Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.4e-101 371.3 189 100.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 5.1e-49 198.4 137 70.8
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-41 171.8 238 45.0
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-40 169.5 314 36.0
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.3e-40 168.7 240 41.7
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-36 156.4 159 50.3
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-35 151.8 196 41.8
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-33 145.2 241 37.8
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-31 140.2 315 32.7
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-31 139.8 233 39.1
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-30 135.2 225 35.6
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-30 135.2 226 35.8
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 8.4e-28 127.9 121 54.5
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-27 125.6 139 44.6
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 4.2e-27 125.6 302 34.4
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 2.1e-26 123.2 206 44.2
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-26 122.5 222 34.2
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-25 120.6 112 49.1
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-23 112.8 150 42.0
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.4e-22 110.5 159 40.9
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-22 108.6 177 36.2
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-21 107.5 178 35.4
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-20 102.1 63 84.1
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-19 100.9 63 84.1
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-19 100.5 67 68.7
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 5.5e-19 98.6 182 34.1
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-18 97.1 204 31.4
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 6.0e-18 95.1 212 31.1
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-18 94.7 215 28.8
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-17 94.0 174 34.5
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.3e-17 94.0 87 50.6
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.3e-17 93.2 96 45.8
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.0e-17 92.8 63 77.8
Nitab4.5_0012868g0030 Nicotiana tabacum HOM05D003888 ORTHO05D007163 3.9e-17 92.4 76 53.9
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 8.7e-17 91.3 103 47.6
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-16 90.9 62 72.6
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 1.9e-16 90.1 73 57.5
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 3.3e-16 89.4 210 28.6
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.4e-16 88.2 76 61.8
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-16 87.8 221 28.5
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 9.6e-16 87.8 83 50.6
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.6e-16 87.8 63 68.3
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.6e-16 87.8 63 68.3
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-15 87.4 62 69.4
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 2.1e-15 86.7 238 27.3
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-15 86.7 76 61.8
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 2.8e-15 86.3 236 27.1
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 2.8e-15 86.3 63 69.8
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-15 86.3 62 69.4
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 4.8e-15 85.5 217 27.2
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 8.2e-15 84.7 236 25.8
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 8.2e-15 84.7 61 72.1
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-14 84.3 75 61.3
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-14 83.2 215 27.4
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 3.1e-14 82.8 85 55.3
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.1e-14 82.8 286 24.8
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 5.3e-14 82.0 80 56.2
Nitab4.5_0000970g0140 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.2e-13 80.9 80 50.0
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.5e-13 80.5 75 48.0
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 1.5e-13 80.5 247 25.9
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 1.5e-13 80.5 64 65.6
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-13 80.5 83 53.0
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-13 80.5 62 66.1
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 2.0e-13 80.1 63 63.5
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 2.6e-13 79.7 75 48.0
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.5e-13 79.0 63 63.5
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 4.5e-13 79.0 76 56.6
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 7.6e-13 78.2 75 46.7
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.6e-13 78.2 83 45.8
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.0e-12 77.8 60 65.0
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-12 77.8 77 50.6
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-12 77.4 73 47.9
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.3e-12 77.4 73 47.9
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-12 77.4 62 64.5
Hund10867 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.7e-12 77.0 90 38.9
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-12 77.0 63 55.6
