Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g018590.2 Solanum lycopersicum HOM05D006988 ORTHO05D008731 5.8e-115 417.5 207 100.0
Sopen10g008330 Solanum pennellii HOM05D006988 ORTHO05D008731 3.5e-112 408.3 207 97.6
PGSC0003DMG400011763 Solanum tuberosum HOM05D006988 ORTHO05D008731 5.1e-111 404.4 207 96.1
CAN.G160.69 Capsicum annuum HOM05D006988 ORTHO05D008731 7.2e-89 330.9 207 82.6
Nitab4.5_0000882g0050 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.3e-87 326.6 224 79.9
Peaxi162Scf00350g00014 Petunia axillaris HOM05D006988 ORTHO05D008731 1.8e-87 326.2 219 78.5
Nitab4.5_0001501g0030 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.1e-84 317.0 204 83.3
Migut.B01575 Erythranthe guttata HOM05D006988 ORTHO05D008731 1.4e-84 316.6 189 82.5
Gohir.A07G147500 Gossypium hirsutum HOM05D006988 ORTHO05D008731 1.2e-83 313.5 194 79.9
Gohir.D07G153600 Gossypium hirsutum HOM05D006988 ORTHO05D008731 3.4e-83 312.0 197 79.2
Haze_02728 Corylus avellana HOM05D006988 ORTHO05D008731 4.5e-83 311.6 212 73.6
Gorai.001G175700 Gossypium raimondii HOM05D006988 ORTHO05D008731 7.7e-83 310.8 197 78.7
MELO3C021141.2 Cucumis melo HOM05D006988 ORTHO05D008731 1.4e-81 306.6 206 76.2
CsaV3_6G009120 Cucumis sativus L. HOM05D006988 ORTHO05D008731 1.4e-81 306.6 206 76.2
Duzib133G0505 Durio zibethinus HOM05D006988 ORTHO05D008731 1.4e-81 306.6 205 76.6
Prupe.2G135300 Prunus persica HOM05D006988 ORTHO05D008731 4.2e-81 305.1 211 73.9
Potri.014G058400 Populus trichocarpa HOM05D006988 ORTHO05D008731 9.4e-81 303.9 215 73.0
Lsat_1_v5_gn_7_10320 Lactuca sativa HOM05D006988 ORTHO05D008731 1.6e-80 303.1 197 76.1
SalBow5G4855 Salvia bowleyana HOM05D006988 ORTHO05D008731 2.7e-80 302.4 215 72.1
Manes.01G270400 Manihot esculenta HOM05D006988 ORTHO05D008731 3.6e-80 302.0 213 72.3
Sabra14G0042600 Salix brachista HOM05D006988 ORTHO05D008731 3.6e-80 302.0 215 73.5
Cc02_g24580 Coffea canephora HOM05D006988 ORTHO05D008731 4.7e-80 301.6 211 73.9
FvH4_7g10720 Fragaria vesca HOM05D006988 ORTHO05D008731 4.7e-80 301.6 215 73.0
FAN06G3033 Fragaria x ananassa HOM05D006988 ORTHO05D008731 6.1e-80 301.2 216 72.7
FAN06G2548 Fragaria x ananassa HOM05D006988 ORTHO05D008731 7.9e-80 300.8 217 72.4
Sed0016586 Sechium edule HOM05D006988 ORTHO05D008731 7.9e-80 300.8 183 79.8
COL.COLO4_12466 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.0e-79 300.4 202 76.7
QL04p035766 Quercus lobata HOM05D006988 ORTHO05D008731 1.4e-79 300.1 218 70.6
Thecc.01G386200 Theobroma cacao HOM05D006988 ORTHO05D008731 1.8e-79 299.7 204 76.0
FAN03G1007 Fragaria x ananassa HOM05D006988 ORTHO05D008731 2.3e-79 299.3 211 71.6
CANSAT01G0747 Cannabis sativa HOM05D006988 ORTHO05D008731 6.7e-79 297.7 213 72.3
