Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g044620.2 Solanum lycopersicum HOM05D000716 ORTHO05D008300 4.2e-79 298.1 171 100.0
PGSC0003DMG400000837 Solanum tuberosum HOM05D000716 ORTHO05D008300 8.2e-14 81.3 184 38.6
Nitab4.5_0000316g0100 Nicotiana tabacum HOM05D000716 ORTHO05D008300 1.8e-13 80.1 184 38.6
PGSC0003DMG400000836 Solanum tuberosum HOM05D000716 ORTHO05D008300 4.1e-13 79.0 189 38.6
Peaxi162Scf00309g00334 Petunia axillaris HOM05D000716 ORTHO05D008300 1.5e-12 77.0 183 38.3
Solyc01g068490.4 Solanum lycopersicum HOM05D000716 ORTHO05D008300 2.0e-12 76.6 184 38.6
CAN.G1571.6 Capsicum annuum HOM05D000716 ORTHO05D008300 7.6e-12 74.7 175 39.4
COL.COLO4_35450 Corchorus olitorius HOM05D000716 ORTHO05D008300 7.6e-12 74.7 184 37.5
Nitab4.5_0001888g0050 Nicotiana tabacum HOM05D000716 ORTHO05D008300 7.6e-12 74.7 182 38.5
GSVIVG01001943001 Vitis vinifera HOM05D000716 ORTHO05D008300 2.2e-11 73.2 204 36.3
Duzib114G0335 Durio zibethinus HOM05D000716 ORTHO05D008300 2.9e-11 72.8 185 36.8
Gohir.D10G189200 Gossypium hirsutum HOM05D000716 ORTHO05D008300 2.9e-11 72.8 184 37.0
Actinidia14086 Actinidia chinensis HOM05D000716 ORTHO05D008300 3.8e-11 72.4 144 43.8
GSVIVG01000832001 Vitis vinifera HOM05D000716 ORTHO05D008300 6.5e-11 71.6 204 35.8
Gorai.011G212500 Gossypium raimondii HOM05D000716 ORTHO05D008300 1.1e-10 70.9 184 37.0
Prupe.2G030600 Prunus persica HOM05D000716 ORTHO05D008300 1.1e-10 70.9 184 37.5
Duzib128G1102 Durio zibethinus HOM05D000716 ORTHO05D008300 1.4e-10 70.5 171 38.6
Gohir.A10G182500 Gossypium hirsutum HOM05D000716 ORTHO05D008300 1.4e-10 70.5 184 36.4
DCAR_031825 Daucus carota HOM05D000716 ORTHO05D008300 4.2e-10 68.9 184 36.4
Glyma.12G040400 Glycine max HOM05D000716 ORTHO05D008300 4.2e-10 68.9 184 35.9
Thecc.10G170700 Theobroma cacao HOM05D000716 ORTHO05D008300 4.2e-10 68.9 184 35.9
TAR623G0975 Trochodendron aralioides HOM05D000716 ORTHO05D008300 9.3e-10 67.8 171 35.7
Ca_04529_v3 Cicer arietinum L. HOM05D000716 ORTHO05D008300 2.1e-09 66.6 200 34.0
Ca_30978_v3 Cicer arietinum L. HOM05D000716 ORTHO05D008300 2.1e-09 66.6 200 34.0
vmacro13734 Vaccinium macrocarpon HOM05D000716 ORTHO05D008300 3.5e-09 65.9 171 37.4
Medtr3g019360 Medicago truncatula HOM05D000716 ORTHO05D008300 4.6e-09 65.5 184 34.2
Actinidia06267 Actinidia chinensis HOM05D000716 ORTHO05D008300 7.9e-09 64.7 170 37.1
arahy.Tifrunner.gnm1.ann1.FKA8YF Arachis hypogaea HOM05D000716 ORTHO05D008300 7.9e-09 64.7 189 34.4
arahy.Tifrunner.gnm1.ann1.G6Z95W Arachis hypogaea HOM05D000716 ORTHO05D008300 7.9e-09 64.7 189 34.4
MBI19_g23016_MAGBIO Magnolia biondii HOM05D000716 ORTHO05D008300 7.9e-09 64.7 171 35.7
Phvul.005G031100 Phaseolus vulgaris HOM05D000716 ORTHO05D008300 7.9e-09 64.7 182 34.1
Sopen01g030450 Solanum pennellii HOM05D000716 ORTHO05D008300 7.9e-09 64.7 173 37.0
Glyma.11G152500 Glycine max HOM05D000716 ORTHO05D008300 1.0e-08 64.3 214 32.7
TWI38G2247 Tripterygium wilfordii HOM05D000716 ORTHO05D008300 1.0e-08 64.3 175 37.7
Psat5g217360 Pisum sativum HOM05D000716 ORTHO05D008300 1.3e-08 63.9 214 33.6
TPR.G3874 Trifolium pratense HOM05D000716 ORTHO05D008300 1.3e-08 63.9 184 34.2
VMungo1080G1793 Vigna mungo HOM05D000716 ORTHO05D008300 1.3e-08 63.9 189 33.9
