Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 3.0e-99 365.5 236 100.0
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 1.4e-96 356.7 236 89.8
PGSC0003DMG400021282 Solanum tuberosum HOM05D009485 ORTHO05D006259 2.9e-70 269.2 209 84.7
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 3.0e-51 206.1 214 58.9
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.2e-47 194.1 220 64.5
CAN.G1191.3 Capsicum annuum HOM05D009485 ORTHO05D006259 2.3e-38 163.3 200 68.0
Nitab4.5_0001402g0020 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.9e-37 160.2 216 55.6
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 8.9e-35 151.4 238 52.1
Nitab4.5_0001675g0090 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.3e-25 120.9 238 47.9
Nitab4.5_0003934g0050 Nicotiana tabacum HOM05D009485 ORTHO05D006259 4.6e-23 112.5 227 47.1
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 3.0e-22 109.8 240 35.4
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 6.2e-20 102.1 234 40.6
Sopen07g029750 Solanum pennellii HOM05D009485 ORTHO05D006259 1.1e-19 101.3 220 45.5
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 2.6e-18 96.7 234 37.2
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 5.8e-18 95.5 238 42.9
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.2e-16 89.7 149 44.3
SGA_v2.0_scaffold130G34364 Striga asiatica HOM05D009485 ORTHO05D006259 7.1e-16 88.6 111 47.7
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 2.1e-15 87.0 193 36.3
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 1.0e-14 84.7 126 43.7
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.9e-13 80.5 123 43.1
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 2.5e-13 80.1 142 38.7
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 1.6e-12 77.4 234 32.9
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 3.6e-12 76.3 86 51.2
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 4.7e-12 75.9 118 45.8
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 1.2e-10 71.2 141 35.5
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 1.5e-10 70.9 130 39.2
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 2.0e-10 70.5 140 37.9
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.4e-10 69.7 192 33.3
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.4e-10 69.7 192 33.3
unitig_46.g18281 Utricularia gibba HOM05D009485 ORTHO05D006259 3.4e-10 69.7 134 38.1
Solyc07g056370.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 2.2e-09 67.0 223 38.6
Oeu020927.1 Olea europaea HOM05D009485 ORTHO05D006259 4.9e-09 65.9 122 38.5
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 4.1e-08 62.8 163 33.7
unitig_747.g21610 Utricularia gibba HOM05D009485 ORTHO05D006259 9.2e-08 61.6 238 26.9
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.6e-07 60.8 157 31.8
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 7.8e-07 58.5 88 43.2
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 1.3e-06 57.8 157 31.8
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.7e-06 57.4 151 31.1
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 2.3e-06 57.0 244 27.5
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 3.0e-06 56.6 157 38.9
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 5.1e-06 55.8 244 27.5
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.1e-06 55.8 104 40.4
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 6.6e-06 55.5 87 37.9
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 6.6e-06 55.5 71 49.3
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 8.6e-06 55.1 143 34.3


User provided reference genes

Program Settings