Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 6.9e-187 657.1 326 100.0
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 8.4e-169 597.0 302 98.3
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 2.0e-149 532.7 310 88.1
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 1.3e-129 466.8 311 78.5
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.0e-117 426.4 313 74.4
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 3.5e-106 389.0 310 68.4
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.0e-89 334.3 328 57.0
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.4e-86 323.9 333 55.9
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 6.8e-86 321.6 336 53.3
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 5.8e-85 318.5 307 56.4
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 8.4e-84 314.7 343 53.4
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 4.1e-83 312.4 321 56.1
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 1.3e-81 307.4 312 53.5
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 1.7e-81 307.0 304 56.2
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 8.7e-81 304.7 329 52.9
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 9.6e-80 301.2 318 53.8
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 1.6e-79 300.4 315 54.0
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 2.1e-79 300.1 246 63.8
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.1e-78 297.7 328 51.8
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 6.9e-78 295.0 322 53.4
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 1.2e-77 294.3 256 62.9
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.5e-77 293.9 250 61.2
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 4.4e-77 292.4 316 53.8
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 4.4e-77 292.4 239 61.9
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 9.9e-77 291.2 317 50.5
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.3e-76 290.8 249 59.8
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 2.2e-76 290.0 311 53.7
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.9e-76 289.7 315 53.0
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 3.8e-76 289.3 277 58.8
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 3.8e-76 289.3 257 61.1
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 4.9e-76 288.9 311 52.4
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 6.4e-76 288.5 242 61.6
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 6.4e-76 288.5 250 62.4
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 8.4e-76 288.1 242 61.6
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 8.4e-76 288.1 259 61.0
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 8.4e-76 288.1 249 62.2
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 1.1e-75 287.7 300 54.0
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.9e-75 287.0 247 58.3
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 4.2e-75 285.8 247 59.9
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 7.1e-75 285.0 256 58.6
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 7.1e-75 285.0 319 52.4
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 1.2e-74 284.3 313 52.4
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 1.6e-74 283.9 317 53.0
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 1.6e-74 283.9 251 60.2
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 2.1e-74 283.5 290 52.8
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 7.8e-74 281.6 326 51.8
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 1.3e-73 280.8 251 59.0
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 2.3e-73 280.0 252 58.3
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 2.3e-73 280.0 291 54.0
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 3.9e-73 279.3 253 58.9
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 8.7e-73 278.1 248 57.7
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 1.1e-72 277.7 285 54.0
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.5e-72 277.3 314 50.6
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.5e-72 277.3 252 58.7
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 2.5e-72 276.6 267 59.2
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 3.3e-72 276.2 299 52.2
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 7.3e-72 275.0 313 51.8
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 7.3e-72 275.0 321 50.5
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 9.6e-72 274.6 256 57.4
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.3e-71 274.2 313 52.1
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 2.1e-71 273.5 255 56.1
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 4.8e-71 272.3 320 51.9
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 4.8e-71 272.3 322 51.6
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 1.4e-70 270.8 319 51.1
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.8e-70 270.4 283 53.0
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 2.4e-70 270.0 246 55.7
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.1e-70 269.6 290 52.4
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 9.0e-70 268.1 290 52.4
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 9.0e-70 268.1 288 52.1
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 1.5e-69 267.3 254 59.4
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.5e-69 267.3 252 56.7
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 4.5e-69 265.8 248 60.5
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 4.5e-69 265.8 254 59.4
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 5.8e-69 265.4 225 62.7
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.8e-69 265.4 252 56.0
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.8e-69 265.4 252 56.0
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 7.6e-69 265.0 318 48.7
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.4e-67 260.8 191 68.1
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 2.4e-67 260.0 257 55.3
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 2.4e-67 260.0 238 60.1
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 1.2e-66 257.7 276 52.9
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 2.1e-66 256.9 286 54.2
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 2.7e-66 256.5 347 46.1
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 4.6e-66 255.8 248 58.1
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 4.6e-66 255.8 248 58.1
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.0e-66 255.4 222 60.4
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 8.7e-65 251.5 194 65.5
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.5e-64 250.8 192 64.1
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 7.4e-64 248.4 261 52.5
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 1.3e-63 247.7 319 48.0
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.3e-63 247.7 340 45.0
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 1.6e-63 247.3 306 46.4
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 4.0e-62 242.7 263 51.0
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 1.5e-61 240.7 309 46.0
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 5.8e-61 238.8 147 77.6
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 2.9e-60 236.5 238 52.1
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 1.2e-58 231.1 208 58.7
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.7e-57 225.3 177 63.3
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 8.7e-57 224.9 244 53.3
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 3.4e-53 213.0 226 53.5
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 6.3e-47 192.2 198 54.0
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 9.1e-38 161.8 179 46.4
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 3.4e-37 159.8 137 62.8
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 5.9e-29 132.5 110 59.1
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 5.7e-24 115.9 65 81.5
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 5.7e-24 115.9 99 54.5
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.1e-22 111.7 288 29.5
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 7.2e-19 99.0 87 69.0
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 2.1e-18 97.4 287 27.2
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 2.7e-18 97.1 287 27.2
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 2.6e-16 90.5 174 35.6
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 5.7e-16 89.4 47 85.1
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 2.4e-14 84.0 78 61.5
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 4.5e-13 79.7 200 30.5
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 2.7e-10 70.5 129 33.3
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 3.6e-10 70.1 76 51.3
Lsat_1_v5_gn_7_20540 Lactuca sativa HOM05D003720 ORTHO05D007744 4.1e-06 56.6 31 77.4


User provided reference genes

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