Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g150140.1 Solanum lycopersicum HOM05D008774 ORTHO05D010951 1.2e-122 443.4 246 100.0
Sopen01g043080 Solanum pennellii HOM05D008774 ORTHO05D010951 6.3e-116 421.0 246 96.7
Sopen02g014140 Solanum pennellii HOM05D000034 ORTHO05D000037 6.3e-116 421.0 246 96.7
Sopen09g033840 Solanum pennellii HOM05D000034 ORTHO05D000037 6.3e-116 421.0 246 96.7
Sopen07g025790 Solanum pennellii HOM05D000034 ORTHO05D000037 1.1e-109 400.2 235 96.6
Solyc06g075675.1 Solanum lycopersicum HOM05D008774 ORTHO05D000277 5.7e-85 318.2 196 94.9
PGSC0003DMG400030270 Solanum tuberosum HOM05D008774 ORTHO05D010951 1.5e-77 293.5 222 80.2
Sopen07g022930 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-74 282.0 227 79.7
Solyc02g021067.1 Solanum lycopersicum HOM05D008774 ORTHO05D010951 6.6e-65 251.5 134 97.0
PGSC0003DMG400001885 Solanum tuberosum HOM05D008774 ORTHO05D010951 1.0e-57 227.6 245 49.0
PGSC0003DMG400030305 Solanum tuberosum HOM05D008774 ORTHO05D010951 1.0e-57 227.6 247 49.4
PGSC0003DMG400000959 Solanum tuberosum HOM05D008774 ORTHO05D010951 1.3e-49 200.7 267 49.1
Sopen12g016410 Solanum pennellii HOM05D008774 ORTHO05D010951 1.7e-44 183.7 259 50.6
PGSC0003DMG400006515 Solanum tuberosum HOM05D008774 ORTHO05D010951 2.9e-44 183.0 244 44.7
Sopen04g024020 Solanum pennellii HOM05D008774 ORTHO05D010951 1.2e-42 177.6 261 49.4
Sopen07g006940 Solanum pennellii HOM05D008774 ORTHO05D010951 8.6e-41 171.4 218 44.5
Sopen11g012500 Solanum pennellii HOM05D000014 ORTHO05D000016 3.1e-38 162.9 233 51.1
PGSC0003DMG400009232 Solanum tuberosum HOM05D008774 ORTHO05D010951 2.6e-37 159.8 119 89.1
Solyc04g014855.1 Solanum lycopersicum HOM05D008774 ORTHO05D000277 5.6e-32 142.1 78 89.7
PGSC0003DMG400027866 Solanum tuberosum HOM05D008774 ORTHO05D010951 2.4e-30 136.7 168 46.4
Sopen04g024540 Solanum pennellii HOM05D008774 ORTHO05D010951 3.1e-30 136.3 171 47.4
PGSC0003DMG400039808 Solanum tuberosum HOM05D008774 ORTHO05D010951 5.2e-30 135.6 201 39.8
Sopen11g025520 Solanum pennellii HOM05D008774 ORTHO05D010951 2.0e-29 133.7 210 52.4
CAN.G97.25 Capsicum annuum HOM05D000034 ORTHO05D000037 4.4e-29 132.5 228 45.6
PGSC0003DMG400017683 Solanum tuberosum HOM05D008774 ORTHO05D010951 7.6e-29 131.7 117 55.6
PGSC0003DMG400028596 Solanum tuberosum HOM05D008774 ORTHO05D010951 2.1e-26 123.6 92 71.7
PGSC0003DMG400038478 Solanum tuberosum HOM05D008774 ORTHO05D010951 6.6e-25 118.6 181 52.5
CAN.G327.2 Capsicum annuum HOM05D001287 ORTHO05D010951 5.6e-24 115.5 178 43.3
Sopen03g020690 Solanum pennellii HOM05D000004 ORTHO05D010951 4.8e-23 112.5 175 41.7
Sopen07g022940 Solanum pennellii HOM05D008774 ORTHO05D010951 1.8e-22 110.5 94 59.6
Solyc10g017753.1 Solanum lycopersicum HOM05D008774 ORTHO05D000277 5.3e-22 109.0 92 56.5
PGSC0003DMG400015750 Solanum tuberosum HOM05D008774 ORTHO05D010951 9.0e-22 108.2 156 41.7
Sopen12g008280 Solanum pennellii HOM05D008774 ORTHO05D010951 3.4e-21 106.3 181 40.3
PGSC0003DMG400024397 Solanum tuberosum HOM05D008774 ORTHO05D010951 8.4e-20 101.7 89 50.6
Sopen04g006990 Solanum pennellii HOM05D008774 ORTHO05D010951 2.3e-17 93.6 188 44.7
PGSC0003DMG400024758 Solanum tuberosum HOM05D008774 ORTHO05D010951 2.3e-17 93.6 49 89.8
Sopen04g023960 Solanum pennellii HOM05D008774 ORTHO05D010951 3.9e-17 92.8 68 61.8
Solyc04g051155.1 Solanum lycopersicum HOM05D008774 ORTHO05D000277 8.7e-17 91.7 103 50.5
