Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g008660.2 Solanum lycopersicum HOM05D000430 ORTHO05D000305 5.5e-29 130.2 61 100.0
PGSC0003DMG400026632 Solanum tuberosum HOM05D000430 ORTHO05D000305 2.8e-25 117.9 61 88.5
Solyc10g008650.2 Solanum lycopersicum HOM05D000430 ORTHO05D000305 2.4e-24 114.8 61 90.2
Sopen10g004460 Solanum pennellii HOM05D000430 ORTHO05D000305 5.3e-24 113.6 61 88.5
Nitab4.5_0001256g0050 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.1e-21 105.9 61 80.3
Nitab4.5_0008553g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.9e-21 105.1 61 80.3
Nitab4.5_0001256g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 6.1e-20 100.1 61 73.8
Nitab4.5_0001256g0060 Nicotiana tabacum HOM05D000430 ORTHO05D000305 6.1e-20 100.1 61 75.4
Peaxi162Scf00269g00122 Petunia axillaris HOM05D000430 ORTHO05D000305 6.1e-20 100.1 61 77.0
Nitab4.5_0003195g0050 Nicotiana tabacum HOM05D000430 ORTHO05D000305 7.9e-20 99.8 61 77.0
Peaxi162Scf00269g00135 Petunia axillaris HOM05D000430 ORTHO05D000305 1.8e-19 98.6 61 75.4
Nitab4.5_0001256g0040 Nicotiana tabacum HOM05D000430 ORTHO05D000305 8.7e-19 96.3 61 72.1
Peaxi162Scf00530g00051 Petunia axillaris HOM05D000430 ORTHO05D000305 1.1e-18 95.9 61 72.1
Nitab4.5_0007526g0030 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.5e-18 95.5 61 72.1
Solyc10g008665.1 Solanum lycopersicum HOM05D000430 ORTHO05D000305 1.5e-18 95.5 59 79.7
Nitab4.5_0002657g0030 Nicotiana tabacum HOM05D000430 ORTHO05D000305 2.5e-18 94.7 61 73.8
Sopen10g004470 Solanum pennellii HOM05D000430 ORTHO05D000305 5.7e-18 93.6 59 78.0
PGSC0003DMG400006485 Solanum tuberosum HOM05D000430 ORTHO05D000305 4.8e-17 90.5 61 70.5
Nitab4.5_0006651g0010 Nicotiana tabacum HOM05D000430 ORTHO05D000305 1.8e-16 88.6 60 70.0
Peaxi162Scf00086g00011 Petunia axillaris HOM05D000430 ORTHO05D000305 6.5e-14 80.1 61 63.9
PGSC0003DMG400007692 Solanum tuberosum HOM05D000430 ORTHO05D000305 5.5e-13 77.0 61 57.4
SalBow7G0986 Salvia bowleyana HOM05D000430 ORTHO05D000305 3.6e-12 74.3 61 52.5
SalBow1G3745 Salvia bowleyana HOM05D000430 ORTHO05D000305 1.4e-11 72.4 59 52.5
SGA_v2.0_scaffold34G13910 Striga asiatica HOM05D000430 ORTHO05D000305 1.8e-11 72.0 61 50.8
SGA_v2.0_scaffold49G18314 Striga asiatica HOM05D000430 ORTHO05D000305 1.8e-11 72.0 61 54.1
PGSC0003DMG400026629 Solanum tuberosum HOM05D000430 ORTHO05D000305 5.1e-11 70.5 62 58.1
MSTRG.12296 Avicennia marina HOM05D000430 ORTHO05D000305 8.8e-11 69.7 61 45.9
Dinv24790 Davidia involucrata HOM05D000430 ORTHO05D000305 1.1e-10 69.3 61 54.1
SalBow1G4056 Salvia bowleyana HOM05D000430 ORTHO05D000305 1.1e-10 69.3 59 52.5
SalBow6G2678 Salvia bowleyana HOM05D000430 ORTHO05D000305 1.1e-10 69.3 61 45.9
MSTRG.12318 Avicennia marina HOM05D000430 ORTHO05D000305 2.0e-10 68.6 61 45.9
MSTRG.6528 Avicennia marina HOM05D000430 ORTHO05D000305 3.3e-10 67.8 59 50.8
