Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 4.3e-110 401.4 207 100.0
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 5.3e-108 394.4 207 98.6
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 1.8e-84 316.2 206 80.1
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 4.5e-75 285.0 196 76.5
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.6e-72 276.6 156 90.4
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.1e-72 276.2 201 71.1
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 3.3e-70 268.9 196 73.0
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 5.7e-70 268.1 199 70.9
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 5.7e-70 268.1 174 79.3
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 7.4e-70 267.7 198 71.2
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 7.4e-70 267.7 156 87.8
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 7.4e-70 267.7 204 68.1
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 2.8e-69 265.8 198 70.7
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 2.8e-69 265.8 198 70.7
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 6.3e-69 264.6 197 70.1
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 2.4e-68 262.7 181 73.5
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 3.1e-68 262.3 199 69.8
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 3.1e-68 262.3 198 70.7
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 9.1e-68 260.8 200 68.5
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 9.1e-68 260.8 204 68.6
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 1.6e-67 260.0 203 71.4
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 1.6e-67 260.0 186 71.5
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.6e-67 260.0 195 69.2
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.6e-67 260.0 197 69.5
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.5e-67 258.5 195 69.2
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 7.7e-67 257.7 197 70.6
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 7.7e-67 257.7 199 70.4
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 1.0e-66 257.3 195 69.2
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.3e-66 256.9 216 62.0
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.7e-66 256.5 195 68.7
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 2.9e-66 255.8 166 78.3
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 6.5e-66 254.6 199 67.8
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.1e-65 253.8 195 68.7
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.5e-65 253.4 195 67.7
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 1.5e-65 253.4 181 71.3
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.9e-65 253.1 178 73.6
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.9e-65 253.1 181 72.4
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 2.5e-65 252.7 174 72.4
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 2.5e-65 252.7 199 69.3
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 9.4e-65 250.8 195 66.7
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 9.4e-65 250.8 184 69.0
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.2e-64 250.4 202 65.3
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 1.6e-64 250.0 199 65.3
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 2.7e-64 249.2 202 64.9
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 4.7e-64 248.4 171 72.5
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 2.3e-63 246.1 208 65.9
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 3.0e-63 245.7 209 62.7
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 5.2e-63 245.0 205 63.4
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 8.8e-63 244.2 189 67.2
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 1.2e-62 243.8 209 65.1
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 1.5e-62 243.4 203 62.6
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 2.0e-62 243.0 196 67.3
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 2.0e-62 243.0 200 65.0
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 7.5e-62 241.1 178 67.4
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 1.3e-61 240.4 174 69.5
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 2.2e-61 239.6 184 64.7
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 2.8e-61 239.2 168 74.4
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 3.7e-61 238.8 176 67.6
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 3.7e-61 238.8 206 60.2
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 3.7e-61 238.8 180 66.7
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 3.7e-61 238.8 180 66.7
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 3.7e-61 238.8 195 63.1
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 3.7e-61 238.8 186 69.9
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 4.8e-61 238.4 198 65.7
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 6.3e-61 238.0 177 68.4
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 6.3e-61 238.0 155 78.1
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 8.2e-61 237.7 180 66.7
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 1.1e-60 237.3 180 65.6
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 1.4e-60 236.9 187 66.3
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 2.4e-60 236.1 176 67.0
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 2.4e-60 236.1 258 53.5
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 2.4e-60 236.1 187 65.2
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 3.1e-60 235.7 205 61.5
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.7e-59 232.6 211 59.7
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 3.5e-59 232.3 178 65.2
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 5.9e-59 231.5 170 70.0
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 5.9e-59 231.5 150 77.3
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.7e-58 229.9 156 76.3
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.9e-58 229.2 156 76.3
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 5.0e-58 228.4 206 62.6
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 8.5e-58 227.6 206 63.6
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.5e-57 226.9 153 76.5
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 5.5e-57 224.9 191 62.8
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 2.7e-56 222.6 176 64.8
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 2.7e-56 222.6 183 62.8
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 1.8e-55 219.9 201 59.2
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.5e-54 216.9 154 73.4
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.7e-53 213.4 211 57.3
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 4.8e-53 211.8 196 58.2
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 9.1e-52 207.6 150 73.3
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.7e-51 206.1 146 73.3
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 7.7e-51 204.5 148 69.6
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 3.8e-50 202.2 205 54.1
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.0e-47 194.1 163 61.3
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.0e-46 189.9 204 53.4
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 2.6e-46 189.5 155 61.3
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.4e-46 189.1 148 66.2
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 9.2e-44 181.0 183 55.2
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.5e-43 179.1 160 59.4
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 4.3e-41 172.2 119 74.8
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 2.0e-35 153.3 175 52.6
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 3.3e-33 146.0 199 41.7
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.4e-31 140.6 143 60.1
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.4e-31 140.6 180 45.6
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 1.8e-31 140.2 87 77.0
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 4.0e-31 139.0 174 45.4
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.2e-27 127.5 81 76.5
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 3.5e-27 125.9 79 77.2
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.6e-27 125.6 118 62.7
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 7.8e-27 124.8 171 43.9
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 6.8e-23 111.7 94 62.8
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.1e-20 104.4 72 72.2
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 7.1e-20 101.7 235 31.9
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 2.5e-17 93.2 65 67.7
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 3.6e-16 89.4 61 75.4
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.8e-15 87.0 82 61.0
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 5.8e-14 82.0 74 64.9
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.1e-11 73.6 99 49.5
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 7.8e-11 71.6 100 41.0
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 1.0e-10 71.2 65 58.5
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 3.0e-10 69.7 76 44.7
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 4.0e-07 59.3 98 37.8
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.0e-06 57.0 101 45.5
CAN.G1180.5 Capsicum annuum HOM05D023338 ORTHO05D028486 4.4e-06 55.8 94 46.8


User provided reference genes

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