Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g018690.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.0e-44 183.0 86 100.0
PGSC0003DMG400040415 Solanum tuberosum HOM05D003253 ORTHO05D002078 8.8e-25 116.7 83 66.3
Sopen06g019350 Solanum pennellii HOM05D003253 ORTHO05D002078 8.3e-23 110.2 83 63.9
PGSC0003DMG400030174 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.4e-22 109.4 81 61.7
Solyc06g054230.4 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.8e-22 109.0 83 62.7
PGSC0003DMG400023100 Solanum tuberosum HOM05D003253 ORTHO05D002078 7.0e-22 107.1 83 57.8
Sopen06g019340 Solanum pennellii HOM05D003253 ORTHO05D002078 1.6e-21 105.9 83 60.2
Solyc06g054210.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.0e-21 105.5 83 59.0
Sopen09g024540 Solanum pennellii HOM05D003253 ORTHO05D002078 3.5e-21 104.8 83 60.2
Solyc06g054170.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 5.9e-21 104.0 83 59.0
Solyc06g054190.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.2e-20 102.1 83 57.8
Sopen06g019310 Solanum pennellii HOM05D003253 ORTHO05D002078 2.2e-20 102.1 83 57.8
Solyc09g059740.3 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.1e-19 99.8 84 53.6
Solyc09g061360.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 5.5e-19 97.4 83 56.6
Nitab4.5_0000321g0110 Nicotiana tabacum HOM05D003253 ORTHO05D002078 1.2e-18 96.3 79 59.5
Solyc09g059860.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.1e-18 95.5 77 58.4
Solyc09g061490.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.8e-17 92.4 82 56.1
Nitab4.5_0008118g0010 Nicotiana tabacum HOM05D003253 ORTHO05D002078 3.0e-17 91.7 79 57.0
Peaxi162Scf00192g00112 Petunia axillaris HOM05D003253 ORTHO05D002078 3.0e-17 91.7 79 54.4
CAN.G231.1 Capsicum annuum HOM05D003253 ORTHO05D002078 1.2e-16 89.7 75 56.0
Sopen09g023580 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-16 88.6 71 56.3
Nitab4.5_0002666g0010 Nicotiana tabacum HOM05D003253 ORTHO05D002078 1.7e-12 75.9 64 56.2
Sopen09g023480 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-11 70.9 61 59.0
PGSC0003DMG400030176 Solanum tuberosum HOM05D003253 ORTHO05D002078 9.5e-11 70.1 57 57.9
CSS0030672 Camellia sinensis var. sinensis HOM05D003253 ORTHO05D002078 1.2e-10 69.7 68 48.5
CSS0040917 Camellia sinensis var. sinensis HOM05D003253 ORTHO05D002078 1.2e-10 69.7 68 48.5
DCAR_002383 Daucus carota HOM05D003253 ORTHO05D002078 1.2e-10 69.7 71 46.5
PGSC0003DMG400030175 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.2e-10 69.7 61 55.7
vmacro09558 Vaccinium macrocarpon HOM05D003253 ORTHO05D002078 2.3e-09 65.5 71 42.3
GSVIVG01017993001 Vitis vinifera HOM05D003253 ORTHO05D002078 2.3e-09 65.5 65 46.2
DCAR_030641 Daucus carota HOM05D003253 ORTHO05D002078 3.0e-09 65.1 66 48.5
PGSC0003DMG400039774 Solanum tuberosum HOM05D003253 ORTHO05D002078 4.0e-09 64.7 52 57.7
vmacro09557 Vaccinium macrocarpon HOM05D003253 ORTHO05D002078 6.8e-09 63.9 71 42.3
Nitab4.5_0001342g0030 Nicotiana tabacum HOM05D003253 ORTHO05D002078 2.0e-08 62.4 64 45.3
PGSC0003DMG400032262 Solanum tuberosum HOM05D003253 ORTHO05D002078 2.0e-08 62.4 64 45.3
GSVIVG01017991001 Vitis vinifera HOM05D003253 ORTHO05D002078 2.0e-08 62.4 79 44.3
AUR62008677 Chenopodium quinoa HOM05D003253 ORTHO05D002078 2.6e-08 62.0 66 45.5
AUR62025569 Chenopodium quinoa HOM05D003253 ORTHO05D002078 2.6e-08 62.0 66 45.5
EL10Ac7g17523 Beta vulgaris HOM05D003253 ORTHO05D002078 3.4e-08 61.6 66 45.5
Nitab4.5_0001920g0010 Nicotiana tabacum HOM05D003253 ORTHO05D002078 3.4e-08 61.6 64 45.3
PGSC0003DMG400041970 Solanum tuberosum HOM05D003253 ORTHO05D002078 3.4e-08 61.6 51 56.9
Aqoxy2G03403 Aquilegia oxysepala HOM05D003253 ORTHO05D002078 5.7e-08 60.8 66 40.9
CAN.G1094.7 Capsicum annuum HOM05D003253 ORTHO05D002078 5.7e-08 60.8 64 45.3
Oeu049061.1 Olea europaea HOM05D003253 ORTHO05D002078 5.7e-08 60.8 66 42.4
SalBow3G1993 Salvia bowleyana HOM05D003253 ORTHO05D002078 5.7e-08 60.8 60 45.0
