Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g098300.3 Solanum lycopersicum HOM05D006534 ORTHO05D006434 8.5e-18 93.6 92 100.0
PGSC0003DMG400021608 Solanum tuberosum HOM05D006534 ORTHO05D006434 1.1e-12 76.6 79 93.7
Oeu013796.1 Olea europaea HOM05D006534 ORTHO05D006434 1.6e-11 72.8 93 86.0
TWI14G1419 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 3.5e-11 71.6 92 78.3
Thecc.02G118300 Theobroma cacao HOM05D006534 ORTHO05D006434 1.0e-10 70.1 93 81.7
TPR.G21131 Trifolium pratense HOM05D006534 ORTHO05D006434 1.3e-10 69.7 99 63.6
Potri.009G086900 Populus trichocarpa HOM05D006534 ORTHO05D006434 1.7e-10 69.3 98 75.5
Sc08g0004430 Simmondsia chinensis HOM05D006534 ORTHO05D006434 1.7e-10 69.3 93 71.0
Atru.chr5.2330 Acer truncatum HOM05D006534 ORTHO05D006434 3.8e-10 68.2 98 77.6
PGR042G3724 Punica granatum HOM05D006534 ORTHO05D006434 1.1e-09 66.6 94 77.7
CiPaw.06G165200 Carya illinoinensis HOM05D006534 ORTHO05D006434 1.5e-09 66.2 92 84.8
Peaxi162Scf00152g00528 Petunia axillaris HOM05D006534 ORTHO05D006434 3.3e-09 65.1 76 84.2
CiPaw.05G018800 Carya illinoinensis HOM05D006534 ORTHO05D006434 4.3e-09 64.7 93 76.3
Gohir.D02G203600 Gossypium hirsutum HOM05D006534 ORTHO05D006434 4.3e-09 64.7 92 88.0
Gorai.005G230700 Gossypium raimondii HOM05D006534 ORTHO05D006434 4.3e-09 64.7 92 88.0
TWI59G0168 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 5.6e-09 64.3 92 87.0
CSS0021262 Camellia sinensis var. sinensis HOM05D006534 ORTHO05D006434 9.5e-09 63.5 92 87.0
CSS0022822 Camellia sinensis var. sinensis HOM05D006534 ORTHO05D006434 9.5e-09 63.5 92 87.0
Duzib248G1096 Durio zibethinus HOM05D006534 ORTHO05D006434 2.1e-08 62.4 92 80.4
ClCG10G010140 Citrullus lanatus HOM05D006534 ORTHO05D006434 2.8e-08 62.0 93 76.3
CsaV3_4G000160 Cucumis sativus L. HOM05D006534 ORTHO05D006434 2.8e-08 62.0 93 74.2
Sed0015576 Sechium edule HOM05D006534 ORTHO05D006434 2.8e-08 62.0 99 68.7
HPP92_006071 Vanilla planifolia HOM05D006534 ORTHO05D006434 2.8e-08 62.0 92 75.0
Ah.01g007070 Amaranthus hybridus HOM05D006534 ORTHO05D006434 3.6e-08 61.6 104 60.6
Gohir.A03G181900 Gossypium hirsutum HOM05D006534 ORTHO05D006434 3.6e-08 61.6 92 87.0
Glyma.11G002000 Glycine max HOM05D006534 ORTHO05D006434 6.1e-08 60.8 105 65.7
CAN.G710.46 Capsicum annuum HOM05D012446 ORTHO05D015770 8.0e-08 60.5 76 81.6
Phvul.007G046300 Phaseolus vulgaris HOM05D006534 ORTHO05D006434 8.0e-08 60.5 95 74.7
Dinv42239 Davidia involucrata HOM05D006534 ORTHO05D006434 1.0e-07 60.1 94 70.2
Gorai.008G020000 Gossypium raimondii HOM05D006534 ORTHO05D006434 1.0e-07 60.1 93 78.5
Lalb_Chr02g0144951 Lupinus albus HOM05D006534 ORTHO05D006434 1.4e-07 59.7 92 62.0
Sed0014956 Sechium edule HOM05D006534 ORTHO05D006434 1.8e-07 59.3 94 69.1
Actinidia27993 Actinidia chinensis HOM05D006534 ORTHO05D006434 2.3e-07 58.9 96 85.4
Ca_02937_v3 Cicer arietinum L. HOM05D006534 ORTHO05D006434 3.0e-07 58.5 93 64.5
GSVIVG01037814001 Vitis vinifera HOM05D006534 ORTHO05D006434 4.0e-07 58.2 94 72.3
Ciclev10026875m.g Citrus clementina HOM05D006534 ORTHO05D006434 6.8e-07 57.4 92 53.3
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 8.9e-07 57.0 91 72.5
HPP92_007768 Vanilla planifolia HOM05D006534 ORTHO05D006434 8.9e-07 57.0 101 70.3
HPP92_007868 Vanilla planifolia HOM05D006534 ORTHO05D006434 8.9e-07 57.0 101 70.3
ATR0739G136 Amborella trichopoda HOM05D006534 ORTHO05D006434 1.5e-06 56.2 92 75.0
Cfa004668 Carpinus fangiana HOM05D006534 ORTHO05D006434 2.0e-06 55.8 98 78.6
AUR62030851 Chenopodium quinoa HOM05D006534 ORTHO05D006434 2.0e-06 55.8 99 80.8
Prupe.6G219500 Prunus persica HOM05D006534 ORTHO05D006434 2.0e-06 55.8 95 75.8
Sabra09G0066500 Salix brachista HOM05D006534 ORTHO05D006434 2.0e-06 55.8 82 81.7
GSVIVG01002630001 Vitis vinifera HOM05D006534 ORTHO05D006434 4.4e-06 54.7 92 63.0
FAN26G0795 Fragaria x ananassa HOM05D006534 ORTHO05D006434 5.7e-06 54.3 97 75.3
BraA04t18618Z Brassica rapa HOM05D019499 ORTHO05D006434 7.5e-06 53.9 92 82.6
Ca_22100_v3 Cicer arietinum L. HOM05D006534 ORTHO05D006434 7.5e-06 53.9 93 63.4
Migut.B00452 Erythranthe guttata HOM05D006534 ORTHO05D006434 9.8e-06 53.5 94 76.6


User provided reference genes

Program Settings