 277 75.8
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 7.6e-116 421.0 294 73.1
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 4.9e-115 418.3 260 79.2
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 2.4e-114 416.0 276 75.4
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 7.1e-114 414.5 259 78.8
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 9.3e-114 414.1 270 74.4
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 1.2e-113 413.7 299 69.6
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.6e-113 413.3 276 75.0
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.6e-113 413.3 272 74.3
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 3.5e-113 412.1 264 76.9
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.5e-113 412.1 297 70.4
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 3.5e-113 412.1 256 77.7
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 6.0e-113 411.4 295 70.5
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 7.9e-113 411.0 265 74.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.8e-112 409.8 285 72.3
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 3.0e-112 409.1 267 75.7
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 5.1e-112 408.3 318 67.6
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 6.7e-112 407.9 246 80.1
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 7.4e-111 404.4 266 74.4
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 1.6e-110 403.3 284 71.5
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.6e-110 403.3 266 73.7
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 3.7e-110 402.1 253 77.5
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.1e-109 400.6 254 76.8
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 2.4e-109 399.4 277 72.9
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 4.0e-109 398.7 282 68.8
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 4.0e-109 398.7 266 74.4
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 4.0e-109 398.7 270 73.7
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 4.0e-109 398.7 270 73.7
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.5e-108 396.7 267 74.2
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.4e-108 395.6 243 79.4
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.4e-108 395.6 243 79.4
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 3.4e-108 395.6 268 73.5
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 5.8e-108 394.8 274 72.3
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 5.8e-108 394.8 274 72.3
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 5.8e-108 394.8 274 72.3
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 7.6e-108 394.4 245 78.4
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 7.6e-108 394.4 271 71.6
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 1.3e-107 393.7 270 70.7
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.3e-107 393.7 268 72.4
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.7e-107 393.3 264 74.2
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 2.2e-107 392.9 243 77.4
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 8.4e-107 391.0 299 66.6
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 9.3e-106 387.5 282 69.1
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 1.3e-104 383.6 264 73.5
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.3e-104 383.6 282 68.8
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 5.1e-104 381.7 269 70.3
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 2.1e-102 376.3 266 72.2
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 8.2e-102 374.4 227 79.3
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 2.0e-100 369.8 343 57.4
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.8e-100 368.2 244 74.6
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.2e-98 362.5 261 70.9
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 1.8e-96 356.7 252 71.0
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 2.3e-96 356.3 221 78.3
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 9.7e-95 350.9 218 77.5
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 3.1e-93 345.9 218 78.4
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 6.9e-93 344.7 245 71.4
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 2.6e-92 342.8 238 72.7
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.6e-92 342.8 243 68.3
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 3.8e-91 339.0 204 81.4
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 4.6e-89 332.0 223 74.0
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.5e-87 327.0 213 75.1
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 2.5e-87 326.2 218 72.9
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 4.8e-86 322.0 249 64.3
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 2.4e-85 319.7 203 75.9
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 6.9e-85 318.2 271 60.9
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.0e-83 314.3 191 78.0
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 6.5e-83 311.6 254 60.2
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 3.3e-79 299.3 257 60.7
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 4.4e-79 298.9 204 73.5
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.4e-77 293.9 293 54.3
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.9e-75 286.2 251 59.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 9.4e-74 281.2 272 52.6
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 1.2e-73 280.8 166 79.5
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 4.4e-71 272.3 234 61.5
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 4.4e-71 272.3 187 70.6
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 6.3e-70 268.5 207 65.7
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 9.1e-69 264.6 245 54.7
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 1.1e-66 257.7 185 68.1
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.8e-64 250.4 223 57.4
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 4.8e-62 242.3 180 65.0
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 1.1e-61 241.1 202 62.9
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 3.8e-59 232.6 251 51.4
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 3.8e-51 206.1 161 65.8
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 8.9e-48 194.9 245 46.1
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 4.9e-46 189.1 152 63.2
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 2.1e-33 147.1 92 76.1
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 4.7e-33 146.0 94 75.5
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 4.6e-28 129.4 107 58.9
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 6.8e-24 115.5 88 64.8
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.4e-23 113.2 98 53.1
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 7.1e-21 105.5 119 48.7
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 7.1e-21 105.5 120 50.0
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 3.5e-20 103.2 62 82.3
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.9e-19 99.8 56 83.9
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 5.8e-15 85.9 98 45.9
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 2.9e-14 83.6 164 34.1
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 6.0e-12 75.9 51 76.5
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 5.1e-11 72.8 53 64.2
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 1.9e-10 70.9 41 68.3
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 2.0e-07 60.8 243 25.1
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.3e-06 58.2 54 55.6


User provided reference genes

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