CAN.G154.7 Capsicum annuum HOM05D004684 ORTHO05D010951 5.6e-16 89.0 198 34.8
Solyc05g044540.3 Solanum lycopersicum HOM05D008774 ORTHO05D010951 9.6e-16 88.2 68 63.2
PGSC0003DMG400016555 Solanum tuberosum HOM05D000034 ORTHO05D000277 4.8e-15 85.9 61 63.9
Sopen02g011400 Solanum pennellii HOM05D008774 ORTHO05D010951 1.1e-14 84.7 68 61.8
CAN.G176.22 Capsicum annuum HOM05D001348 ORTHO05D010969 2.6e-13 80.1 168 33.3
PGSC0003DMG400026800 Solanum tuberosum HOM05D008774 ORTHO05D010951 3.8e-12 76.3 88 42.0
Sopen00g014170 Solanum pennellii HOM05D008774 ORTHO05D010951 7.1e-11 72.0 36 77.8
Sopen08g011150 Solanum pennellii HOM05D008774 ORTHO05D010951 7.9e-10 68.6 42 76.2
CAN.G571.5 Capsicum annuum HOM05D008774 ORTHO05D010951 3.9e-09 66.2 87 41.4
SGA_v2.0_scaffold3145G54282 Striga asiatica HOM05D009666 ORTHO05D000277 5.1e-09 65.9 248 25.0
Sopen08g015710 Solanum pennellii HOM05D008774 ORTHO05D010951 8.7e-09 65.1 148 50.0
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 1.1e-08 64.7 248 24.6
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 2.5e-08 63.5 41 68.3
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 2.5e-08 63.5 41 68.3
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.3e-08 62.8 231 30.7
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 1.6e-07 60.8 43 62.8
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.1e-07 60.5 239 26.4
Dinv08467 Davidia involucrata HOM05D000034 ORTHO05D000277 6.2e-07 58.9 83 43.4
Dinv18323 Davidia involucrata HOM05D000034 ORTHO05D000277 6.2e-07 58.9 83 42.2
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 6.2e-07 58.9 41 65.9
Actinidia03627 Actinidia chinensis HOM05D000034 ORTHO05D000277 8.1e-07 58.5 44 59.1
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 8.1e-07 58.5 60 45.0
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 8.1e-07 58.5 60 45.0
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.1e-06 58.2 247 27.9
Dinv02446 Davidia involucrata HOM05D000034 ORTHO05D000277 1.1e-06 58.2 81 43.2
CAN.G1337.10 Capsicum annuum HOM05D008774 ORTHO05D010951 1.4e-06 57.8 211 27.5
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.8e-06 57.4 85 36.5
Dinv34343 Davidia involucrata HOM05D000034 ORTHO05D000277 1.8e-06 57.4 81 40.7
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.4 71 45.1
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.4 83 41.0
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-06 57.4 83 41.0
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.8e-06 57.4 74 44.6
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.8e-06 57.4 74 44.6
SGA_v2.0_scaffold154G37147 Striga asiatica HOM05D000034 ORTHO05D000277 2.4e-06 57.0 42 59.5
CSS0021233 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.1e-06 56.6 46 56.5
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 3.1e-06 56.6 42 61.9
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-06 56.2 46 56.5
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-06 56.2 46 56.5
CSS0013775 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.3e-06 55.8 77 39.0
SalBow2G2676 Salvia bowleyana HOM05D009908 ORTHO05D012008 5.3e-06 55.8 59 47.5
Actinidia06423 Actinidia chinensis HOM05D000034 ORTHO05D000277 6.9e-06 55.5 42 54.8
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.9e-06 55.5 83 39.8
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 6.9e-06 55.5 42 57.1


User provided reference genes

Program Settings