Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 8.6e-85 317.0 167 100.0
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.6e-83 312.8 167 98.8
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 5.8e-81 304.3 167 95.8
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.5e-52 209.1 167 68.9
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.2e-51 204.5 167 67.7
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 4.9e-48 194.9 167 65.3
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 1.6e-46 189.9 164 66.5
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.3e-45 186.8 164 61.6
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.8e-45 186.4 168 61.3
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 5.1e-45 184.9 168 60.7
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.3e-43 177.9 153 64.1
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.3e-42 174.9 164 60.4
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 6.9e-42 174.5 168 62.5
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.9e-40 169.1 168 60.7
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 1.1e-39 167.2 168 60.1
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.1e-39 167.2 167 59.3
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 5.5e-39 164.9 167 56.3
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 5.5e-39 164.9 168 60.1
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.7e-38 162.5 167 56.9
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.7e-38 162.5 167 56.9
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 9.7e-36 154.1 167 53.9
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 9.7e-36 154.1 167 52.7
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 1.7e-35 153.3 167 50.9
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 2.8e-35 152.5 165 54.5
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 6.3e-35 151.4 167 52.7
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 6.9e-34 147.9 164 51.2
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 9.1e-34 147.5 167 52.1
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 3.4e-33 145.6 167 53.3
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 4.5e-33 145.2 167 50.9
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 7.7e-33 144.4 168 52.4
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 1.3e-32 143.7 167 49.1
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.3e-32 143.7 167 50.3
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 3.8e-32 142.1 168 51.2
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 6.5e-32 141.4 167 52.7
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 5.5e-31 138.3 163 49.7
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 9.4e-31 137.5 168 51.2
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 9.4e-31 137.5 167 47.9
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.6e-30 136.7 168 50.6
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 2.1e-30 136.3 169 49.1
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 3.6e-30 135.6 167 50.3
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 7.9e-30 134.4 172 47.1
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 7.9e-30 134.4 166 48.2
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 7.9e-30 134.4 169 47.3
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.4e-29 133.7 168 50.0
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.4e-29 133.7 168 50.0
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 3.0e-29 132.5 172 47.1
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 3.9e-29 132.1 168 47.0
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.9e-29 132.1 168 49.4
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 3.9e-29 132.1 168 49.4
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 5.1e-29 131.7 163 47.9
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 5.1e-29 131.7 167 46.7
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 6.7e-29 131.3 167 48.5
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 8.8e-29 131.0 169 46.2
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 8.8e-29 131.0 175 48.0
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 8.8e-29 131.0 167 45.5
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.1e-28 130.6 167 46.1
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 1.1e-28 130.6 170 46.5
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.0e-28 129.8 167 47.9
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.0e-28 129.8 167 46.7
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 7.4e-28 127.9 170 45.9
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 9.7e-28 127.5 169 47.9
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 1.3e-27 127.1 169 45.6
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.8e-27 125.9 167 44.9
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 4.8e-27 125.2 175 46.9
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.1e-26 124.0 168 47.0
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 3.1e-26 122.5 167 49.1
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.2e-25 120.6 170 49.4
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 4.5e-25 118.6 177 44.1
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 7.7e-25 117.9 170 42.4
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 1.0e-24 117.5 175 43.4
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.3e-24 117.1 167 46.1
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.7e-24 116.7 168 45.2
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.7e-24 116.7 169 45.6
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 2.9e-24 115.9 165 40.6
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.9e-24 115.9 168 43.5
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 5.0e-24 115.2 171 49.7
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 8.5e-24 114.4 168 43.5
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 8.5e-24 114.4 138 51.4
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 1.9e-23 113.2 166 47.6
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 4.2e-23 112.1 179 42.5
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 4.2e-23 112.1 149 49.7
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.2e-22 110.5 178 44.9
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 1.2e-22 110.5 171 48.0
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 2.1e-22 109.8 167 45.5
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 2.1e-22 109.8 163 48.5
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 1.4e-21 107.1 163 46.0
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 3.9e-21 105.5 171 46.2
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.1e-20 104.0 175 41.1
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 2.0e-20 103.2 168 41.7
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 4.4e-20 102.1 167 39.5
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 7.4e-20 101.3 166 38.0
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 9.7e-20 100.9 163 42.3
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.7e-19 100.1 170 40.6
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.1e-18 97.4 166 38.0
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 2.4e-18 96.3 168 39.9
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 4.1e-18 95.5 164 37.8
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 4.1e-18 95.5 168 41.1
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 5.3e-18 95.1 188 39.4
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 5.3e-18 95.1 188 39.4
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 5.3e-18 95.1 188 39.4
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 5.3e-18 95.1 188 39.4
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 7.0e-18 94.7 168 39.9
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 2.0e-17 93.2 143 43.4
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 3.5e-17 92.4 207 36.7
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 5.9e-17 91.7 171 39.2
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 3.8e-16 89.0 211 36.0
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 3.8e-16 89.0 218 36.2
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 6.5e-16 88.2 188 37.2
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.5e-15 86.3 164 39.0
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.5e-15 86.3 161 40.4
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 4.2e-15 85.5 214 35.0
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.2e-15 84.7 162 38.9
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.2e-14 84.0 188 35.6
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 1.2e-14 84.0 181 38.7
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.8e-13 80.1 191 35.6
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 3.0e-13 79.3 173 38.7
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 5.2e-13 78.6 194 35.1
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 8.8e-13 77.8 155 36.8
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.5e-12 77.0 167 37.7
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 2.0e-12 76.6 152 38.8
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 3.3e-12 75.9 188 35.1
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 5.7e-12 75.1 162 42.0
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 3.7e-11 72.4 153 32.7
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 3.7e-11 72.4 166 30.7
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 1.8e-10 70.1 153 37.9
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 2.4e-10 69.7 157 35.7
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 3.1e-10 69.3 195 31.8
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 4.1e-10 68.9 151 36.4
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 5.3e-10 68.6 122 41.0
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.1e-06 56.6 165 31.5
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.7e-06 56.2 165 32.1
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 6.1e-06 55.1 160 32.5
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 8.0e-06 54.7 160 33.8
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 8.0e-06 54.7 67 43.3


User provided reference genes

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