Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.4e-215 752.7 391 100.0
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 2.2e-208 728.8 382 99.2
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.3e-192 676.4 445 82.5
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 4.0e-189 664.8 382 86.9
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 7.7e-185 650.6 383 85.4
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.0e-180 636.0 382 85.1
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 8.3e-179 630.6 383 83.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 2.0e-153 546.2 322 82.0
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 2.7e-153 545.8 324 81.5
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 4.6e-153 545.0 324 82.7
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 1.9e-151 539.7 322 79.8
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 4.3e-151 538.5 321 80.7
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 9.5e-151 537.3 322 80.1
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 9.5e-151 537.3 322 79.5
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 1.2e-150 537.0 320 80.9
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 8.1e-150 534.3 323 78.0
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 5.2e-149 531.6 320 79.1
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.5e-148 530.0 327 77.4
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 2.6e-148 529.3 394 69.8
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 7.5e-148 527.7 322 77.6
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 1.3e-147 526.9 322 77.6
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 6.4e-147 524.6 323 78.3
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.1e-146 523.9 323 78.6
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.4e-146 523.5 323 78.3
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 2.4e-146 522.7 331 77.0
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 2.1e-145 519.6 324 77.2
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 6.0e-145 518.1 322 78.0
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 3.0e-144 515.8 324 76.5
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 8.6e-144 514.2 322 75.5
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 1.9e-143 513.1 323 75.9
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 3.3e-143 512.3 320 75.9
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.1e-142 509.6 320 76.2
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 4.7e-142 508.4 362 69.1
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 6.2e-142 508.1 320 74.7
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 8.1e-142 507.7 320 75.6
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 3.1e-141 505.8 320 76.2
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 2.6e-140 502.7 320 74.7
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 2.6e-140 502.7 320 75.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 7.6e-140 501.1 320 72.8
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.3e-139 500.4 324 74.1
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 2.9e-139 499.2 322 75.2
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.7e-139 498.8 322 73.6
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 6.4e-139 498.0 320 73.8
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 1.1e-138 497.3 325 73.2
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 7.1e-138 494.6 321 74.1
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.6e-137 493.4 440 60.2
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.1e-137 493.0 321 73.8
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 2.1e-137 493.0 321 73.8
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.3e-136 490.3 320 71.9
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 3.0e-136 489.2 319 71.5
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 6.6e-136 488.0 320 72.2
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.5e-135 486.1 321 71.3
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 1.2e-134 483.8 325 71.4
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.6e-134 483.4 328 71.0
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 4.7e-134 481.9 320 70.3
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 3.4e-132 475.7 323 71.2
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 4.9e-131 471.9 331 69.2
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 4.6e-129 465.3 279 80.6
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.0e-128 464.2 324 71.9
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 4.3e-127 458.8 342 68.1
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 3.6e-126 455.7 338 68.3
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.7e-123 446.8 330 68.5
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 1.7e-120 436.8 266 78.6
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 4.8e-118 428.7 259 79.5
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 4.0e-117 425.6 271 74.2
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.7e-113 412.9 322 61.5
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.9e-112 409.1 360 59.2
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 7.4e-111 404.8 277 69.7
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 2.1e-110 403.3 325 60.3
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.4e-109 399.8 267 70.8
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 1.1e-103 380.9 290 64.5
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.1e-103 380.9 318 56.9
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 3.5e-97 359.4 320 61.2
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 9.0e-93 344.7 277 63.5
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 2.3e-88 330.1 321 56.7
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 1.8e-85 320.5 226 71.2
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.6e-79 300.1 327 45.6
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 1.1e-74 284.6 317 45.1
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.9e-74 283.9 204 63.2
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.2e-74 282.7 321 45.8
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.6e-73 280.8 182 73.6
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.0e-72 276.6 176 75.6
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 6.7e-72 275.4 233 59.2
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 4.1e-69 266.2 200 65.5
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 9.1e-69 265.0 396 39.1
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 9.1e-69 265.0 211 62.6
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 2.2e-62 243.8 261 51.3
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 6.3e-62 242.3 249 51.4
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.2e-60 238.0 220 54.1
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 5.9e-60 235.7 335 39.4
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 2.9e-59 233.4 252 49.6
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.8e-53 214.2 305 38.7
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.4e-53 213.8 305 38.4
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 2.5e-50 203.8 314 39.8
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.5e-50 203.8 321 36.1
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.6e-49 201.1 307 37.5
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 4.7e-49 199.5 120 80.0
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 8.0e-49 198.7 330 36.1
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 1.6e-44 184.5 141 63.8
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 8.9e-40 168.7 203 46.8
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 4.4e-39 166.4 93 82.8
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 9.8e-39 165.2 98 76.5
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 8.3e-38 162.2 318 30.5
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 5.4e-37 159.5 104 69.2
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 9.2e-37 158.7 311 32.8
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 4.0e-32 143.3 138 52.9
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.3e-30 138.3 174 44.8
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.3e-30 138.3 142 52.8
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 2.4e-29 134.0 118 57.6
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 7.8e-20 102.4 56 89.3
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 3.9e-19 100.1 56 87.5
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 3.3e-18 97.1 250 27.6
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 5.6e-18 96.3 87 52.9
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 5.8e-15 86.3 238 25.6
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.9e-13 81.3 230 23.9
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 9.3e-13 79.0 236 25.4
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.6e-12 76.6 234 27.8
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 3.9e-11 73.6 132 37.9
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 8.7e-11 72.4 46 67.4
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 9.6e-10 68.9 43 67.4
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.3e-09 68.6 244 25.4
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.6e-09 68.2 55 54.5
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 7.6e-07 59.3 169 32.0
Cre14.g624350 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 6.4e-06 56.2 104 33.7


User provided reference genes

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