MSTRG.24737 Avicennia marina HOM05D003253 ORTHO05D002078 7.5e-08 60.5 54 50.0
Eucgr.H03454 Eucalyptus grandis HOM05D003253 ORTHO05D002078 7.5e-08 60.5 64 46.9
Aqoxy5G00455 Aquilegia oxysepala HOM05D003253 ORTHO05D002078 9.8e-08 60.1 69 42.0
Eucgr.H03453 Eucalyptus grandis HOM05D003253 ORTHO05D002078 9.8e-08 60.1 51 52.9
Solyc09g082140.4 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.3e-07 59.7 64 43.8
SGA_v2.0_scaffold522G52706 Striga asiatica HOM05D003253 ORTHO05D002078 1.3e-07 59.7 55 49.1
Cpa.g.sc1512.1 Carica papaya HOM05D003253 ORTHO05D002078 1.7e-07 59.3 63 47.6
Migut.N00190 Erythranthe guttata HOM05D003253 ORTHO05D002078 1.7e-07 59.3 52 50.0
Sopen09g031020 Solanum pennellii HOM05D003253 ORTHO05D002078 1.7e-07 59.3 64 43.8
Hund12120 Selenicereus undatus HOM05D003253 ORTHO05D002078 2.2e-07 58.9 66 43.9
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 2.2e-07 58.9 55 50.9
DCAR_027222 Daucus carota HOM05D003253 ORTHO05D002078 2.8e-07 58.5 62 45.2
Peaxi162Scf00092g00617 Petunia axillaris HOM05D003253 ORTHO05D002078 2.8e-07 58.5 54 50.0
PSO761G0482 Papaver somniferum HOM05D003253 ORTHO05D002078 3.7e-07 58.2 71 39.4
QL06p002114 Quercus lobata HOM05D003253 ORTHO05D002078 3.7e-07 58.2 64 46.9
Duzib052G0544 Durio zibethinus HOM05D003253 ORTHO05D002078 4.9e-07 57.8 64 45.3
Medtr5g006390 Medicago truncatula HOM05D003253 ORTHO05D002078 4.9e-07 57.8 65 41.5
TPR.G37906 Trifolium pratense HOM05D003253 ORTHO05D002664 4.9e-07 57.8 60 43.3
Glyma.18G202950 Glycine max HOM05D003253 ORTHO05D002078 6.3e-07 57.4 65 41.5
Thecc.04G233500 Theobroma cacao HOM05D003253 ORTHO05D002078 6.3e-07 57.4 64 45.3
Gohir.A09G056601 Gossypium hirsutum HOM05D003253 ORTHO05D002078 8.3e-07 57.0 66 43.9
Gohir.D09G055900 Gossypium hirsutum HOM05D003253 ORTHO05D002078 8.3e-07 57.0 66 43.9
Gorai.006G069200 Gossypium raimondii HOM05D003253 ORTHO05D002078 8.3e-07 57.0 66 43.9
Lj6C607G12 Lonicera japonica HOM05D003253 ORTHO05D002078 8.3e-07 57.0 54 44.4
Sopen09g024360 Solanum pennellii HOM05D003253 ORTHO05D002078 1.1e-06 56.6 57 49.1
Actinidia25641 Actinidia chinensis HOM05D003253 ORTHO05D002078 1.4e-06 56.2 54 44.4
Actinidia35275 Actinidia chinensis HOM05D003253 ORTHO05D002078 1.4e-06 56.2 54 44.4
CsaV3_3G013260 Cucumis sativus L. HOM05D003253 ORTHO05D002078 1.8e-06 55.8 72 38.9
ECA240G1510 Erigeron canadensis HOM05D003253 ORTHO05D002078 1.8e-06 55.8 60 43.3
RhsimUnG0259000 Rhododendron simsii HOM05D003253 ORTHO05D002078 1.8e-06 55.8 56 46.4
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 2.4e-06 55.5 51 49.0
LjContig00408g0013219 Lotus japonicus HOM05D003253 ORTHO05D002078 2.4e-06 55.5 47 53.2
Nitab4.5_0004256g0010 Nicotiana tabacum HOM05D003253 ORTHO05D002078 2.4e-06 55.5 83 38.6
TAR633G1510 Trochodendron aralioides HOM05D003253 ORTHO05D002078 2.4e-06 55.5 66 42.4
HanXRQChr09g0248261 Helianthus annuus HOM05D003253 ORTHO05D002078 3.1e-06 55.1 48 52.1
ClCG05G005130 Citrullus lanatus HOM05D003253 ORTHO05D002078 4.1e-06 54.7 78 37.2
CiPaw.01G167300 Carya illinoinensis HOM05D003253 ORTHO05D002078 7.0e-06 53.9 64 45.3
FAN12G2226 Fragaria x ananassa HOM05D003253 ORTHO05D002078 7.0e-06 53.9 72 41.7
Lsat_1_v5_gn_7_64380 Lactuca sativa HOM05D003253 ORTHO05D002078 7.0e-06 53.9 43 55.8
Nn1g02344 Nelumbo nucifera HOM05D003253 ORTHO05D002078 7.0e-06 53.9 66 39.4
COL.COLO4_21490 Corchorus olitorius HOM05D003253 ORTHO05D002078 9.2e-06 53.5 73 41.1
Dinv44542 Davidia involucrata HOM05D003253 ORTHO05D002078 9.2e-06 53.5 45 48.9
FAN07G1764 Fragaria x ananassa HOM05D003253 ORTHO05D002078 9.2e-06 53.5 72 41.7
MD13G1194400 Malus domestica HOM05D003253 ORTHO05D002078 9.2e-06 53.5 49 51.0
Nitab4.5_0001342g0080 Nicotiana tabacum HOM05D003253 ORTHO05D002078 9.2e-06 53.5 60 45.0
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 9.2e-06 53.5 52 50.0
TPR.G5553 Trifolium pratense HOM05D003253 ORTHO05D002078 9.2e-06 53.5 80 40.0


User provided reference genes

Program Settings