Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 6.1e-97 357.5 176 100.0
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 8.8e-72 273.9 139 97.8
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 6.8e-64 247.7 139 87.1
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.0e-59 233.8 136 83.1
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.7e-59 233.0 136 83.8
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 1.6e-49 199.9 139 68.3
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 4.7e-49 198.4 139 66.9
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.7e-49 198.4 139 66.2
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 6.2e-49 198.0 139 65.5
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 8.0e-49 197.6 135 68.9
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.1e-48 197.2 139 64.7
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 3.1e-48 195.7 139 67.6
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 5.2e-48 194.9 180 58.9
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 6.8e-48 194.5 135 65.9
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 1.2e-47 193.7 135 65.2
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 2.0e-47 193.0 137 63.5
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 3.4e-47 192.2 146 63.0
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 5.8e-47 191.4 138 64.5
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 7.5e-47 191.0 139 65.5
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 7.5e-47 191.0 139 65.5
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.3e-46 190.3 139 64.7
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 1.3e-46 190.3 134 63.4
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.2e-46 189.5 142 63.4
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 6.4e-46 188.0 138 60.9
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 8.3e-46 187.6 128 65.6
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.1e-45 187.2 136 63.2
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.4e-45 186.8 139 63.3
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.9e-45 186.4 136 63.2
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.9e-45 186.4 136 62.5
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 4.1e-45 185.3 139 61.2
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 5.4e-45 184.9 136 61.8
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 5.4e-45 184.9 136 61.0
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 9.2e-45 184.1 136 61.8
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.6e-44 183.3 128 68.0
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 2.7e-44 182.6 139 61.2
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 7.8e-44 181.0 139 60.4
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 1.3e-43 180.3 132 63.6
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 1.3e-43 180.3 138 58.7
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.7e-43 179.9 136 61.0
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.3e-43 179.5 136 58.1
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 2.3e-43 179.5 139 59.0
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 3.0e-43 179.1 134 61.9
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 3.0e-43 179.1 126 64.3
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 3.9e-43 178.7 139 59.7
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 3.9e-43 178.7 137 63.5
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 6.6e-43 177.9 139 59.0
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 6.6e-43 177.9 140 59.3
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 8.6e-43 177.6 139 58.3
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 8.6e-43 177.6 137 62.8
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 8.6e-43 177.6 128 62.5
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.1e-42 177.2 126 65.1
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.1e-42 177.2 139 59.0
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 1.5e-42 176.8 137 60.6
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.5e-42 176.8 134 61.2
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 3.3e-42 175.6 139 57.6
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 4.3e-42 175.3 139 59.7
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 4.3e-42 175.3 135 59.3
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.3e-42 175.3 134 61.2
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 5.6e-42 174.9 126 63.5
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 7.3e-42 174.5 136 61.0
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.6e-41 173.3 137 61.3
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.6e-41 173.3 138 56.5
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 6.2e-41 171.4 111 70.3
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 8.1e-41 171.0 127 59.8
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.8e-40 169.9 156 54.5
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 2.3e-40 169.5 139 61.2
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.0e-40 168.7 124 60.5
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 4.0e-40 168.7 139 55.4
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 5.2e-40 168.3 138 56.5
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 2.6e-39 166.0 116 66.4
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 3.4e-39 165.6 139 54.0
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 4.4e-39 165.2 128 58.6
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 7.5e-39 164.5 139 54.0
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 9.9e-39 164.1 139 54.0
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 9.9e-39 164.1 128 59.4
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 9.9e-39 164.1 137 55.5
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 9.9e-39 164.1 130 57.7
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 2.9e-38 162.5 140 53.6
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 2.9e-38 162.5 130 57.7
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 4.9e-38 161.8 139 52.5
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 6.4e-38 161.4 139 53.2
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 6.4e-38 161.4 139 53.2
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 6.4e-38 161.4 128 59.4
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.1e-37 160.6 139 52.5
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 3.2e-37 159.1 136 53.7
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 3.2e-37 159.1 128 59.4
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 3.2e-37 159.1 125 57.6
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 3.2e-37 159.1 142 53.5
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 5.4e-37 158.3 130 54.6
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 7.1e-37 157.9 139 55.4
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 7.1e-37 157.9 139 51.1
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 2.1e-36 156.4 139 52.5
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 2.7e-36 156.0 139 51.1
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 3.5e-36 155.6 128 57.8
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 4.6e-36 155.2 139 54.0
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 1.0e-35 154.1 128 56.2
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.9e-34 149.8 139 51.8
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 3.3e-34 149.1 137 50.4
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 1.2e-33 147.1 128 54.7
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 4.3e-26 122.1 97 57.7
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.2e-25 120.6 135 45.9
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 9.9e-23 110.9 94 54.3
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.3e-22 110.5 75 66.7
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 4.9e-22 108.6 70 68.6
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 2.4e-21 106.3 127 38.6
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 6.6e-19 98.2 109 41.3
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 1.1e-18 97.4 128 33.6
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 5.6e-18 95.1 128 33.6
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 5.6e-18 95.1 129 34.9
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 2.8e-17 92.8 126 36.5
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 8.7e-11 71.2 54 61.1
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.3e-09 67.4 118 33.9
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 5.3e-08 62.0 86 43.0
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 6.4e-06 55.1 43 51.2
Nitab4.5_0000187g0300 Nicotiana tabacum HOM05D006862 ORTHO05D284191 6.4e-06 55.1 93 39.8


User provided reference genes

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