Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.1e-99 366.7 192 100.0
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.5e-77 293.1 163 96.3
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 3.4e-77 292.0 162 95.1
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.3e-63 246.9 166 83.1
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 6.9e-54 214.5 166 75.9
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 7.2e-51 204.5 158 76.6
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.6e-45 186.0 169 67.5
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 5.7e-40 168.3 125 72.8
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 2.2e-39 166.4 99 81.8
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.8e-39 166.0 109 74.3
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.3e-38 161.8 109 72.5
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 5.3e-38 161.8 105 74.3
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.2e-37 160.6 122 68.9
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 2.6e-37 159.5 116 71.6
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.5e-37 159.1 109 72.5
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 3.5e-37 159.1 106 75.5
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 5.9e-37 158.3 97 78.4
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 5.9e-37 158.3 138 64.5
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 5.9e-37 158.3 104 75.0
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 7.7e-37 157.9 126 65.9
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.0e-36 157.5 114 67.5
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.0e-36 157.5 95 78.9
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 1.3e-36 157.1 97 77.3
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.3e-36 157.1 99 76.8
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.3e-36 157.1 99 76.8
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 2.9e-36 156.0 99 75.8
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 3.8e-36 155.6 119 65.5
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 3.8e-36 155.6 96 78.1
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 5.0e-36 155.2 112 70.5
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 5.0e-36 155.2 157 54.8
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 6.5e-36 154.8 156 56.4
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 8.5e-36 154.5 137 62.0
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.1e-35 154.1 96 77.1
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.1e-35 154.1 96 77.1
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.5e-35 153.7 96 77.1
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.5e-35 153.7 96 77.1
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.9e-35 153.3 96 76.0
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.9e-35 153.3 96 76.0
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 2.5e-35 152.9 120 66.7
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.5e-35 152.9 95 77.9
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 2.5e-35 152.9 96 76.0
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.5e-35 152.9 123 64.2
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 3.2e-35 152.5 93 77.4
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 3.2e-35 152.5 123 65.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 3.2e-35 152.5 130 62.3
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 3.2e-35 152.5 98 74.5
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 4.2e-35 152.1 111 69.4
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 5.5e-35 151.8 96 76.0
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 5.5e-35 151.8 122 63.9
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 5.5e-35 151.8 95 75.8
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 7.2e-35 151.4 119 66.4
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 7.2e-35 151.4 159 54.1
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 7.2e-35 151.4 93 76.3
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 7.2e-35 151.4 93 76.3
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 9.4e-35 151.0 116 69.0
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 9.4e-35 151.0 96 75.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 9.4e-35 151.0 136 63.2
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 1.2e-34 150.6 130 63.1
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 1.6e-34 150.2 102 73.5
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 2.1e-34 149.8 159 52.8
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 2.1e-34 149.8 113 67.3
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.1e-34 149.8 120 65.0
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 2.7e-34 149.4 95 75.8
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 4.7e-34 148.7 93 74.2
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 4.7e-34 148.7 125 62.4
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 6.1e-34 148.3 99 71.7
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.4e-33 147.1 120 62.5
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.8e-33 146.7 121 62.0
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.8e-33 146.7 127 64.6
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.3e-33 146.4 123 63.4
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.3e-33 146.4 103 70.9
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.3e-33 146.4 103 70.9
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 2.3e-33 146.4 191 51.8
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 3.0e-33 146.0 134 56.0
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 3.0e-33 146.0 109 67.9
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.0e-33 145.6 123 63.4
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 5.2e-33 145.2 102 69.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 6.7e-33 144.8 123 62.6
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 6.7e-33 144.8 123 62.6
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.8e-33 144.4 123 62.6
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.8e-33 144.4 122 63.9
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.8e-33 144.4 122 63.9
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 2.6e-32 142.9 101 70.3
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 7.5e-32 141.4 98 69.4
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 4.1e-30 135.6 116 62.1
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 5.3e-30 135.2 93 67.7
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.7e-28 130.2 98 65.3
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 2.2e-28 129.8 80 77.5
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 9.4e-27 124.4 116 56.9
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.2e-26 124.0 71 80.3
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 1.3e-23 114.0 64 82.8
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 6.3e-23 111.7 103 55.3
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 1.4e-22 110.5 130 51.5
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 4.1e-22 109.0 93 61.3
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 1.2e-21 107.5 75 69.3
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.6e-21 107.1 75 69.3
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 5.9e-21 105.1 63 76.2
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.7e-21 104.8 62 75.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 4.2e-19 99.0 62 72.6


User provided reference genes

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