Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.8e-70 268.5 135 100.0
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 2.3e-56 222.2 114 97.4
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 6.8e-56 220.7 114 96.5
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.4e-55 218.0 114 94.7
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.3e-50 201.8 115 89.6
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 4.3e-50 201.4 115 89.6
CAN.G183.9 Capsicum annuum HOM05D002907 ORTHO05D005554 2.3e-40 169.1 131 63.4
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 4.0e-40 168.3 118 70.3
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 1.5e-39 166.4 113 72.6
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 2.0e-39 166.0 136 58.1
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.6e-39 165.6 115 70.4
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 2.6e-39 165.6 118 69.5
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.4e-39 164.9 117 68.4
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.9e-39 163.7 115 70.4
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 4.9e-38 161.4 115 69.6
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 3.2e-37 158.7 125 62.4
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 6.0e-36 154.5 112 67.0
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 6.0e-36 154.5 112 67.0
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.7e-35 152.9 107 69.2
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 1.5e-34 149.8 117 66.7
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.3e-34 147.5 106 67.9
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 9.6e-34 147.1 99 70.7
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 9.6e-34 147.1 105 68.6
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 2.8e-33 145.6 113 62.8
Peaxi162Scf00297g00049 Petunia axillaris HOM05D002907 ORTHO05D005554 2.8e-33 145.6 110 62.7
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 1.4e-32 143.3 114 62.3
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-30 136.7 118 62.7
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-30 136.7 118 62.7
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 2.9e-30 135.6 114 57.9
PGSC0003DMG400042496 Solanum tuberosum HOM05D002907 ORTHO05D005554 4.9e-30 134.8 114 57.0
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.1e-29 133.7 117 54.7
Nitab4.5_0000359g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.4e-29 132.5 120 57.5
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 2.4e-29 132.5 112 56.2
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 2.4e-29 132.5 112 56.2
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 2.1e-28 129.4 103 63.1
CANSAT25G3758 Cannabis sativa HOM05D002907 ORTHO05D005554 4.6e-28 128.3 104 60.6
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.6e-28 128.3 128 56.2
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.7e-27 124.0 112 53.6
Sopen10g024010 Solanum pennellii HOM05D002907 ORTHO05D005554 1.3e-25 120.2 110 53.6
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.8e-25 119.0 112 52.7
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.4e-24 116.7 112 52.7
Nitab4.5_0000051g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.8e-24 116.3 119 56.3
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 1.8e-24 116.3 105 54.3
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 2.4e-24 115.9 121 45.5
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 3.1e-24 115.5 75 76.0
DCAR_009226 Daucus carota HOM05D000033 ORTHO05D000913 1.2e-23 113.6 117 45.3
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 1.2e-23 113.6 119 48.7
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.2e-23 113.6 106 53.8
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-23 112.8 100 55.0
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 7.6e-23 110.9 131 42.0
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 9.9e-23 110.5 92 59.8
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 3.8e-22 108.6 78 65.4
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.4e-22 107.5 115 51.3
DCAR_015940 Daucus carota HOM05D002907 ORTHO05D005554 1.9e-21 106.3 110 43.6
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 1.9e-21 106.3 97 58.8
CAN.G1342.3 Capsicum annuum HOM05D001433 ORTHO05D005554 5.4e-21 104.8 124 47.6
Nitab4.5_0000037g0120 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.7e-20 102.4 75 69.3
DCAR_029864 Daucus carota HOM05D002907 ORTHO05D005554 3.9e-19 98.6 109 42.2
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 1.5e-18 96.7 109 43.1
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.5e-18 96.7 105 54.3
Solyc10g054270.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.6e-17 93.2 102 51.0
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.1e-17 90.9 99 53.5
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.1e-16 89.0 74 60.8
Sopen10g024140 Solanum pennellii HOM05D028602 ORTHO05D005554 2.9e-14 82.4 75 57.3
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 3.8e-14 82.0 46 80.4
Sopen10g024080 Solanum pennellii HOM05D028602 ORTHO05D005554 4.9e-14 81.6 75 57.3
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.1e-13 80.5 113 37.2
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-13 80.5 74 58.1
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.1e-13 80.5 42 97.6
Nitab4.5_0005521g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.4e-13 79.3 74 54.1
Nitab4.5_0001878g0070 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.1e-12 76.3 109 45.0
QL07p005779 Quercus lobata HOM05D002907 ORTHO05D005554 2.1e-12 76.3 109 38.5
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 2.1e-12 76.3 109 38.5
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 2.7e-12 75.9 109 36.7
Nitab4.5_0000488g0190 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.5e-12 75.5 103 44.7
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 1.8e-11 73.2 131 32.8
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-11 72.4 67 59.7
Solyc05g018860.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.9e-11 72.0 113 36.3
TWI79G1688 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 1.1e-10 70.5 106 35.8
Solyc02g014410.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.9e-10 69.7 74 44.6
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 2.5e-10 69.3 73 47.9
Aqoxy3G02886 Aquilegia oxysepala HOM05D003414 ORTHO05D003913 3.3e-10 68.9 103 42.7
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 3.3e-10 68.9 116 32.8
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 3.3e-10 68.9 116 32.8
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 4.3e-10 68.6 105 41.0
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 4.3e-10 68.6 105 41.0
CAN.G660.34 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-09 66.6 64 54.7
Sopen05g018840 Solanum pennellii HOM05D002907 ORTHO05D005554 2.1e-09 66.2 73 46.6
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.2e-09 64.7 100 40.0
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.2e-09 64.7 100 40.0
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 8.2e-09 64.3 103 37.9
Aqoxy5G02850 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 8.2e-09 64.3 103 38.8
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.8e-08 63.2 112 33.0
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.4e-08 62.8 62 54.8
DCAR_030300 Daucus carota HOM05D002907 ORTHO05D005554 3.1e-08 62.4 96 34.4
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 3.1e-08 62.4 96 34.4
Aqoxy1G02051 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 5.3e-08 61.6 103 36.9
Aqoxy4G01036 Aquilegia oxysepala HOM05D000100 ORTHO05D000052 5.3e-08 61.6 103 36.9
Aqoxy109s001 Aquilegia oxysepala HOM05D000494 ORTHO05D005554 1.2e-07 60.5 113 33.6
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.6e-07 59.3 102 34.3
Aqoxy2G00023 Aquilegia oxysepala HOM05D002907 ORTHO05D013727 3.4e-07 58.9 103 35.9
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 3.4e-07 58.9 108 28.7
CAN.G419.24 Capsicum annuum HOM05D002907 ORTHO05D005554 7.6e-07 57.8 43 65.1
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 1.7e-06 56.6 27 100.0
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.7e-06 56.6 109 32.1
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.7e-06 56.6 109 32.1
TWI53G0107 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.9e-06 55.8 57 45.6
Solyc11g044605.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.5e-06 54.7 27 96.3


User provided reference genes

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