Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.2e-144 516.5 265 100.0
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.4e-142 509.6 265 98.1
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 5.0e-135 484.6 265 93.6
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 3.5e-120 435.3 265 84.5
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.0e-119 433.7 269 85.1
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.4e-116 423.3 281 79.4
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 1.1e-102 377.1 265 74.7
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.0e-84 315.5 203 74.4
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 9.8e-83 310.8 195 74.9
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 4.9e-82 308.5 211 70.1
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 2.4e-81 306.2 202 71.8
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 3.5e-80 302.4 254 62.6
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 1.7e-79 300.1 247 63.6
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.0e-79 299.3 217 67.3
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 3.0e-79 299.3 247 61.9
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 6.6e-79 298.1 259 59.5
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.1e-78 297.4 246 63.0
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 4.3e-78 295.4 217 65.0
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 4.3e-78 295.4 251 59.0
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 9.5e-78 294.3 284 55.6
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 2.8e-77 292.7 248 60.5
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 2.8e-77 292.7 209 66.0
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 4.7e-77 292.0 218 66.1
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 8.0e-77 291.2 209 68.4
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 8.0e-77 291.2 209 68.4
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.4e-76 290.4 207 68.1
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 2.3e-76 289.7 210 66.7
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 4.0e-76 288.9 253 60.9
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.5e-75 287.0 248 57.7
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.5e-75 287.0 247 59.5
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 2.6e-75 286.2 243 58.8
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 3.4e-75 285.8 222 64.9
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 3.4e-75 285.8 252 59.5
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 4.4e-75 285.4 240 58.8
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 4.4e-75 285.4 223 64.1
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 4.4e-75 285.4 245 58.4
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 4.4e-75 285.4 268 56.0
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 5.8e-75 285.0 219 63.9
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 5.8e-75 285.0 282 55.7
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 1.7e-74 283.5 220 64.5
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.2e-74 283.1 230 59.1
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 2.9e-74 282.7 208 63.9
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 3.7e-74 282.3 254 56.3
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 4.9e-74 282.0 220 65.5
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 4.9e-74 282.0 257 56.8
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 8.3e-74 281.2 220 64.1
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.1e-73 280.8 220 64.1
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 2.4e-73 279.6 252 58.7
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 2.4e-73 279.6 247 58.3
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 3.2e-73 279.3 268 54.5
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 2.1e-72 276.6 222 63.5
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 3.5e-72 275.8 230 62.6
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 6.0e-72 275.0 222 62.6
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 6.0e-72 275.0 218 61.9
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 7.8e-72 274.6 217 58.1
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.7e-71 273.5 229 62.9
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 2.3e-71 273.1 222 62.2
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 5.1e-71 271.9 222 62.2
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 8.6e-71 271.2 261 52.9
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 6.2e-69 265.0 263 51.3
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 2.3e-68 263.1 222 59.0
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 2.3e-68 263.1 182 68.1
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.2e-67 260.8 256 52.7
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.3e-66 257.3 208 56.2
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 2.2e-66 256.5 182 66.5
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 6.4e-66 255.0 242 55.4
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.9e-65 253.4 229 53.7
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 5.4e-65 251.9 209 62.2
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.0e-63 246.1 285 48.1
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 5.1e-63 245.4 201 56.7
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.5e-62 243.8 200 61.5
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 5.6e-62 241.9 254 50.8
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 9.5e-62 241.1 229 54.1
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 2.8e-61 239.6 184 64.7
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 3.6e-61 239.2 226 54.9
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 4.7e-61 238.8 214 59.8
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.4e-60 237.3 275 48.7
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 3.4e-59 232.6 192 58.9
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 6.4e-58 228.4 141 76.6
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.3e-55 220.7 190 56.3
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.3e-55 219.9 229 52.4
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.3e-53 214.2 203 47.8
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 1.4e-52 210.7 197 51.3
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 3.1e-52 209.5 213 51.6
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 6.9e-52 208.4 141 70.2
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.0e-51 206.8 185 54.1
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 9.9e-51 204.5 183 58.5
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 3.2e-49 199.5 266 41.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 2.1e-48 196.8 273 41.8
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 4.8e-45 185.7 203 47.8
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.1e-39 165.6 110 68.2
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 5.1e-39 165.6 155 58.1
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 3.4e-35 152.9 206 38.8
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 3.9e-31 139.4 105 61.0
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 3.4e-27 126.3 146 44.5
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 4.5e-27 125.9 166 41.0
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 7.9e-24 115.2 102 58.8
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.3e-23 113.6 123 52.8
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 6.7e-23 112.1 130 46.2
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 7.4e-22 108.6 208 38.0
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 9.4e-17 91.7 202 33.2
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.5e-14 84.3 78 53.8
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.0e-10 71.6 82 41.5
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 3.2e-09 66.6 57 52.6
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 2.3e-07 60.5 41 68.3


User provided reference genes

Program Settings