Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g044565.1 Solanum lycopersicum HOM05D000359 ORTHO05D028371 3.9e-108 394.8 199 100.0
PGSC0003DMG400015109 Solanum tuberosum HOM05D000359 ORTHO05D000251 1.2e-27 127.5 141 58.9
Sopen10g013170 Solanum pennellii HOM05D000359 ORTHO05D028371 1.8e-25 120.2 71 90.1
Solyc10g006540.4 Solanum lycopersicum HOM05D000359 ORTHO05D000251 8.6e-15 84.7 66 72.7
PGSC0003DMG400014403 Solanum tuberosum HOM05D000359 ORTHO05D028371 5.6e-14 82.0 66 71.2
Sopen10g002490 Solanum pennellii HOM05D000359 ORTHO05D000251 1.8e-12 77.0 66 66.7
Peaxi162Scf00257g00111 Petunia axillaris HOM05D000359 ORTHO05D000251 9.2e-09 64.7 67 56.7
DCAR_012962 Daucus carota HOM05D000359 ORTHO05D000251 3.9e-07 59.3 41 73.2
ECA240G1600 Erigeron canadensis HOM05D000359 ORTHO05D000251 5.0e-07 58.9 38 78.9
Lsat_1_v5_gn_0_7001 Lactuca sativa HOM05D000359 ORTHO05D000251 6.6e-07 58.5 38 78.9
Nitab4.5_0000397g0130 Nicotiana tabacum HOM05D000359 ORTHO05D000251 6.6e-07 58.5 39 74.4
Nitab4.5_0002229g0120 Nicotiana tabacum HOM05D000359 ORTHO05D000251 1.5e-06 57.4 38 76.3
Nitab4.5_0002342g0130 Nicotiana tabacum HOM05D000359 ORTHO05D000251 1.5e-06 57.4 38 76.3
Cc05_g13140 Coffea canephora HOM05D000359 ORTHO05D000251 1.9e-06 57.0 38 73.7
Nitab4.5_0002238g0040 Nicotiana tabacum HOM05D000359 ORTHO05D000251 2.5e-06 56.6 39 71.8
PGSC0003DMG400012102 Solanum tuberosum HOM05D000359 ORTHO05D000251 2.5e-06 56.6 122 40.2
Peaxi162Scf01086g00029 Petunia axillaris HOM05D000359 ORTHO05D000251 3.3e-06 56.2 39 71.8
DCAR_000397 Daucus carota HOM05D000359 ORTHO05D000251 4.3e-06 55.8 47 63.8
Medtr4g081410 Medicago truncatula HOM05D000359 ORTHO05D000251 4.3e-06 55.8 38 73.7
Sc06g0009380 Simmondsia chinensis HOM05D000359 ORTHO05D000251 4.3e-06 55.8 43 62.8
PGSC0003DMG400019229 Solanum tuberosum HOM05D000359 ORTHO05D000251 4.3e-06 55.8 39 69.2
SGA_v2.0_scaffold49G18324 Striga asiatica HOM05D000359 ORTHO05D000251 4.3e-06 55.8 38 73.7
HanXRQChr08g0233901 Helianthus annuus HOM05D000359 ORTHO05D000251 5.6e-06 55.5 39 71.8
Solyc07g064010.3 Solanum lycopersicum HOM05D000359 ORTHO05D000251 5.6e-06 55.5 39 69.2
Sopen07g032150 Solanum pennellii HOM05D000359 ORTHO05D000251 5.6e-06 55.5 39 69.2
MSTRG.14158 Avicennia marina HOM05D000359 ORTHO05D000251 7.3e-06 55.1 43 65.1
MSTRG.14409 Avicennia marina HOM05D000359 ORTHO05D000251 7.3e-06 55.1 38 71.1
PGR083G1534 Punica granatum HOM05D000359 ORTHO05D000251 9.5e-06 54.7 38 71.1


User provided reference genes

Program Settings