Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g008920.1 Solanum lycopersicum HOM05D009288 ORTHO05D011444 4.3e-253 877.5 434 100.0
Sopen10g004710 Solanum pennellii HOM05D009288 ORTHO05D011444 8.7e-246 853.2 434 97.2
PGSC0003DMG400022835 Solanum tuberosum HOM05D009288 ORTHO05D011444 4.3e-229 797.7 435 91.5
Nitab4.5_0002114g0180 Nicotiana tabacum HOM05D009288 ORTHO05D011444 1.5e-192 676.4 435 78.2
CAN.G1876.1 Capsicum annuum HOM05D009288 ORTHO05D011444 4.4e-181 638.3 434 75.8
Nitab4.5_0005043g0050 Nicotiana tabacum HOM05D009288 ORTHO05D011444 1.5e-176 623.2 434 73.7
Peaxi162Scf00490g00074 Petunia axillaris HOM05D009288 ORTHO05D011444 3.5e-170 602.1 436 70.9
Nitab4.5_0005016g0020 Nicotiana tabacum HOM05D009288 ORTHO05D000173 1.6e-146 523.5 444 63.3
Peaxi162Scf00697g00054 Petunia axillaris HOM05D009288 ORTHO05D011444 3.9e-145 518.8 453 63.6
PGSC0003DMG400031772 Solanum tuberosum HOM05D009288 ORTHO05D011444 1.4e-139 500.4 437 61.8
Sopen02g022400 Solanum pennellii HOM05D009288 ORTHO05D011444 6.0e-138 495.0 437 60.6
CAN.G79.87 Capsicum annuum HOM05D009288 ORTHO05D011444 1.0e-129 467.6 438 58.4
Nitab4.5_0008221g0030 Nicotiana tabacum HOM05D000288 ORTHO05D011444 2.7e-122 443.0 413 59.6
Oeu001096.1 Olea europaea HOM05D009288 ORTHO05D011444 6.9e-102 375.2 443 50.1
Oeu012164.1 Olea europaea HOM05D009288 ORTHO05D011444 4.2e-99 365.9 448 50.7
MSTRG.15840 Avicennia marina HOM05D009288 ORTHO05D011444 7.4e-96 355.1 435 49.9
Cc02_g14100 Coffea canephora HOM05D009288 ORTHO05D011444 2.2e-95 353.6 447 48.8
Migut.M01095 Erythranthe guttata HOM05D009288 ORTHO05D011444 2.6e-93 346.7 445 47.9
MSTRG.7368 Avicennia marina HOM05D009288 ORTHO05D011444 5.9e-93 345.5 437 48.1
Migut.H01464 Erythranthe guttata HOM05D009288 ORTHO05D011444 1.2e-90 337.8 437 48.3
DCAR_004037 Daucus carota HOM05D009288 ORTHO05D011444 7.2e-83 312.0 438 45.9
SalBow8G2277 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.6e-82 310.8 227 66.1
SGA_v2.0_scaffold309G48159 Striga asiatica HOM05D009288 ORTHO05D011444 4.4e-80 302.8 446 43.9
vmacro03898 Vaccinium macrocarpon HOM05D000288 ORTHO05D011444 4.4e-80 302.8 237 61.2
DCAR_028039 Daucus carota HOM05D009288 ORTHO05D011444 4.8e-79 299.3 442 43.2
Solyc02g077490.3 Solanum lycopersicum HOM05D009288 ORTHO05D011444 1.7e-76 290.8 168 79.2
CSS0036897 Camellia sinensis var. sinensis HOM05D009288 ORTHO05D011444 2.5e-75 287.0 227 60.8
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 4.2e-75 286.2 227 60.8
SalBow7G0267 Salvia bowleyana HOM05D009288 ORTHO05D011444 5.5e-75 285.8 257 58.0
SalBow7G2427 Salvia bowleyana HOM05D009288 ORTHO05D011444 5.5e-75 285.8 257 58.0
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 9.4e-75 285.0 227 59.9
SGA_v2.0_scaffold16G07649 Striga asiatica HOM05D009288 ORTHO05D011444 1.2e-72 278.1 447 39.4
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 2.3e-68 263.8 224 58.9
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 8.6e-68 261.9 205 63.9
Hma1.2p1_1465F.1_g285290 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 3.3e-43 180.3 150 57.3
Actinidia05663 Actinidia chinensis HOM05D000288 ORTHO05D000173 2.4e-17 94.4 73 58.9
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 8.1e-10 69.3 183 26.8
QL03p014613 Quercus lobata HOM05D008582 ORTHO05D010200 4.9e-07 60.1 186 28.5
Migut.N00933 Erythranthe guttata HOM05D000886 ORTHO05D000525 1.4e-06 58.5 116 36.2
FAN26G1429 Fragaria x ananassa HOM05D000886 ORTHO05D000525 7.1e-06 56.2 217 27.2


User provided reference genes

Program Settings