Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 1.9e-75 285.8 150 100.0
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 3.6e-74 281.6 150 98.7
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 6.4e-71 270.8 150 94.7
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 4.9e-63 244.6 152 86.2
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 4.9e-63 244.6 152 86.2
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 3.3e-59 231.9 151 84.1
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 5.6e-59 231.1 152 84.2
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 8.4e-47 190.7 158 67.7
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 3.2e-46 188.7 121 79.3
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.2e-45 186.8 156 66.7
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 3.5e-45 185.3 157 68.8
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 7.8e-45 184.1 139 71.9
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 3.0e-44 182.2 121 77.7
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 5.1e-44 181.4 125 76.8
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 6.6e-44 181.0 155 67.7
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 4.3e-43 178.3 120 75.8
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 5.6e-43 177.9 150 66.0
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 5.6e-43 177.9 118 78.0
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 7.3e-43 177.6 119 78.2
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 9.6e-43 177.2 154 67.5
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 9.6e-43 177.2 129 76.7
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 9.6e-43 177.2 150 64.0
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 1.3e-42 176.8 123 75.6
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.3e-42 176.8 160 65.6
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 1.6e-42 176.4 155 63.9
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 2.8e-42 175.6 123 74.8
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 2.8e-42 175.6 134 70.9
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 3.6e-42 175.3 150 64.7
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 4.8e-42 174.9 121 76.0
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 4.8e-42 174.9 118 77.1
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 6.2e-42 174.5 150 63.3
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 8.1e-42 174.1 155 65.2
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 1.1e-41 173.7 123 74.0
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.4e-41 173.3 115 78.3
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 1.4e-41 173.3 115 78.3
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.8e-41 172.9 132 68.9
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 2.4e-41 172.6 123 73.2
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 2.4e-41 172.6 125 74.4
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 3.1e-41 172.2 117 78.6
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 3.1e-41 172.2 122 73.0
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 5.3e-41 171.4 116 77.6
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 6.9e-41 171.0 133 66.9
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 9.0e-41 170.6 123 72.4
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 1.5e-40 169.9 120 77.5
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 1.5e-40 169.9 157 60.5
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.6e-40 169.1 118 76.3
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 2.6e-40 169.1 118 76.3
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 2.6e-40 169.1 118 76.3
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 2.6e-40 169.1 158 63.9
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 2.6e-40 169.1 155 61.3
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 3.4e-40 168.7 118 76.3
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 4.5e-40 168.3 116 75.9
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 4.5e-40 168.3 118 74.6
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 4.5e-40 168.3 136 66.9
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 4.5e-40 168.3 119 77.3
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.5e-40 168.3 117 76.1
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 4.5e-40 168.3 140 70.7
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 5.8e-40 167.9 117 76.1
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 7.6e-40 167.5 118 74.6
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.6e-40 167.5 117 76.1
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 9.9e-40 167.2 119 74.8
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 9.9e-40 167.2 116 76.7
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 9.9e-40 167.2 145 65.5
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.3e-39 166.8 119 76.5
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 1.7e-39 166.4 151 64.2
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 2.2e-39 166.0 129 72.9
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 2.2e-39 166.0 118 73.7
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.9e-39 165.6 117 75.2
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 2.9e-39 165.6 131 71.0
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 2.9e-39 165.6 122 72.1
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 2.9e-39 165.6 117 76.1
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 2.9e-39 165.6 117 74.4
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 4.9e-39 164.9 119 73.9
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 4.9e-39 164.9 150 60.7
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 6.4e-39 164.5 129 69.8
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 8.4e-39 164.1 161 61.5
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 8.4e-39 164.1 120 75.8
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 8.4e-39 164.1 129 70.5
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 8.4e-39 164.1 116 74.1
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 1.1e-38 163.7 121 73.6
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 1.4e-38 163.3 127 70.1
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 1.4e-38 163.3 169 58.6
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 1.9e-38 162.9 130 70.8
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.4e-38 162.5 120 75.0
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.4e-38 162.5 120 75.0
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 2.4e-38 162.5 123 71.5
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 2.4e-38 162.5 120 75.0
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 3.2e-38 162.2 120 74.2
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 3.2e-38 162.2 120 75.0
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 3.2e-38 162.2 118 73.7
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 3.2e-38 162.2 115 73.9
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 5.4e-38 161.4 127 69.3
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 7.1e-38 161.0 118 72.9
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 9.3e-38 160.6 116 70.7
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.6e-37 159.8 127 69.3
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.1e-37 159.5 116 73.3
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 2.1e-37 159.5 118 71.2
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 2.7e-37 159.1 118 72.9
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 2.7e-37 159.1 122 69.7
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 4.6e-37 158.3 116 73.3
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 6.0e-37 157.9 116 69.0
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.0e-36 157.1 143 62.2
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 1.8e-36 156.4 111 73.9
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.3e-36 156.0 120 70.8
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 3.0e-36 155.6 118 70.3
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 5.1e-36 154.8 120 73.3
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.1e-35 153.7 121 72.7
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 3.3e-35 152.1 118 69.5
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 5.3e-33 144.8 119 65.5
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 1.2e-32 143.7 78 91.0
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 1.1e-30 137.1 115 67.0
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 1.4e-30 136.7 78 84.6
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 1.9e-30 136.3 115 65.2
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 2.3e-28 129.4 79 83.5
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 3.9e-28 128.6 82 78.0
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 6.7e-28 127.9 75 78.7
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 1.5e-27 126.7 115 56.5
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.6e-26 123.2 85 74.1
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.4e-25 119.4 106 60.4
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 4.0e-25 118.6 106 60.4
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 7.6e-24 114.4 117 52.1
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 5.1e-20 101.7 88 61.4
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 5.1e-20 101.7 75 64.0
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 1.1e-19 100.5 78 64.1
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 5.3e-17 91.7 92 52.2
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 6.5e-15 84.7 119 42.9
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 5.0e-07 58.5 65 47.7
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 6.5e-07 58.2 36 80.6


User provided reference genes

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