Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g007190.2 Solanum lycopersicum HOM05D013449 ORTHO05D015621 7.6e-183 643.7 315 100.0
Sopen10g003290 Solanum pennellii HOM05D013449 ORTHO05D015621 4.2e-181 637.9 315 98.7
PGSC0003DMG400021271 Solanum tuberosum HOM05D013449 ORTHO05D015621 6.2e-177 624.0 315 96.8
Nitab4.5_0002252g0050 Nicotiana tabacum HOM05D013449 ORTHO05D015621 2.2e-150 535.8 316 83.2
Nitab4.5_0000383g0220 Nicotiana tabacum HOM05D013449 ORTHO05D015621 1.4e-144 516.5 316 81.3
Peaxi162Scf00027g00041 Petunia axillaris HOM05D013449 ORTHO05D015621 1.7e-134 483.0 287 81.9
Cc05_g11310 Coffea canephora HOM05D013449 ORTHO05D015621 6.8e-91 338.2 280 59.6
Migut.H01983 Erythranthe guttata HOM05D013449 ORTHO05D015621 7.1e-64 248.4 285 47.0
SGA_v2.0_scaffold130G34308 Striga asiatica HOM05D013449 ORTHO05D015621 1.2e-58 231.1 267 47.6
Oeu051120.1 Olea europaea HOM05D013449 ORTHO05D015621 1.0e-25 121.7 105 60.0
Hma1.2p1_0321F.1_g124180 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.0e-22 111.7 126 44.4
Hma1.2p1_0915F.1_g236340 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.2e-20 104.0 128 39.8
PGR119G1573 Punica granatum HOM05D013449 ORTHO05D015621 1.3e-17 94.7 68 60.3
Rhsim04G0000200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-16 91.7 108 43.5
Rhsim04G0001200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-16 91.7 108 43.5
HPP92_003916 Vanilla planifolia HOM05D000030 ORTHO05D000009 7.7e-10 68.9 109 40.4
Dinv10810 Davidia involucrata HOM05D000030 ORTHO05D000009 6.5e-09 65.9 97 37.1
Thecc.04G172000 Theobroma cacao HOM05D000030 ORTHO05D010590 3.2e-08 63.5 106 34.9
Gohir.A02G010901 Gossypium hirsutum HOM05D000030 ORTHO05D010590 4.2e-08 63.2 112 35.7
ECA232G4030 Erigeron canadensis HOM05D000030 ORTHO05D000009 7.2e-08 62.4 93 37.6
Gorai.005G014600 Gossypium raimondii HOM05D000030 ORTHO05D010590 9.4e-08 62.0 106 36.8
Duzib151G0422 Durio zibethinus HOM05D000030 ORTHO05D010590 1.2e-07 61.6 116 33.6
Cc04_g04520 Coffea canephora HOM05D000030 ORTHO05D000009 1.6e-07 61.2 131 35.9
Duzib151G0581 Durio zibethinus HOM05D000030 ORTHO05D010590 1.6e-07 61.2 118 34.7
Gohir.A02G059433 Gossypium hirsutum HOM05D000030 ORTHO05D010590 1.6e-07 61.2 109 33.9
Gorai.005G013900 Gossypium raimondii HOM05D000030 ORTHO05D010590 1.6e-07 61.2 85 36.5
Rhsim08G0113700 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-07 61.2 118 33.1
Hma1.2p1_1093F.1_g256040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-07 60.8 115 33.0
Ca_08811_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 2.7e-07 60.5 118 33.9
Ciclev10025036m.g Citrus clementina HOM05D000030 ORTHO05D000009 3.6e-07 60.1 148 31.1
MELO3C031570.2 Cucumis melo HOM05D000030 ORTHO05D000009 4.7e-07 59.7 149 30.9
MELO3C032856.2 Cucumis melo HOM05D000030 ORTHO05D000009 4.7e-07 59.7 86 40.7
Gorai.013G077200 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.7e-07 59.7 138 32.6
Sp7g02205 Schrenkiella parvula HOM05D016771 ORTHO05D018807 6.1e-07 59.3 93 37.6
Hma1.2p1_0055F.1_g031250 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.0e-07 58.9 109 35.8
