Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 3.0e-55 218.4 119 100.0
Solyc07g032130.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 7.4e-30 134.0 107 72.0
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 6.5e-26 120.9 113 65.5
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-25 119.8 118 57.6
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-24 115.2 114 59.6
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-23 113.2 114 57.0
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-22 109.4 111 55.9
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-22 107.5 114 54.4
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-21 104.8 115 54.8
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-20 102.8 114 52.6
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-20 102.1 110 55.5
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-20 101.3 113 53.1
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-20 100.9 114 53.5
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 9.0e-20 100.5 108 53.7
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-19 100.1 108 51.9
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-19 100.1 114 52.6
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-19 99.4 101 61.4
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 2.6e-19 99.0 111 52.3
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-19 99.0 115 51.3
Solyc01g058120.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.7e-18 96.3 80 67.5
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-18 94.4 114 51.8
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 3.2e-17 92.0 115 49.6
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-17 92.0 114 50.0
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-17 92.0 114 50.0
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-17 92.0 114 53.5
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 9.4e-17 90.5 101 52.5
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-17 90.5 114 50.9
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 1.6e-16 89.7 118 47.5
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 2.7e-16 89.0 108 50.0
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 2.7e-16 89.0 108 50.0
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-16 89.0 115 47.8
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-16 88.6 95 57.9
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-16 88.2 114 48.2
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 7.9e-16 87.4 118 44.9
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 7.9e-16 87.4 115 44.3
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.9e-16 87.4 114 48.2
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-15 87.0 114 48.2
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-15 87.0 111 49.5
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-15 86.7 108 49.1
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-15 86.3 115 46.1
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-15 85.5 88 58.0
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-15 84.3 114 46.5
CAN.G1050.1 Capsicum annuum HOM05D003911 ORTHO05D002175 1.1e-14 83.6 90 53.3
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 1.5e-14 83.2 104 50.0
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-14 82.8 100 49.0
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-14 82.4 114 47.4
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-13 79.7 81 56.8
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 3.7e-13 78.6 83 51.8
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-13 77.8 81 58.0
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-12 74.7 78 53.8
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-12 73.9 91 48.4
Nitab4.5_0000238g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-11 72.8 83 53.0
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-11 72.8 114 43.9
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-11 72.4 114 42.1
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-11 72.4 114 43.0
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-11 72.0 115 43.5
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-11 71.6 81 48.1
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-11 71.6 114 43.9
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 7.7e-11 70.9 92 50.0
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-10 69.3 82 56.1
Nitab4.5_0005978g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-10 68.9 74 52.7
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-10 68.6 106 42.5
Nitab4.5_0004888g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-10 67.8 79 49.4
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-09 65.9 114 40.4
CAN.G148.6 Capsicum annuum HOM05D003911 ORTHO05D001773 3.2e-09 65.5 80 47.5
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-09 65.5 91 45.1
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-09 65.1 114 40.4
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-09 64.3 111 41.4
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-09 64.3 114 40.4
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-09 63.9 82 50.0
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-09 63.9 70 51.4
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-09 63.9 114 37.7
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-08 63.2 115 41.7
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-08 62.8 63 54.0
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-08 62.0 114 39.5
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 4.7e-08 61.6 70 52.9
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-07 60.5 114 36.8
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 1.4e-07 60.1 72 45.8
CAN.G218.4 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-07 60.1 64 50.0
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-07 60.1 114 38.6
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 59.7 61 57.4
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 59.7 101 44.6
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-07 57.4 117 35.9
CAN.G1130.7 Capsicum annuum HOM05D000995 ORTHO05D001773 2.6e-06 55.8 76 46.1
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-06 55.8 60 50.0
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 9.7e-06 53.9 64 48.4
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-06 53.9 58 53.4
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-06 53.9 120 37.5


User provided reference genes

Program Settings