Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 6.8e-134 480.7 252 100.0
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 9.8e-133 476.9 252 98.8
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 1.1e-131 473.4 252 99.2
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 2.1e-130 469.2 252 96.4
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.3e-128 461.8 252 95.2
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 7.3e-128 460.7 252 95.2
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 4.7e-127 458.0 252 94.0
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 8.9e-118 427.2 254 87.4
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 86.9
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 86.1
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.1
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 5.8e-117 424.5 252 86.9
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 5.8e-117 424.5 252 86.1
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 85.7
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 84.1
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 86.1
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 2.9e-116 422.2 254 86.2
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 85.3
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 84.9
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 8.4e-116 420.6 252 84.9
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 84.9
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 1.9e-115 419.5 250 84.4
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 3.2e-115 418.7 250 83.6
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 85.7
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 5.4e-115 417.9 252 84.1
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 5.4e-115 417.9 252 85.7
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 7.1e-115 417.5 252 85.7
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 7.1e-115 417.5 252 83.3
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 7.1e-115 417.5 252 83.3
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.2e-114 416.8 253 86.2
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 84.5
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.2e-114 416.8 253 84.6
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 84.9
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 1.2e-114 416.8 251 83.3
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 85.3
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 84.1
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 84.1
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 84.1
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 3.5e-114 415.2 252 84.1
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 4.6e-114 414.8 252 83.3
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 84.5
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 83.3
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 6.0e-114 414.5 248 85.9
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 84.9
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 81.7
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 84.1
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 1.3e-113 413.3 252 85.3
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.3e-113 413.3 252 84.1
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 83.7
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 84.5
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 84.1
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 83.7
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 82.9
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 83.3
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 84.1
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 83.7
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 82.9
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 82.9
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 5.6e-112 407.9 252 81.7
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 9.6e-112 407.1 252 81.7
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 82.1
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 6.2e-111 404.4 252 82.5
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 8.1e-111 404.1 252 80.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 1.1e-110 403.7 252 81.3
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.4e-110 403.3 252 80.6
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.8e-110 402.9 252 81.0
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 1.8e-110 402.9 283 76.0
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 1.8e-110 402.9 253 80.6
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 3.1e-110 402.1 281 76.2
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 3.1e-110 402.1 256 80.9
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 5.3e-110 401.4 252 80.2
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 5.3e-110 401.4 252 81.0
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 5.3e-110 401.4 256 80.9
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 6.9e-110 401.0 252 81.7
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 1.2e-109 400.2 252 79.8
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.0e-109 399.4 252 82.5
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 81.7
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 3.4e-109 398.7 250 81.6
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 3.4e-109 398.7 254 81.5
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 5.8e-109 397.9 249 82.3
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 7.6e-109 397.5 249 82.3
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.7e-108 396.4 252 80.2
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 2.2e-108 396.0 260 78.5
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 2.2e-108 396.0 283 74.2
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 1.1e-107 393.7 249 81.9
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 7.1e-107 391.0 239 83.3
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 1.6e-106 389.8 259 79.2
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 1.7e-105 386.3 252 79.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 6.2e-103 377.9 256 75.4
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 4.5e-101 371.7 256 75.4
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.5e-98 362.1 272 72.8
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.3e-97 360.1 252 73.0
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 2.3e-97 359.4 221 83.7
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 3.3e-96 355.5 267 68.5
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 3.7e-95 352.1 252 71.8
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 1.2e-93 347.1 254 70.1
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 4.5e-93 345.1 252 71.0
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 8.4e-92 340.9 252 73.0
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.6e-90 336.7 255 71.8
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 5.8e-85 318.2 274 67.2
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 6.0e-82 308.1 190 81.6
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 3.9e-81 305.4 191 82.7
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.3e-79 300.4 176 85.8
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 1.6e-79 300.1 177 85.9
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.1e-78 297.4 229 68.6
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 3.1e-78 295.8 252 61.5
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.7e-76 290.0 177 83.6
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 1.4e-73 280.4 255 57.6
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 6.7e-73 278.1 280 54.3
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 3.3e-64 249.2 252 56.0
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.8e-62 243.4 254 52.8
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 4.5e-61 238.8 145 82.8
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 8.5e-60 234.6 146 81.5
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 4.4e-56 222.2 254 48.0
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 2.5e-51 206.5 123 83.7
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 1.8e-33 147.1 91 78.0
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 1.8e-33 147.1 86 87.2
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 3.0e-33 146.4 96 74.0
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 4.3e-27 125.9 83 78.3
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 3.1e-17 93.2 63 68.3
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.3e-12 77.8 48 79.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 5.2e-09 65.9 49 65.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.7e-07 60.8 34 79.4


User provided reference genes

Program Settings