Dinv43657 Davidia involucrata HOM05D006988 ORTHO05D008731 6.7e-79 297.7 225 69.3
ClCG06G003000 Citrullus lanatus HOM05D006988 ORTHO05D008731 1.1e-78 297.0 206 74.3
CSS0001978 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 1.5e-78 296.6 193 76.7
VMungo1383G3408 Vigna mungo HOM05D006988 ORTHO05D008731 1.5e-78 296.6 212 70.8
CiPaw.13G030900 Carya illinoinensis HOM05D006988 ORTHO05D008731 2.0e-78 296.2 203 74.4
Hund17063 Selenicereus undatus HOM05D006988 ORTHO05D008731 2.6e-78 295.8 199 74.4
CSS0011747 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 3.3e-78 295.4 193 76.2
Hma1.2p1_0341F.1_g130300 Hydrangea macrophylla HOM05D006988 ORTHO05D008731 7.4e-78 294.3 197 72.1
Lj9A563T51 Lonicera japonica HOM05D006988 ORTHO05D008731 7.4e-78 294.3 209 70.8
MD07G1111900 Malus domestica HOM05D006988 ORTHO05D008731 7.4e-78 294.3 211 71.6
Ca_27093_v3 Cicer arietinum L. HOM05D006988 ORTHO05D008731 2.2e-77 292.7 204 71.6
AUR62013709 Chenopodium quinoa HOM05D006988 ORTHO05D008731 4.8e-77 291.6 204 73.0
AUR62004148 Chenopodium quinoa HOM05D006988 ORTHO05D008731 6.3e-77 291.2 204 73.0
Lj1g0025695 Lotus japonicus HOM05D006988 ORTHO05D008731 1.4e-76 290.0 209 70.3
Rhsim07G0032500 Rhododendron simsii HOM05D006988 ORTHO05D008731 1.4e-76 290.0 180 76.1
EL10Ac1g00818 Beta vulgaris HOM05D006988 ORTHO05D008731 1.8e-76 289.7 204 74.0
SGA_v2.0_scaffold153G36954 Striga asiatica HOM05D006988 ORTHO05D008731 4.1e-76 288.5 241 65.1
Phvul.008G157000 Phaseolus vulgaris HOM05D006988 ORTHO05D008731 5.3e-76 288.1 205 70.2
Nn6g33931 Nelumbo nucifera HOM05D006988 ORTHO05D008731 6.9e-76 287.7 187 75.9
THA.LOC104814078 Tarenaya hassleriana HOM05D006988 ORTHO05D008731 1.2e-75 287.0 178 77.0
Glyma.01G076100 Glycine max HOM05D006988 ORTHO05D008731 1.5e-75 286.6 211 69.7
Atru.chr5.214 Acer truncatum HOM05D006988 ORTHO05D008731 2.6e-75 285.8 198 72.7
ECA236G3211 Erigeron canadensis HOM05D006988 ORTHO05D008731 3.4e-75 285.4 209 69.9
MBI04_g09512_MAGBIO Magnolia biondii HOM05D006988 ORTHO05D008731 3.4e-75 285.4 210 71.9
arahy.Tifrunner.gnm1.ann1.EWF75K Arachis hypogaea HOM05D006988 ORTHO05D008731 1.7e-74 283.1 202 70.3
arahy.Tifrunner.gnm1.ann1.I2GGUW Arachis hypogaea HOM05D006988 ORTHO05D008731 1.7e-74 283.1 202 70.3
DCAR_031865 Daucus carota HOM05D006988 ORTHO05D008731 2.9e-74 282.3 197 71.6
TAR636G1375 Trochodendron aralioides HOM05D006988 ORTHO05D008731 2.9e-74 282.3 174 76.4
Glyma.11G164037 Glycine max HOM05D006988 ORTHO05D008731 8.5e-74 280.8 206 69.4
HanXRQChr06g0168881 Helianthus annuus HOM05D006988 ORTHO05D008731 1.4e-73 280.0 200 71.5
Aqoxy7G00790 Aquilegia oxysepala HOM05D006988 ORTHO05D008731 1.9e-73 279.6 222 67.1
Medtr7g444820 Medicago truncatula HOM05D006988 ORTHO05D008731 7.2e-73 277.7 174 75.9
