Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 9.4e-198 693.3 356 100.0
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 9.1e-193 676.8 356 96.9
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 7.5e-187 657.1 356 94.4
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 1.1e-142 510.4 356 75.6
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.2e-131 473.8 358 71.8
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 7.9e-112 407.9 360 58.9
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 5.7e-110 401.7 360 59.7
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.5e-107 393.7 231 86.6
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.1e-102 377.5 255 72.2
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.0e-102 376.7 364 58.2
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 2.2e-101 373.2 216 88.0
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.1e-100 370.9 359 56.8
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 7.0e-100 368.2 364 57.4
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 3.5e-99 365.9 327 59.0
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 1.0e-98 364.4 353 56.1
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.3e-98 364.0 327 59.0
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.3e-98 364.0 310 61.9
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 2.9e-98 362.8 358 54.5
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.9e-97 360.1 407 50.9
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 4.2e-97 359.0 356 54.5
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 9.4e-97 357.8 287 62.4
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 2.7e-96 356.3 338 55.9
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 8.0e-96 354.8 356 54.2
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 1.0e-95 354.4 356 53.9
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.7e-95 351.7 293 61.8
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.1e-94 350.9 361 54.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.1e-94 350.9 288 61.8
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 2.0e-94 350.1 292 64.4
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.3e-94 349.4 293 60.8
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 3.3e-94 349.4 256 66.8
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 4.4e-94 349.0 293 61.8
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 5.7e-94 348.6 341 54.3
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 5.7e-94 348.6 288 60.1
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 2.2e-93 346.7 268 64.6
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 3.7e-93 345.9 287 58.5
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 3.7e-93 345.9 320 55.6
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 6.3e-93 345.1 270 65.2
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 8.2e-93 344.7 337 54.0
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 8.2e-93 344.7 327 55.4
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.4e-92 344.0 356 52.5
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 1.4e-92 344.0 359 53.8
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.1e-92 342.8 356 52.5
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 4.1e-92 342.4 279 62.0
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.1e-92 342.4 356 52.5
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 7.0e-92 341.7 270 63.3
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 9.1e-92 341.3 356 52.5
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.7e-91 339.7 282 61.7
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 3.5e-91 339.3 333 56.5
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 4.5e-91 339.0 282 61.7
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 4.5e-91 339.0 356 53.1
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 7.7e-91 338.2 278 60.8
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 7.7e-91 338.2 303 56.8
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 2.2e-90 336.7 278 59.7
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 2.2e-90 336.7 278 61.5
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 2.9e-90 336.3 283 59.7
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 2.9e-90 336.3 292 58.2
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 5.0e-90 335.5 331 55.6
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 6.5e-90 335.1 280 60.7
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 6.5e-90 335.1 356 52.0
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 6.5e-90 335.1 290 61.0
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 8.5e-90 334.7 282 59.9
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 8.5e-90 334.7 281 60.1
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.9e-89 333.6 293 61.1
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 2.5e-89 333.2 331 55.3
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 3.2e-89 332.8 265 61.1
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 3.2e-89 332.8 355 51.8
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 3.2e-89 332.8 366 51.6
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 4.2e-89 332.4 282 59.6
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 4.2e-89 332.4 336 52.1
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 5.5e-89 332.0 295 59.0
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 9.4e-89 331.3 278 59.7
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 2.7e-88 329.7 282 58.2
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 2.7e-88 329.7 322 55.3
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 3.6e-88 329.3 373 50.9
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 3.6e-88 329.3 262 61.8
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.0e-87 327.8 268 60.4
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 3.0e-87 326.2 338 54.1
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 3.0e-87 326.2 279 59.5
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 5.2e-87 325.5 303 55.1
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 6.8e-87 325.1 256 63.3
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-86 324.3 293 58.0
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.6e-86 323.2 372 49.7
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 5.7e-86 322.0 352 52.0
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 9.8e-86 321.2 280 58.6
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.2e-85 320.1 288 56.9
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 2.2e-85 320.1 293 55.6
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.8e-85 318.9 271 60.9
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.8e-84 317.0 357 51.3
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.6e-83 313.9 281 58.0
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 2.7e-83 313.2 299 56.5
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 3.5e-83 312.8 269 59.9
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 3.5e-83 312.8 349 51.0
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 4.5e-83 312.4 291 55.3
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 1.3e-82 310.8 313 53.7
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 4.2e-81 305.8 271 58.3
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 4.7e-80 302.4 267 57.3
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 2.3e-79 300.1 273 52.7
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 4.0e-79 299.3 264 56.8
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 5.2e-79 298.9 259 57.5
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 9.8e-78 294.7 234 63.7
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 3.7e-77 292.7 276 56.2
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 2.9e-74 283.1 258 57.4
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.2e-70 271.2 259 54.1
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 8.6e-58 228.4 230 51.7
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 4.3e-49 199.5 226 49.6
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 3.5e-43 179.9 162 59.3
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 3.9e-34 149.8 139 58.3
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 8.7e-26 122.1 294 33.3
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 1.2e-19 101.7 285 29.8
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 5.6e-17 92.8 111 48.6
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.6e-16 91.3 75 61.3
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 2.7e-11 73.9 121 40.5
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.8e-10 71.2 98 41.8
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 6.3e-08 62.8 46 60.9
Mapoly0028s0045 Marchantia polymorpha HOM05D037891 ORTHO05D008297 1.5e-06 58.2 277 25.6
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 5.9e-06 56.2 277 25.3


User provided reference genes

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