Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 4.8e-44 181.8 98 100.0
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 6.5e-41 171.4 98 95.9
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 3.0e-30 136.0 65 92.3
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 9.0e-27 124.4 81 77.8
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.0e-21 106.7 92 64.1
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-20 103.2 90 64.4
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.3e-20 101.7 90 63.3
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.8e-19 100.1 92 60.9
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.1e-19 97.8 90 63.3
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-17 93.2 90 61.1
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 3.8e-17 92.4 98 55.1
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 3.8e-17 92.4 82 61.0
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.0e-17 92.0 84 61.9
PGSC0003DMG400020028 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.5e-16 89.7 98 61.2
PGSC0003DMG400022822 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.1e-15 86.7 74 75.7
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 6.1e-15 85.1 95 53.7
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.9e-15 84.7 80 57.5
PGSC0003DMG400009559 Solanum tuberosum HOM05D007556 ORTHO05D002252 7.9e-15 84.7 82 54.9
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.8e-14 83.6 80 60.0
PGSC0003DMG400009558 Solanum tuberosum HOM05D007556 ORTHO05D002252 1.3e-12 77.4 75 60.0
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.1e-11 74.3 90 46.7
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-11 73.6 71 57.7
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 9.1e-11 71.2 92 43.5
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 1.2e-10 70.9 92 41.3
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.6e-10 70.5 94 42.6
CAN.G132.4 Capsicum annuum HOM05D007556 ORTHO05D002252 5.9e-10 68.6 52 69.2
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 5.9e-10 68.6 98 44.9
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 5.9e-10 68.6 96 42.7
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 7.7e-10 68.2 78 44.9
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.3e-09 67.4 95 41.1
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 1.3e-09 67.4 94 44.7
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.9e-09 66.2 103 37.9
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 3.8e-09 65.9 95 40.0
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 3.8e-09 65.9 77 49.4
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.8e-09 65.9 83 43.4
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 5.0e-09 65.5 98 42.9
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 5.0e-09 65.5 101 40.6
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 6.5e-09 65.1 103 37.9
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 6.5e-09 65.1 103 37.9
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 6.5e-09 65.1 67 46.3
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 6.5e-09 65.1 101 40.6
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 1.5e-08 63.9 90 43.3
Manes.10G047933 Manihot esculenta HOM05D007556 ORTHO05D002252 1.5e-08 63.9 77 46.8
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 3.2e-08 62.8 102 40.2
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 3.2e-08 62.8 84 42.9
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 4.2e-08 62.4 85 40.0
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 4.2e-08 62.4 94 38.3
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 7.2e-08 61.6 88 42.0
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 7.2e-08 61.6 102 40.2
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 7.2e-08 61.6 76 40.8
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 7.2e-08 61.6 89 40.4
CANSAT56G0346 Cannabis sativa HOM05D007556 ORTHO05D002252 9.4e-08 61.2 105 39.0
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 9.4e-08 61.2 103 35.9
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 1.6e-07 60.5 73 39.7
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 1.6e-07 60.5 84 41.7
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.6e-07 60.5 103 36.9
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.1e-07 60.1 67 52.2
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 2.1e-07 60.1 70 45.7
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 2.7e-07 59.7 63 54.0
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 3.6e-07 59.3 85 42.4
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 3.6e-07 59.3 116 37.9
AUR62011343 Chenopodium quinoa HOM05D013587 ORTHO05D002252 4.7e-07 58.9 75 40.0
AUR62011345 Chenopodium quinoa HOM05D013587 ORTHO05D002252 4.7e-07 58.9 75 40.0
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 4.7e-07 58.9 85 43.5
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 6.1e-07 58.5 102 38.2
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 6.1e-07 58.5 76 42.1
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 8.0e-07 58.2 56 53.6
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 8.0e-07 58.2 75 44.0
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.0e-06 57.8 125 33.6
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.0e-06 57.8 55 50.9
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.0e-06 57.8 55 50.9
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 1.4e-06 57.4 73 49.3
AUR62016715 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.8e-06 57.0 88 38.6
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.8e-06 57.0 55 50.9
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 1.8e-06 57.0 87 43.7
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 1.8e-06 57.0 84 42.9
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.8e-06 57.0 94 43.6
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 1.8e-06 57.0 85 36.5
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 2.3e-06 56.6 75 45.3
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 3.0e-06 56.2 104 39.4
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 3.0e-06 56.2 87 41.4
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 3.0e-06 56.2 82 40.2
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 3.0e-06 56.2 76 43.4
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.0e-06 56.2 94 39.4
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 4.0e-06 55.8 100 42.0
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 4.0e-06 55.8 49 51.0
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 4.0e-06 55.8 88 39.8
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 4.0e-06 55.8 83 36.1
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 5.2e-06 55.5 93 38.7
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 5.2e-06 55.5 86 39.5
Peaxi162Scf00016g00938 Petunia axillaris HOM05D007227 ORTHO05D002252 5.2e-06 55.5 76 38.2
Psat2g007160 Pisum sativum HOM05D007227 ORTHO05D002252 6.7e-06 55.1 73 41.1
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 6.7e-06 55.1 73 43.8
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 6.7e-06 55.1 73 43.8
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 8.8e-06 54.7 87 41.4
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 8.8e-06 54.7 71 42.3
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 8.8e-06 54.7 48 54.2


User provided reference genes

Program Settings