Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 2.4e-197 692.2 411 100.0
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 6.0e-188 661.0 402 96.5
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 7.6e-167 590.9 402 86.6
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.6e-140 503.4 411 74.9
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 8.2e-137 491.1 379 79.4
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 9.8e-122 441.0 411 68.9
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 1.6e-103 380.6 264 75.8
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.8e-91 340.5 413 55.4
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.3e-86 323.6 365 57.3
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 6.6e-86 322.0 397 56.7
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 1.1e-80 304.7 384 53.1
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 5.1e-78 295.8 404 51.2
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.1e-77 294.7 406 52.0
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.2e-76 291.2 351 55.6
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 2.8e-76 290.0 395 53.2
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 2.4e-75 287.0 422 52.6
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.4e-75 287.0 388 54.6
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 8.9e-75 285.0 338 57.1
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 1.5e-74 284.3 350 56.6
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 7.6e-74 282.0 412 50.7
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 7.6e-74 282.0 378 51.9
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.3e-73 281.2 381 54.3
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.1e-72 278.1 391 52.7
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.4e-72 277.7 383 52.5
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.4e-72 276.9 419 49.9
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 9.3e-72 275.0 351 55.6
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 2.7e-71 273.5 391 51.2
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 4.6e-71 272.7 412 51.2
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 6.0e-71 272.3 395 51.4
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.0e-70 271.6 393 51.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 3.0e-70 270.0 356 53.1
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 3.9e-70 269.6 382 52.1
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 3.9e-70 269.6 394 51.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.5e-69 267.7 399 51.6
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.5e-69 267.7 358 54.7
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 7.3e-69 265.4 302 51.3
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 1.3e-68 264.6 365 52.1
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.1e-68 263.8 279 55.2
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.8e-68 263.5 385 52.2
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 3.6e-68 263.1 379 52.0
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 6.2e-68 262.3 389 51.2
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 6.2e-68 262.3 421 47.3
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 8.1e-68 261.9 362 53.9
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 8.1e-68 261.9 279 54.8
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 5.3e-67 259.2 387 54.5
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 1.2e-66 258.1 277 52.7
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 9.9e-66 255.0 392 49.7
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.3e-65 254.6 301 50.5
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 6.4e-65 252.3 396 49.7
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 8.4e-65 251.9 450 45.8
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.1e-64 251.5 359 52.4
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.4e-64 251.1 400 51.5
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 2.4e-64 250.4 377 53.6
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.2e-64 250.0 379 53.8
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 3.2e-64 250.0 281 52.7
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 5.4e-64 249.2 377 53.8
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 6.0e-63 245.7 386 50.0
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.0e-62 245.0 386 50.5
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.7e-62 244.2 399 49.1
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 1.7e-62 244.2 278 52.2
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.3e-62 243.8 403 49.4
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 8.7e-62 241.9 214 59.8
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.1e-61 241.5 345 44.6
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 1.5e-61 241.1 383 52.2
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.5e-61 240.4 383 52.2
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 3.3e-61 240.0 240 55.8
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 4.3e-61 239.6 405 48.4
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 7.4e-61 238.8 395 48.9
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 7.4e-61 238.8 461 43.4
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.1e-60 237.3 335 52.2
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.6e-60 236.5 373 50.4
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.4e-59 234.6 406 47.5
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.8e-59 234.2 414 46.6
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 2.4e-59 233.8 392 47.2
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 3.1e-59 233.4 280 53.2
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 6.9e-59 232.3 334 53.9
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 9.0e-59 231.9 385 49.9
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.2e-58 231.5 181 64.6
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.2e-58 231.5 250 54.4
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 5.8e-58 229.2 388 48.5
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 9.9e-58 228.4 353 51.0
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 8.4e-57 225.3 244 51.2
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.9e-56 224.2 194 59.3
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 9.3e-56 221.9 395 48.1
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 2.1e-55 220.7 343 51.6
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 2.7e-55 220.3 393 48.3
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 6.0e-55 219.2 347 50.1
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 1.1e-53 214.9 291 44.7
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.3e-52 211.5 270 52.2
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.1e-52 210.7 183 61.7
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.4e-51 208.0 377 48.3
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 9.0e-51 205.3 194 56.2
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.5e-50 204.5 210 54.3
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.5e-50 204.5 207 53.1
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 3.4e-50 203.4 271 46.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 6.5e-49 199.1 413 42.9
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 8.4e-49 198.7 392 42.9
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 4.2e-48 196.4 371 48.2
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 7.1e-48 195.7 188 55.9
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.6e-47 194.5 281 44.1
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 6.3e-44 182.6 168 58.9
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.4e-43 181.4 214 50.5
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.7e-41 174.5 169 55.6
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.7e-41 174.5 206 46.6
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.0e-38 163.7 205 43.9
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.3e-37 160.2 273 41.8
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 3.3e-37 160.2 218 42.7
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 1.4e-35 154.8 315 34.6
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 2.9e-33 147.1 214 40.2
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 2.7e-31 140.6 263 51.3
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 1.9e-24 117.9 299 31.4
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 6.1e-23 112.8 174 43.1
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 6.5e-17 92.8 161 36.6
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.7e-15 87.4 60 76.7
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 6.1e-15 86.3 175 48.6
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.5e-08 65.1 49 67.3
PRCOL_00004793 Prasinoderma coloniale HOM05D002428 ORTHO05D008664 3.0e-06 57.4 159 28.9


User provided reference genes

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