Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 7.4e-149 530.4 250 100.0
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 8.2e-148 526.9 250 98.8
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 5.9e-114 414.5 272 76.5
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 3.9e-113 411.8 266 75.9
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 5.2e-110 401.4 267 74.5
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 9.8e-101 370.5 225 77.8
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 1.1e-99 367.1 223 77.6
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.2e-98 363.6 224 77.2
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 3.5e-98 362.1 249 71.5
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 4.6e-98 361.7 268 69.0
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 7.8e-98 360.9 222 76.6
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 1.3e-97 360.1 228 74.6
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 5.1e-97 358.2 216 79.2
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 8.6e-97 357.5 223 76.2
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 1.1e-96 357.1 215 79.5
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 4.3e-96 355.1 240 71.2
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 5.6e-96 354.8 217 77.4
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 9.5e-96 354.0 227 75.3
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 1.2e-95 353.6 245 69.8
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 2.8e-95 352.4 211 79.6
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 4.7e-95 351.7 214 79.0
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 6.2e-95 351.3 225 76.4
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 8.1e-95 350.9 217 76.0
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 1.1e-94 350.5 224 75.9
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 1.1e-94 350.5 229 74.7
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.4e-94 350.1 220 77.3
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.3e-94 349.4 218 75.2
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 3.1e-94 349.0 227 74.9
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 8.9e-94 347.4 223 75.3
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.2e-93 347.1 222 73.0
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 1.5e-93 346.7 228 72.8
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 1.5e-93 346.7 217 75.6
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 2.0e-93 346.3 203 78.8
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 2.0e-93 346.3 225 73.3
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 2.6e-93 345.9 223 75.3
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 4.4e-93 345.1 229 72.1
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 7.6e-93 344.4 244 70.9
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 9.9e-93 344.0 236 71.2
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 1.3e-92 343.6 212 77.8
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 1.7e-92 343.2 256 66.8
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 2.2e-92 342.8 244 70.5
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 3.8e-92 342.0 203 76.8
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 8.4e-92 340.9 208 77.4
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 8.4e-92 340.9 230 72.2
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 8.4e-92 340.9 225 72.4
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 1.1e-91 340.5 216 74.5
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.4e-91 340.1 244 70.1
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 1.9e-91 339.7 205 76.6
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 3.2e-91 339.0 220 72.7
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 5.4e-91 338.2 211 75.8
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.6e-90 336.7 223 74.4
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 4.6e-90 335.1 215 72.1
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 3.0e-89 332.4 218 72.9
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 5.1e-89 331.6 209 75.6
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 8.6e-89 330.9 215 73.0
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 2.5e-88 329.3 180 83.9
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 5.6e-88 328.2 255 62.4
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 5.6e-88 328.2 255 62.4
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 1.6e-87 326.6 236 68.6
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 2.1e-87 326.2 255 62.0
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 4.7e-87 325.1 231 68.4
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 6.2e-87 324.7 221 68.8
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 6.2e-87 324.7 221 68.3
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 3.1e-86 322.4 256 62.5
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 6.9e-86 321.2 221 68.3
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 6.9e-86 321.2 255 60.8
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 8.9e-86 320.9 230 67.4
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 1.5e-85 320.1 212 71.7
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 3.4e-85 318.9 256 60.5
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 9.9e-85 317.4 213 70.0
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.7e-84 316.6 218 68.3
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 1.1e-83 313.9 213 70.4
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 5.4e-83 311.6 216 67.6
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 7.1e-83 311.2 171 82.5
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 1.6e-82 310.1 218 67.0
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 5.1e-81 305.1 248 61.3
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 1.9e-80 303.1 247 64.4
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 3.3e-80 302.4 217 68.7
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 8.1e-79 297.7 217 69.1
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 4.0e-78 295.4 170 77.1
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 9.0e-78 294.3 200 72.5
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 1.5e-77 293.5 228 63.6
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 2.6e-77 292.7 202 68.3
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 2.2e-76 289.7 255 56.5
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 1.1e-75 287.3 225 64.4
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 5.4e-75 285.0 214 68.7
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 1.6e-74 283.5 212 65.6
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 7.9e-74 281.2 204 67.6
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 1.3e-73 280.4 186 73.7
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 2.3e-73 279.6 264 57.6
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 8.7e-73 277.7 212 61.8
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 3.6e-71 272.3 211 65.9
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 9.9e-69 264.2 218 61.5
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 2.2e-68 263.1 161 78.9
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 1.1e-67 260.8 194 62.9
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 1.6e-66 256.9 201 65.7
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 1.1e-64 250.8 174 69.0
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 2.5e-64 249.6 150 80.7
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 9.6e-64 247.7 169 72.8
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 2.8e-63 246.1 152 79.6
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 6.9e-62 241.5 186 58.6
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 9.0e-62 241.1 141 83.7
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 1.4e-54 217.2 204 52.9
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 6.9e-54 214.9 181 55.2
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 9.0e-54 214.5 209 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 5.9e-53 211.8 150 66.7
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 6.5e-52 208.4 117 82.1
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 1.4e-51 207.2 179 52.0
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 9.1e-46 188.0 118 77.1
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 1.2e-42 177.6 117 75.2
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 1.8e-41 173.7 181 49.2
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 1.7e-39 167.2 221 43.9
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.1e-38 162.9 123 64.2
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 8.5e-36 154.8 81 88.9
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.8e-33 147.1 76 89.5
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 7.7e-29 131.7 69 85.5
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 3.2e-27 126.3 118 43.2
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 8.0e-26 121.7 182 36.3
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 4.8e-23 112.5 58 87.9
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 2.0e-21 107.1 122 51.6
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 8.0e-18 95.1 51 86.3
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 5.2e-17 92.4 75 65.3
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 1.7e-15 87.4 45 84.4
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 6.3e-15 85.5 64 64.1
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 5.9e-13 79.0 44 77.3
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 1.1e-11 74.7 65 61.5
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 1.7e-07 60.8 68 45.6


User provided reference genes

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