Sp6g00080 Schrenkiella parvula HOM05D006988 ORTHO05D008731 1.6e-72 276.6 203 69.0
ATR0317G076 Amborella trichopoda HOM05D006988 ORTHO05D008731 2.7e-72 275.8 209 68.9
CARHR248070 Cardamine hirsuta HOM05D006988 ORTHO05D008731 1.8e-71 273.1 181 72.4
Carub.0006s3719 Capsella rubella HOM05D006988 ORTHO05D008731 8.8e-71 270.8 178 72.5
BcaB01g02207 Brassica carinata HOM05D006988 ORTHO05D008731 1.5e-70 270.0 209 65.1
COL.COLO4_37993 Corchorus olitorius HOM05D006988 ORTHO05D008731 1.5e-70 270.0 189 72.0
C09p00070 Brassica napus HOM05D006988 ORTHO05D008731 5.7e-70 268.1 182 70.3
BraA09t35681Z Brassica rapa HOM05D006988 ORTHO05D008731 5.7e-70 268.1 182 70.3
AT4G00030 Arabidopsis thaliana HOM05D006988 ORTHO05D008731 9.7e-70 267.3 177 71.2
BcaC04g24207 Brassica carinata HOM05D006988 ORTHO05D008731 6.3e-69 264.6 182 69.8
BolC9t52942H Brassica oleracea HOM05D006988 ORTHO05D008731 6.3e-69 264.6 182 69.8
PSO170G6265 Papaver somniferum HOM05D006988 ORTHO05D008731 1.1e-68 263.8 176 73.3
AL6G53480 Arabidopsis lyrata HOM05D006988 ORTHO05D008731 3.1e-68 262.3 178 70.2
SEGI_39512 Sequoiadendron giganteum HOM05D006988 ORTHO05D008731 5.3e-68 261.5 175 70.9
Aa31LG5G100 Aethionema arabicum HOM05D006988 ORTHO05D008731 5.9e-67 258.1 195 65.6
TWI59G0585 Tripterygium wilfordii HOM05D006988 ORTHO05D008731 9.4e-65 250.8 210 66.2
TPR.G39083 Trifolium pratense HOM05D006988 ORTHO05D008731 1.2e-64 250.4 144 81.9
GSVIVG01018209001 Vitis vinifera HOM05D006988 ORTHO05D008731 1.6e-64 250.0 138 84.1
RcHm_v2.0_Chr1g0348671 Rosa chinensis HOM05D006988 ORTHO05D008731 4.7e-64 248.4 181 73.5
Ciclev10022767m.g Citrus clementina HOM05D006988 ORTHO05D008731 4.0e-63 245.4 138 84.1
Zm00001eb257570 Zea mays HOM05D006988 ORTHO05D008731 1.5e-62 243.4 173 67.6
Os04g0551700 Oryza sativa ssp. japonica HOM05D006988 ORTHO05D008731 7.5e-62 241.1 174 66.1
FAN01G2452 Fragaria x ananassa HOM05D006988 ORTHO05D008731 4.1e-60 235.3 177 70.6
MSTRG.20719 Avicennia marina HOM05D006988 ORTHO05D008731 4.5e-59 231.9 179 70.4
Ah.16g110010 Amaranthus hybridus HOM05D006988 ORTHO05D008731 2.2e-58 229.6 152 74.3
Eucgr.D02502 Eucalyptus grandis HOM05D006988 ORTHO05D008731 3.8e-58 228.8 152 75.0
Pp3c14_7270 Physcomitrium patens HOM05D006988 ORTHO05D008731 1.9e-57 226.5 199 58.8
Cpa.g.sc620.2 Carica papaya HOM05D006988 ORTHO05D008731 4.7e-56 221.9 182 64.8
SMO367G0814 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 1.0e-55 220.7 170 60.6
SMO367G0459 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 5.2e-55 218.4 170 60.0
Mapoly0004s0296 Marchantia polymorpha HOM05D006988 ORTHO05D008731 1.5e-54 216.9 178 58.4
Sc23g0003890 Simmondsia chinensis HOM05D006988 ORTHO05D008731 2.0e-54 216.5 164 63.4