Lj3g0003771 Lotus japonicus HOM05D000716 ORTHO05D008300 1.8e-08 63.5 169 36.7
MD07G1034100 Malus domestica HOM05D000716 ORTHO05D008300 1.8e-08 63.5 171 35.7
TWI63G0606 Tripterygium wilfordii HOM05D000716 ORTHO05D008300 1.8e-08 63.5 193 34.7
PGR031G0769 Punica granatum HOM05D000716 ORTHO05D008300 3.0e-08 62.8 171 35.1
Sed0026818 Sechium edule HOM05D000716 ORTHO05D008300 3.0e-08 62.8 171 33.3
Actinidia19449 Actinidia chinensis HOM05D000716 ORTHO05D008300 3.9e-08 62.4 170 37.1
ClCG05G020740 Citrullus lanatus HOM05D000716 ORTHO05D008300 3.9e-08 62.4 180 32.8
CsaV3_5G014750 Cucumis sativus L. HOM05D000716 ORTHO05D008300 3.9e-08 62.4 180 32.2
QL04p014065 Quercus lobata HOM05D000716 ORTHO05D008300 3.9e-08 62.4 166 34.9
Potri.001G024600 Populus trichocarpa HOM05D000716 ORTHO05D008300 5.1e-08 62.0 170 35.3
Dinv01120 Davidia involucrata HOM05D000716 ORTHO05D008300 6.7e-08 61.6 78 56.4
Dinv09250 Davidia involucrata HOM05D000716 ORTHO05D008300 6.7e-08 61.6 78 56.4
RcHm_v2.0_Chr1g0321131 Rosa chinensis HOM05D000716 ORTHO05D008300 6.7e-08 61.6 184 34.8
Lalb_Chr25g0282321 Lupinus albus HOM05D000716 ORTHO05D008300 8.7e-08 61.2 177 36.2
MELO3C015024.2 Cucumis melo HOM05D000716 ORTHO05D008300 1.1e-07 60.8 180 32.2
Glyma.11G114500 Glycine max HOM05D000716 ORTHO05D008300 1.1e-07 60.8 184 33.2
FvH4_7g02490 Fragaria vesca HOM05D000716 ORTHO05D008300 1.5e-07 60.5 184 34.2
FAN06G4889 Fragaria x ananassa HOM05D000716 ORTHO05D008300 1.5e-07 60.5 184 34.2
MD02G1293000 Malus domestica HOM05D000716 ORTHO05D008300 1.5e-07 60.5 184 34.2
FAN03G0513 Fragaria x ananassa HOM05D000716 ORTHO05D008300 1.9e-07 60.1 184 33.7
Sabra01G0018300 Salix brachista HOM05D000716 ORTHO05D008300 1.9e-07 60.1 185 35.7
Sabra03G0148600 Salix brachista HOM05D000716 ORTHO05D008300 1.9e-07 60.1 184 34.2
Haze_03059 Corylus avellana HOM05D000321 ORTHO05D008300 2.5e-07 59.7 159 35.8
Potri.003G201000 Populus trichocarpa HOM05D000716 ORTHO05D008300 2.5e-07 59.7 182 34.1
PGSC0003DMG400015107 Solanum tuberosum HOM05D000461 ORTHO05D020834 3.3e-07 59.3 48 64.6
Aqoxy1G00338 Aquilegia oxysepala HOM05D000716 ORTHO05D008300 4.3e-07 58.9 74 55.4
Cpa.g.sc197.3 Carica papaya HOM05D000716 ORTHO05D008300 4.3e-07 58.9 184 31.5
CiPaw.13G011200 Carya illinoinensis HOM05D000716 ORTHO05D008300 4.3e-07 58.9 166 34.3
CSS0010368 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D008300 5.7e-07 58.5 75 56.0
Cc02_g30350 Coffea canephora HOM05D000716 ORTHO05D008300 7.4e-07 58.2 169 34.3
Glyma.04G140066 Glycine max HOM05D000716 ORTHO05D008300 7.4e-07 58.2 178 34.3
Rhsim07G0063200 Rhododendron simsii HOM05D000716 ORTHO05D008300 7.4e-07 58.2 184 33.2
Eucgr.G03250 Eucalyptus grandis HOM05D000716 ORTHO05D008300 9.7e-07 57.8 184 34.8
Dinv32042 Davidia involucrata HOM05D000716 ORTHO05D008300 1.3e-06 57.4 75 53.3
MSTRG.5059 Avicennia marina HOM05D000716 ORTHO05D008300 1.6e-06 57.0 165 33.9
Oeu056564.1 Olea europaea HOM05D000716 ORTHO05D008300 1.6e-06 57.0 170 35.3
Manes.04G164900 Manihot esculenta HOM05D000716 ORTHO05D008300 2.2e-06 56.6 167 35.3
Os01g0948500 Oryza sativa ssp. japonica HOM05D000716 ORTHO05D008300 4.8e-06 55.5 183 31.7
Atru.chr11.2438 Acer truncatum HOM05D000716 ORTHO05D008300 6.3e-06 55.1 197 32.5


User provided reference genes

Program Settings