Migut.B01650 Erythranthe guttata HOM05D000430 ORTHO05D000305 4.4e-10 67.4 62 50.0
unitig_8.g3941 Utricularia gibba HOM05D000430 ORTHO05D000305 4.4e-10 67.4 62 54.8
Migut.M00348 Erythranthe guttata HOM05D000430 ORTHO05D000305 7.4e-10 66.6 61 47.5
Oeu005772.1 Olea europaea HOM05D000430 ORTHO05D000305 7.4e-10 66.6 61 45.9
Oeu046213.1 Olea europaea HOM05D000430 ORTHO05D000305 7.4e-10 66.6 61 49.2
SalBow5G5275 Salvia bowleyana HOM05D000430 ORTHO05D000305 7.4e-10 66.6 62 51.6
PGSC0003DMG400038389 Solanum tuberosum HOM05D000430 ORTHO05D000305 7.4e-10 66.6 63 57.1
TWI60G1294 Tripterygium wilfordii HOM05D000430 ORTHO05D000305 9.7e-10 66.2 58 53.4
unitig_26.g9935 Utricularia gibba HOM05D000430 ORTHO05D000305 1.7e-09 65.5 62 48.4
SalBow7G0774 Salvia bowleyana HOM05D000430 ORTHO05D000305 2.2e-09 65.1 61 45.9
SalBow7G4201 Salvia bowleyana HOM05D000430 ORTHO05D000305 2.2e-09 65.1 59 44.1
Solyc10g008680.3 Solanum lycopersicum HOM05D000430 ORTHO05D000305 2.8e-09 64.7 63 55.6
MSTRG.17988 Avicennia marina HOM05D000430 ORTHO05D000305 3.7e-09 64.3 61 44.3
Oeu033082.1 Olea europaea HOM05D000430 ORTHO05D000305 3.7e-09 64.3 59 49.2
GSVIVG01000469001 Vitis vinifera HOM05D000430 ORTHO05D000305 3.7e-09 64.3 61 45.9
Dinv15237 Davidia involucrata HOM05D000430 ORTHO05D000305 6.3e-09 63.5 62 48.4
Migut.M00354 Erythranthe guttata HOM05D000430 ORTHO05D000305 6.3e-09 63.5 60 48.3
GSVIVG01000470001 Vitis vinifera HOM05D000430 ORTHO05D000305 6.3e-09 63.5 61 45.9
Dinv15238 Davidia involucrata HOM05D000430 ORTHO05D000305 8.2e-09 63.2 61 47.5
HanXRQChr00c0016g0571081 Helianthus annuus HOM05D000430 ORTHO05D000305 8.2e-09 63.2 59 49.2
SalBow1G4105 Salvia bowleyana HOM05D000430 ORTHO05D000305 8.2e-09 63.2 58 48.3
Oeu042237.1 Olea europaea HOM05D000430 ORTHO05D000305 1.1e-08 62.8 61 44.3
Oeu042238.1 Olea europaea HOM05D000430 ORTHO05D000305 1.1e-08 62.8 61 44.3
SalBow7G4008 Salvia bowleyana HOM05D000430 ORTHO05D000305 1.1e-08 62.8 59 44.1
arahy.Tifrunner.gnm1.ann1.8AYF8G Arachis hypogaea HOM05D000430 ORTHO05D000305 1.4e-08 62.4 58 44.8
DCAR_021218 Daucus carota HOM05D000430 ORTHO05D000305 1.4e-08 62.4 61 41.0
arahy.Tifrunner.gnm1.ann1.0N1ZDK Arachis hypogaea HOM05D000430 ORTHO05D000305 1.8e-08 62.0 58 44.8
HanXRQChr02g0051061 Helianthus annuus HOM05D000430 ORTHO05D000305 1.8e-08 62.0 59 47.5
SGA_v2.0_scaffold95G28892 Striga asiatica HOM05D000430 ORTHO05D000305 1.8e-08 62.0 59 50.8
Aqoxy1G02714 Aquilegia oxysepala HOM05D000430 ORTHO05D000305 2.4e-08 61.6 58 46.6
MSTRG.14174 Avicennia marina HOM05D000430 ORTHO05D000305 2.4e-08 61.6 59 40.7
Lsat_1_v5_gn_8_131040 Lactuca sativa HOM05D000430 ORTHO05D000305 2.4e-08 61.6 61 41.0
Oeu033084.1 Olea europaea HOM05D000430 ORTHO05D000305 2.4e-08 61.6 59 45.8
Oeu033085.1 Olea europaea HOM05D000430 ORTHO05D000305 2.4e-08 61.6 59 45.8
Phvul.008G029400 Phaseolus vulgaris HOM05D000430 ORTHO05D000305 2.4e-08 61.6 58 46.6