Nitab4.5_0000037g0270 Nicotiana tabacum HOM05D008541 ORTHO05D010458 2.2e-12 76.6 96 42.7
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.2e-12 76.6 268 25.4
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.2e-12 76.6 84 40.5
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-12 76.6 50 78.0
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-12 76.6 50 78.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.9e-12 76.3 187 33.7
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-12 76.3 74 51.4
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 6.5e-12 75.1 85 51.8
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 6.5e-12 75.1 82 48.8
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 1.4e-11 73.9 66 60.6
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-11 73.6 71 49.3
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 2.5e-11 73.2 75 45.3
Hund15065 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.5e-11 73.2 90 38.9
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-11 72.4 70 60.0
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-11 72.0 57 64.9
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 7.1e-11 71.6 62 59.7
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.1e-11 71.6 63 54.0
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-11 71.6 64 51.6
Sopen04g001780 Solanum pennellii HOM05D003888 ORTHO05D007163 9.3e-11 71.2 70 52.9
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-10 70.9 65 56.9
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-10 70.9 58 67.2
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 1.2e-10 70.9 69 55.1
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-10 70.1 57 64.9
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-10 69.7 57 61.4
Sc02g0005550 Simmondsia chinensis HOM05D003888 ORTHO05D011649 3.5e-10 69.3 84 36.9
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-10 69.3 62 53.2
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.6e-10 68.9 62 59.7
EL10Ac3g06642 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-10 68.2 73 45.2
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-09 67.8 46 73.9
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-09 67.4 58 51.7
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 2.3e-09 66.6 60 50.0
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.0e-09 66.2 52 59.6
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.9e-09 65.9 51 58.8
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 3.9e-09 65.9 51 58.8
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.1e-08 64.3 96 34.4
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-08 64.3 195 29.7
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 2.5e-08 63.2 70 44.3
Manes.16G080850 Manihot esculenta HOM05D009290 ORTHO05D009597 2.5e-08 63.2 84 33.3
Hund08561 Selenicereus undatus HOM05D008455 ORTHO05D009597 3.3e-08 62.8 99 36.4
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 4.3e-08 62.4 96 31.2
Manes.07G063157 Manihot esculenta HOM05D009290 ORTHO05D009597 4.3e-08 62.4 96 31.2
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.7e-08 62.0 53 56.6
Manes.08G084511 Manihot esculenta HOM05D009290 ORTHO05D009597 7.4e-08 61.6 96 31.2
Manes.11G040473 Manihot esculenta HOM05D009290 ORTHO05D009597 7.4e-08 61.6 113 28.3
Manes.15G180436 Manihot esculenta HOM05D009290 ORTHO05D009597 9.7e-08 61.2 80 33.8
Sc09g0006190 Simmondsia chinensis HOM05D009146 ORTHO05D027014 1.3e-07 60.8 97 34.0
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-07 60.5 69 44.9
Manes.12G086248 Manihot esculenta HOM05D009290 ORTHO05D009597 2.2e-07 60.1 96 30.2
Manes.06G160267 Manihot esculenta HOM05D009290 ORTHO05D009597 2.8e-07 59.7 79 32.9
Manes.08G028050 Manihot esculenta HOM05D009290 ORTHO05D009597 3.7e-07 59.3 96 31.2
Manes.18G114301 Manihot esculenta HOM05D009290 ORTHO05D009597 3.7e-07 59.3 96 31.2
EL10Ac2g03389 Beta vulgaris HOM05D000107 ORTHO05D000062 4.8e-07 58.9 53 47.2
AUR62037959 Chenopodium quinoa HOM05D000107 ORTHO05D009597 4.8e-07 58.9 93 36.6
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.8e-07 58.9 55 49.1
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.8e-07 58.9 66 45.5
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.8e-07 58.9 107 35.5
AUR62039309 Chenopodium quinoa HOM05D008455 ORTHO05D009597 8.2e-07 58.2 93 36.6
Nitab4.5_0005770g0030 Nicotiana tabacum HOM05D009290 ORTHO05D009597 8.2e-07 58.2 79 30.4
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.2e-07 58.2 64 46.9
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.2e-07 58.2 64 45.3
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 1.1e-06 57.8 80 31.2
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 1.1e-06 57.8 80 31.2
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-06 57.8 70 38.6
EL10Ac9g22691 Beta vulgaris HOM05D008455 ORTHO05D009597 1.4e-06 57.4 80 30.0
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 1.4e-06 57.4 43 60.5
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 2.4e-06 56.6 76 31.6
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.1e-06 56.2 124 32.3
AUR62037945 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.1e-06 56.2 71 36.6
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.1e-06 56.2 94 37.2
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-06 56.2 120 35.0
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 4.1e-06 55.8 49 51.0
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-06 55.5 64 43.8
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.0e-06 54.7 44 54.5
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.0e-06 54.7 61 52.5


User provided reference genes

Program Settings