Psat3g157120 Pisum sativum HOM05D006988 ORTHO05D008731 3.0e-47 192.6 147 69.4
vmacro13459 Vaccinium macrocarpon HOM05D006988 ORTHO05D008731 1.2e-46 190.7 152 67.1
Thhalv10028565m.g Eutrema salsugineum HOM05D000447 ORTHO05D000315 1.2e-40 170.6 145 61.4
SMO367G0117 Selaginella moellendorffii HOM05D012767 ORTHO05D008731 1.3e-37 160.6 156 52.6
C03p91270 Brassica napus HOM05D006988 ORTHO05D008731 8.3e-37 157.9 123 63.4
BcaC03g13893 Brassica carinata HOM05D006988 ORTHO05D008731 1.2e-35 154.1 196 45.9
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 1.7e-34 150.2 183 46.4
AagrBONN_evm.TU.Sc2ySwM_362.1347 Anthoceros agrestis HOM05D006988 ORTHO05D008731 1.1e-33 147.5 116 62.1
C02p10970 Brassica napus HOM05D006988 ORTHO05D008731 1.5e-33 147.1 91 72.5
BolC2t07167H Brassica oleracea HOM05D006988 ORTHO05D008731 5.6e-33 145.2 84 76.2
PRCOL_00005443 Prasinoderma coloniale HOM05D006988 ORTHO05D008731 1.1e-31 141.0 226 38.1
BcaC01g03084 Brassica carinata HOM05D006988 ORTHO05D008731 1.0e-26 124.4 170 41.2
MCO12G266 Micromonas commoda HOM05D006988 ORTHO05D008731 2.3e-23 113.2 177 39.0
unitig_26.g9723 Utricularia gibba HOM05D000502 ORTHO05D000356 5.2e-23 112.1 112 56.2
Lalb_Chr19g0127481 Lupinus albus HOM05D006988 ORTHO05D008731 1.2e-22 110.9 55 87.3
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.2e-21 106.7 97 60.8
A09p00790 Brassica napus HOM05D006988 ORTHO05D008731 1.2e-16 90.9 101 51.5
Actinidia12175 Actinidia chinensis HOM05D006988 ORTHO05D008731 1.1e-15 87.8 82 54.9
BolC3t17906H Brassica oleracea HOM05D001199 ORTHO05D001013 7.1e-12 75.1 83 48.2
Dinv13821 Davidia involucrata HOM05D006988 ORTHO05D008731 1.2e-11 74.3 63 63.5
C03p56160 Brassica napus HOM05D001199 ORTHO05D001013 2.3e-10 70.1 85 47.1
RcHm_v2.0_Chr1g0348661 Rosa chinensis HOM05D006988 ORTHO05D008731 1.6e-08 63.9 33 81.8
Actinidia22773 Actinidia chinensis HOM05D006988 ORTHO05D008731 2.1e-08 63.5 34 79.4
Haze_25195 Corylus avellana HOM05D005663 ORTHO05D007258 6.2e-08 62.0 233 26.2
GSVIVG01026586001 Vitis vinifera HOM05D005663 ORTHO05D007258 1.8e-07 60.5 109 32.1
Haze_25187 Corylus avellana HOM05D005663 ORTHO05D007258 4.0e-07 59.3 173 27.7
Mapoly0058s0022 Marchantia polymorpha HOM05D005663 ORTHO05D007258 5.3e-07 58.9 206 26.7
Lalb_Chr19g0127491 Lupinus albus HOM05D006988 ORTHO05D008731 9.0e-07 58.2 81 44.4
HPP92_016149 Vanilla planifolia HOM05D005663 ORTHO05D007258 2.0e-06 57.0 208 22.1
Gohir.A06G149400 Gossypium hirsutum HOM05D005663 ORTHO05D007258 7.6e-06 55.1 191 22.5
Gorai.010G181700 Gossypium raimondii HOM05D005663 ORTHO05D007258 9.9e-06 54.7 191 23.0


User provided reference genes

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