DCAR_021217 Daucus carota HOM05D000430 ORTHO05D000305 3.1e-08 61.2 61 42.6
Lsat_1_v5_gn_8_107560 Lactuca sativa HOM05D000430 ORTHO05D000305 3.1e-08 61.2 61 42.6
TAR369G0804 Trochodendron aralioides HOM05D000430 ORTHO05D000305 3.1e-08 61.2 58 48.3
MSTRG.6527 Avicennia marina HOM05D000430 ORTHO05D000305 4.1e-08 60.8 60 43.3
Migut.M00341 Erythranthe guttata HOM05D000430 ORTHO05D000305 4.1e-08 60.8 60 43.3
Solyc12g044660.3 Solanum lycopersicum HOM05D000430 ORTHO05D000305 4.1e-08 60.8 61 54.1
Hma1.2p1_0044F.1_g026370 Hydrangea macrophylla HOM05D000430 ORTHO05D000305 5.3e-08 60.5 61 49.2
Lsat_1_v5_gn_2_39381 Lactuca sativa HOM05D000430 ORTHO05D000305 5.3e-08 60.5 61 39.3
Migut.M00345 Erythranthe guttata HOM05D000430 ORTHO05D000305 6.9e-08 60.1 62 45.2
HanXRQChr15g0485451 Helianthus annuus HOM05D000430 ORTHO05D000305 6.9e-08 60.1 59 44.1
SalBow1G2030 Salvia bowleyana HOM05D000430 ORTHO05D000305 6.9e-08 60.1 60 45.0
VMungo1383G2341 Vigna mungo HOM05D000430 ORTHO05D000305 6.9e-08 60.1 58 44.8
arahy.Tifrunner.gnm1.ann1.PYMC5A Arachis hypogaea HOM05D000430 ORTHO05D000305 9.1e-08 59.7 60 41.7
HanXRQChr17g0559381 Helianthus annuus HOM05D000430 ORTHO05D000305 9.1e-08 59.7 61 42.6
Lsat_1_v5_gn_8_130961 Lactuca sativa HOM05D000430 ORTHO05D000305 9.1e-08 59.7 59 44.1
Migut.D01942 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.2e-07 59.3 60 46.7
Lsat_1_v5_gn_8_131420 Lactuca sativa HOM05D000430 ORTHO05D000305 1.2e-07 59.3 59 42.4
SalBow7G3329 Salvia bowleyana HOM05D000430 ORTHO05D000305 1.2e-07 59.3 60 43.3
Migut.M00344 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.5e-07 58.9 61 42.6
Glyma.08G249500 Glycine max HOM05D000430 ORTHO05D000305 1.5e-07 58.9 58 43.1
Lsat_1_v5_gn_8_131480 Lactuca sativa HOM05D000430 ORTHO05D000305 1.5e-07 58.9 59 42.4
arahy.Tifrunner.gnm1.ann1.2KRB9I Arachis hypogaea HOM05D000430 ORTHO05D000305 2.0e-07 58.5 60 40.0
arahy.Tifrunner.gnm1.ann1.W8ALCK Arachis hypogaea HOM05D000430 ORTHO05D000305 2.0e-07 58.5 60 40.0
HanXRQChr17g0555501 Helianthus annuus HOM05D000430 ORTHO05D000305 2.0e-07 58.5 59 45.8
HanXRQChr17g0557301 Helianthus annuus HOM05D000430 ORTHO05D000305 2.6e-07 58.2 61 39.3
Lsat_1_v5_gn_8_126061 Lactuca sativa HOM05D000430 ORTHO05D000305 2.6e-07 58.2 59 44.1
Sabra17G0083500 Salix brachista HOM05D000430 ORTHO05D000305 2.6e-07 58.2 56 44.6
SalBow7G3595 Salvia bowleyana HOM05D000430 ORTHO05D000305 2.6e-07 58.2 59 42.4
TAR626G1576 Trochodendron aralioides HOM05D000430 ORTHO05D000305 2.6e-07 58.2 58 43.1
MELO3C020675.2 Cucumis melo HOM05D000430 ORTHO05D000305 3.4e-07 57.8 58 43.1
HanXRQChr16g0508601 Helianthus annuus HOM05D000430 ORTHO05D000305 3.4e-07 57.8 60 48.3
HanXRQChr17g0554241 Helianthus annuus HOM05D000430 ORTHO05D000305 3.4e-07 57.8 59 42.4
Oeu061577.1 Olea europaea HOM05D000430 ORTHO05D000305 3.4e-07 57.8 61 42.6