BraA06t24310Z Brassica rapa HOM05D000030 ORTHO05D000009 1.0e-06 58.5 115 37.4
CsaV3_2G003180 Cucumis sativus L. HOM05D000030 ORTHO05D000009 1.0e-06 58.5 149 30.9
CsaV3_4G001940 Cucumis sativus L. HOM05D000030 ORTHO05D000009 1.0e-06 58.5 79 41.8
Sed0004433 Sechium edule HOM05D000030 ORTHO05D000009 1.0e-06 58.5 80 42.5
SGA_v2.0_scaffold370G50130 Striga asiatica HOM05D000030 ORTHO05D000009 1.0e-06 58.5 88 39.8
HPP92_024324 Vanilla planifolia HOM05D013449 ORTHO05D015621 1.0e-06 58.5 58 43.1
QL10p012842 Quercus lobata HOM05D000306 ORTHO05D000410 1.4e-06 58.2 73 45.2
A06p11300 Brassica napus HOM05D000030 ORTHO05D000009 1.8e-06 57.8 113 37.2
ClCG11G003320 Citrullus lanatus HOM05D000030 ORTHO05D000009 1.8e-06 57.8 149 30.9
THA.LOC104800438 Tarenaya hassleriana HOM05D000030 ORTHO05D000009 1.8e-06 57.8 87 42.5
Gohir.D02G025101 Gossypium hirsutum HOM05D000030 ORTHO05D010590 2.3e-06 57.4 68 44.1
Hma1.2p1_0931F.1_g238120 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.3e-06 57.4 140 28.6
Os01g0698300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 2.3e-06 57.4 51 52.9
Sed0018973 Sechium edule HOM05D000030 ORTHO05D000009 3.0e-06 57.0 149 30.9
VMungo1080G0581 Vigna mungo HOM05D000030 ORTHO05D000009 3.0e-06 57.0 128 32.8
AL1G27390 Arabidopsis lyrata HOM05D000030 ORTHO05D000009 4.0e-06 56.6 92 37.0
ClCG07G012220 Citrullus lanatus HOM05D000030 ORTHO05D000009 4.0e-06 56.6 74 43.2
Duzib192G0387 Durio zibethinus HOM05D000030 ORTHO05D000009 4.0e-06 56.6 117 32.5
Hma1.2p1_0346F.1_g131560 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.0e-06 56.6 114 29.8
SHI07178 Sapria himalayana HOM05D000105 ORTHO05D000009 4.0e-06 56.6 107 34.6
SHI12385 Sapria himalayana HOM05D000030 ORTHO05D000009 4.0e-06 56.6 107 34.6
SHI38150 Sapria himalayana HOM05D000030 ORTHO05D000009 4.0e-06 56.6 107 34.6
Ca_01049_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 5.2e-06 56.2 124 34.7
Gohir.D02G011866 Gossypium hirsutum HOM05D000030 ORTHO05D010590 5.2e-06 56.2 87 36.8
Gorai.005G031000 Gossypium raimondii HOM05D000030 ORTHO05D010590 5.2e-06 56.2 68 42.6
HanXRQChr16g0500341 Helianthus annuus HOM05D000030 ORTHO05D000009 5.2e-06 56.2 99 33.3
Hma1.2p1_0485F.1_g163040 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 5.2e-06 56.2 108 35.2
Hma1.2p1_2511F.1_g323600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.2e-06 56.2 109 38.5
Lj3g0008697 Lotus japonicus HOM05D000030 ORTHO05D000009 5.2e-06 56.2 109 35.8
Gohir.D12G114350 Gossypium hirsutum HOM05D000030 ORTHO05D000009 6.8e-06 55.8 92 37.0
Hma1.2p1_0314F.1_g121830 Hydrangea macrophylla HOM05D000030 ORTHO05D000031 6.8e-06 55.8 108 35.2
Sabra18G0107300 Salix brachista HOM05D000030 ORTHO05D000009 6.8e-06 55.8 94 34.0
Gohir.D01G209133 Gossypium hirsutum HOM05D000030 ORTHO05D000009 8.8e-06 55.5 73 39.7
Gohir.D02G011150 Gossypium hirsutum HOM05D000030 ORTHO05D010590 8.8e-06 55.5 81 37.0
RcHm_v2.0_Chr2g0134951 Rosa chinensis HOM05D000030 ORTHO05D000009 8.8e-06 55.5 142 31.0


User provided reference genes

Program Settings