Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g006430.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 4.9e-42 174.1 90 100.0
Sopen10g002380 Solanum pennellii HOM05D002846 ORTHO05D002692 2.4e-41 171.8 90 98.9
PGSC0003DMG400014397 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.0e-39 166.4 90 96.7
Nitab4.5_0002229g0220 Nicotiana tabacum HOM05D002846 ORTHO05D002692 5.8e-27 124.0 82 82.9
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 6.6e-23 110.5 88 72.7
Nitab4.5_0002342g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 9.6e-14 80.1 59 78.0
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 6.9e-12 73.9 87 54.0
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 6.9e-12 73.9 81 51.9
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 1.4e-09 66.2 79 50.6
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 2.4e-09 65.5 85 49.4
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 3.2e-09 65.1 87 49.4
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 5.4e-09 64.3 92 47.8
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 9.3e-09 63.5 84 48.8
Nitab4.5_0003509g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.2e-08 63.2 83 47.0
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.2e-08 63.2 88 52.3
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.6e-08 62.8 81 51.9
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.5e-08 61.6 80 51.2
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 3.5e-08 61.6 80 51.2
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 4.6e-08 61.2 80 50.0
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 4.6e-08 61.2 82 47.6
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 4.6e-08 61.2 85 49.4
PSO210G5289 Papaver somniferum HOM05D002846 ORTHO05D002692 1.0e-07 60.1 88 47.7
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 1.3e-07 59.7 86 46.5
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 2.3e-07 58.9 97 47.4
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 3.0e-07 58.5 91 45.1
AUR62008775 Chenopodium quinoa HOM05D002846 ORTHO05D002692 3.9e-07 58.2 86 45.3
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 3.9e-07 58.2 79 48.1
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 3.9e-07 58.2 81 50.6
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 5.1e-07 57.8 93 48.4
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 6.6e-07 57.4 79 45.6
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 6.6e-07 57.4 80 47.5
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 6.6e-07 57.4 81 45.7
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 8.7e-07 57.0 83 44.6
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 1.1e-06 56.6 82 48.8
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 1.5e-06 56.2 84 46.4
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 1.5e-06 56.2 83 47.0
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 1.5e-06 56.2 82 42.7
COL.COLO4_09606 Corchorus olitorius HOM05D002846 ORTHO05D002692 1.5e-06 56.2 80 48.8
Lj1A867G31 Lonicera japonica HOM05D002846 ORTHO05D002692 1.5e-06 56.2 82 46.3
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 1.9e-06 55.8 82 42.7
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 1.9e-06 55.8 83 47.0
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 1.9e-06 55.8 93 45.2
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.9e-06 55.8 83 45.8
Atru.chr2.3239 Acer truncatum HOM05D002846 ORTHO05D002692 2.5e-06 55.5 88 43.2
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 2.5e-06 55.5 79 44.3
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 2.5e-06 55.5 95 43.2
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.3e-06 55.1 87 44.8
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 3.3e-06 55.1 90 42.2
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 5.6e-06 54.3 85 41.2
ClCG02G008550 Citrullus lanatus HOM05D002846 ORTHO05D002692 5.6e-06 54.3 81 44.4
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 5.6e-06 54.3 88 45.5
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 5.6e-06 54.3 87 44.8
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 5.6e-06 54.3 78 44.9
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 7.3e-06 53.9 79 44.3
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 9.6e-06 53.5 79 43.0


User provided reference genes

Program Settings