TAR626G0709 Trochodendron aralioides HOM05D000430 ORTHO05D000305 3.4e-07 57.8 58 41.4
TAR633G0297 Trochodendron aralioides HOM05D000430 ORTHO05D000305 3.4e-07 57.8 59 42.4
SalBow7G1578 Salvia bowleyana HOM05D000430 ORTHO05D000305 4.5e-07 57.4 64 45.3
TAR365G1243 Trochodendron aralioides HOM05D000430 ORTHO05D000305 4.5e-07 57.4 61 44.3
HanXRQChr11g0329531 Helianthus annuus HOM05D000430 ORTHO05D000305 5.9e-07 57.0 60 48.3
MSTRG.12297 Avicennia marina HOM05D000430 ORTHO05D000305 7.7e-07 56.6 59 40.7
Ciclev10004870m.g Citrus clementina HOM05D000430 ORTHO05D000305 7.7e-07 56.6 59 44.1
CsaV3_1G033850 Cucumis sativus L. HOM05D000430 ORTHO05D000305 7.7e-07 56.6 58 43.1
Lsat_1_v5_gn_2_39501 Lactuca sativa HOM05D000430 ORTHO05D000305 7.7e-07 56.6 61 41.0
SalBow7G4366 Salvia bowleyana HOM05D000430 ORTHO05D000305 7.7e-07 56.6 64 45.3
arahy.Tifrunner.gnm1.ann1.ZT5PYH Arachis hypogaea HOM05D000430 ORTHO05D000305 1.0e-06 56.2 58 43.1
Ciclev10015168m.g Citrus clementina HOM05D000430 ORTHO05D000305 1.0e-06 56.2 58 43.1
Migut.M00342 Erythranthe guttata HOM05D000430 ORTHO05D000305 1.0e-06 56.2 60 41.7
Glyma.13G302700 Glycine max HOM05D000430 ORTHO05D000305 1.0e-06 56.2 58 46.6
HanXRQChr17g0554261 Helianthus annuus HOM05D000430 ORTHO05D000305 1.0e-06 56.2 59 42.4
Haze_13067 Corylus avellana HOM05D000430 ORTHO05D000305 1.3e-06 55.8 59 45.8
Duzib151G0271 Durio zibethinus HOM05D000430 ORTHO05D000305 1.3e-06 55.8 61 37.7
ECA248G3875 Erigeron canadensis HOM05D000430 ORTHO05D000305 1.3e-06 55.8 60 43.3
Sed0020455 Sechium edule HOM05D000430 ORTHO05D000305 1.3e-06 55.8 62 48.4
ECA233G0886 Erigeron canadensis HOM05D000430 ORTHO05D000305 1.7e-06 55.5 59 37.3
Glyma.19G039300 Glycine max HOM05D000430 ORTHO05D000305 1.7e-06 55.5 58 43.1
Lsat_1_v5_gn_2_39521 Lactuca sativa HOM05D000430 ORTHO05D000305 1.7e-06 55.5 61 42.6
VMungo1080G1885 Vigna mungo HOM05D000430 ORTHO05D000305 1.7e-06 55.5 57 43.9
arahy.Tifrunner.gnm1.ann1.DAH46G Arachis hypogaea HOM05D000430 ORTHO05D000305 2.2e-06 55.1 58 43.1
arahy.Tifrunner.gnm1.ann1.HR99RL Arachis hypogaea HOM05D000430 ORTHO05D000305 2.2e-06 55.1 59 47.5
Cfa014523 Carpinus fangiana HOM05D000430 ORTHO05D000305 2.2e-06 55.1 59 47.5
COL.COLO4_32494 Corchorus olitorius HOM05D000430 ORTHO05D000305 2.2e-06 55.1 58 41.4
HanXRQChr17g0555931 Helianthus annuus HOM05D000430 ORTHO05D000305 2.2e-06 55.1 59 40.7
Lsat_1_v5_gn_8_130860 Lactuca sativa HOM05D000430 ORTHO05D000305 2.2e-06 55.1 59 40.7
SalBow7G2258 Salvia bowleyana HOM05D000430 ORTHO05D000305 2.2e-06 55.1 61 42.6
Sed0021854 Sechium edule HOM05D000430 ORTHO05D000305 2.2e-06 55.1 59 40.7
Aqoxy1G02712 Aquilegia oxysepala HOM05D000430 ORTHO05D000305 2.9e-06 54.7 58 41.4
Aqoxy220s001 Aquilegia oxysepala HOM05D000430 ORTHO05D000305 2.9e-06 54.7 58 41.4
DCAR_021219 Daucus carota HOM05D000430 ORTHO05D000305 2.9e-06 54.7 58 37.9
