Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g039193.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 7.7e-70 266.9 125 100.0
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 2.2e-64 248.8 125 92.0
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 4.5e-54 214.5 124 80.6
Sopen06g014270 Solanum pennellii HOM05D000107 ORTHO05D014265 3.8e-45 184.9 111 78.4
Solyc05g150110.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 3.4e-41 171.8 99 80.8
Solyc02g081087.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 7.5e-41 170.6 102 79.4
Solyc08g065765.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 2.3e-34 149.1 107 64.5
PGSC0003DMG400042404 Solanum tuberosum HOM05D000107 ORTHO05D014265 9.2e-23 110.5 78 69.2
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 5.6e-20 101.3 56 80.4
AUR62040123 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.9e-16 89.0 118 33.9
AUR62024349 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-15 86.7 128 35.9
Sopen02g004240 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-15 86.7 70 61.4
AUR62036640 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.4e-15 84.7 128 34.4
AUR62037118 Chenopodium quinoa HOM05D010065 ORTHO05D000385 5.4e-15 84.7 124 39.5
Solyc05g040065.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 5.4e-15 84.7 48 79.2
AUR62040356 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.0e-15 84.3 128 35.2
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 7.0e-15 84.3 124 38.7
AUR62018241 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.2e-15 84.0 95 42.1
AUR62042815 Chenopodium quinoa HOM05D000107 ORTHO05D016691 1.2e-14 83.6 117 40.2
AUR62043742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-14 82.8 128 34.4
AUR62031350 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.0e-13 80.5 128 33.6
AUR62030809 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-13 79.7 117 39.3
AUR62042513 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.0e-13 79.0 127 34.6
Solyc05g150139.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.0e-13 79.0 51 70.6
AUR62022417 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.9e-13 78.6 128 33.6
AUR62004862 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.6e-13 77.8 128 33.6
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.6e-13 77.8 129 29.5
AUR62033022 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.5e-12 76.6 128 32.8
AUR62033024 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.5e-12 76.6 128 32.8
AUR62034026 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-12 76.3 128 32.8
Ah.01g009330 Amaranthus hybridus HOM05D000107 ORTHO05D000062 2.5e-12 75.9 122 34.4
AUR62014956 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-12 75.9 128 33.6
Ah.13g065570 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.2e-11 73.6 114 34.2
Ah.01g011060 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.6e-11 73.2 114 34.2
Ah.04g158600 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.6e-11 73.2 114 34.2
AUR62038387 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-11 73.2 129 30.2
AUR62040733 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-11 73.2 120 30.0
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 2.8e-11 72.4 36 88.9
Sopen09g017230 Solanum pennellii HOM05D000107 ORTHO05D014265 3.6e-11 72.0 79 48.1
AUR62039806 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.7e-11 71.6 127 33.1
AUR62027609 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-10 70.5 122 33.6
AUR62038913 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-10 70.1 99 33.3
AUR62035729 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-09 66.2 104 35.6
PGSC0003DMG400043689 Solanum tuberosum HOM05D000107 ORTHO05D014265 2.0e-09 66.2 48 60.4
AUR62038390 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.9e-09 63.9 110 29.1
EL10Ac4g08613 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-08 62.8 80 36.2
AUR62043993 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-08 62.8 101 35.6
SGA_v2.0_scaffold174G39225 Striga asiatica HOM05D000107 ORTHO05D000062 3.7e-08 62.0 104 28.8
Ca_02957_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.9e-08 61.6 123 29.3
AUR62034741 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.3e-08 60.8 113 36.3
AUR62042259 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.3e-08 60.8 101 33.7
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.1e-07 60.5 101 33.7
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-07 59.7 102 35.3
AUR62013915 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-07 59.7 101 34.7
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 2.4e-07 59.3 108 26.9
AUR62025845 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.2e-07 58.9 109 29.4
AUR62041975 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.1e-07 58.5 101 33.7
AUR62043995 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.1e-07 58.5 102 33.3
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.4e-07 58.2 101 34.7
AUR62029024 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.4e-07 58.2 80 42.5
AUR62029632 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.2e-07 57.4 96 35.4
AUR62030154 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-06 56.6 72 37.5
AUR62030816 Chenopodium quinoa HOM05D010065 ORTHO05D016691 2.1e-06 56.2 83 41.0
AUR62034994 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-06 56.2 101 33.7
TWI31G1320 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.5e-06 55.5 108 27.8
AUR62005778 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.6e-06 55.1 93 36.6
AUR62026240 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.6e-06 55.1 101 32.7
AUR62026707 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.0e-06 54.7 100 32.0


User provided reference genes

Program Settings