DCAR_021222 Daucus carota HOM05D000430 ORTHO05D000305 2.9e-06 54.7 58 37.9
HanXRQChr17g0555531 Helianthus annuus HOM05D000430 ORTHO05D000305 2.9e-06 54.7 60 43.3
Medtr7g013850 Medicago truncatula HOM05D000430 ORTHO05D000305 2.9e-06 54.7 59 47.5
TAR365G0136 Trochodendron aralioides HOM05D000430 ORTHO05D000305 2.9e-06 54.7 61 42.6
Aqoxy3G03692 Aquilegia oxysepala HOM05D000430 ORTHO05D000305 3.8e-06 54.3 58 37.9
Cfa014519 Carpinus fangiana HOM05D000430 ORTHO05D000305 3.8e-06 54.3 59 47.5
CsaV3_3G020720 Cucumis sativus L. HOM05D000430 ORTHO05D000305 3.8e-06 54.3 53 45.3
ECA240G3562 Erigeron canadensis HOM05D000430 ORTHO05D000305 3.8e-06 54.3 60 43.3
Lj2g0011703 Lotus japonicus HOM05D000430 ORTHO05D000305 3.8e-06 54.3 60 46.7
Nn4g24894 Nelumbo nucifera HOM05D000430 ORTHO05D000305 3.8e-06 54.3 60 40.0
Cc05_g06030 Coffea canephora HOM05D000430 ORTHO05D000305 5.0e-06 53.9 60 38.3
Haze_13063 Corylus avellana HOM05D000430 ORTHO05D000305 5.0e-06 53.9 61 42.6
HanXRQChr02g0033251 Helianthus annuus HOM05D000430 ORTHO05D000305 5.0e-06 53.9 62 40.3
Potri.004G103100 Populus trichocarpa HOM05D000430 ORTHO05D000305 5.0e-06 53.9 58 46.6
Rhsim10G0050400 Rhododendron simsii HOM05D000430 ORTHO05D000305 5.0e-06 53.9 61 42.6
Sabra17G0083700 Salix brachista HOM05D000430 ORTHO05D000305 5.0e-06 53.9 52 48.1
TAR626G1949 Trochodendron aralioides HOM05D000430 ORTHO05D000305 5.0e-06 53.9 58 44.8
CiPaw.04G055100 Carya illinoinensis HOM05D000430 ORTHO05D000305 6.5e-06 53.5 62 38.7
Migut.N03038 Erythranthe guttata HOM05D000430 ORTHO05D000305 6.5e-06 53.5 63 34.9
HanXRQChr17g0555571 Helianthus annuus HOM05D000430 ORTHO05D000305 6.5e-06 53.5 61 37.7
Manes.01G095400 Manihot esculenta HOM05D000430 ORTHO05D000305 6.5e-06 53.5 59 44.1
TWI32G1177 Tripterygium wilfordii HOM05D000430 ORTHO05D000305 6.5e-06 53.5 61 44.3
Aqoxy1G01597 Aquilegia oxysepala HOM05D000430 ORTHO05D000305 8.5e-06 53.1 58 39.7
CiPaw.04G055000 Carya illinoinensis HOM05D000430 ORTHO05D000305 8.5e-06 53.1 62 40.3
ClCG03G001740 Citrullus lanatus HOM05D000430 ORTHO05D000305 8.5e-06 53.1 61 41.0
MELO3C035293.2 Cucumis melo HOM05D000430 ORTHO05D000305 8.5e-06 53.1 58 39.7
Migut.M00353 Erythranthe guttata HOM05D000430 ORTHO05D000305 8.5e-06 53.1 64 40.6
Lj1g0022771 Lotus japonicus HOM05D000430 ORTHO05D000305 8.5e-06 53.1 59 45.8
Manes.01G095300 Manihot esculenta HOM05D000430 ORTHO05D000305 8.5e-06 53.1 59 44.1
Nn1g06016 Nelumbo nucifera HOM05D000430 ORTHO05D000305 8.5e-06 53.1 58 44.8
Psat5g268960 Pisum sativum HOM05D000430 ORTHO05D000305 8.5e-06 53.1 62 43.5
Potri.004G103200 Populus trichocarpa HOM05D000430 ORTHO05D000305 8.5e-06 53.1 58 46.6
Sabra16G0309300 Salix brachista HOM05D000430 ORTHO05D000305 8.5e-06 53.1 62 46.8
Sabra16G0309400 Salix brachista HOM05D000430 ORTHO05D000305 8.5e-06 53.1 62 46.8


User provided reference genes

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